Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
CDH12P55289 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.89□□□□□ -1.95
CDH12P55289 AL353743.1-202ENST00000431724 1695 ntBASIC2.88□□□□□ -1.95
CDH12P55289 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CDH12P55289 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
CDH12P55289 MTND5P7-201ENST00000413558 1798 ntBASIC2.88□□□□□ -1.95
CDH12P55289 SNORD62.1-201ENST00000362541 86 ntBASIC2.88□□□□□ -1.95
CDH12P55289 Y_RNA.151-201ENST00000363566 112 ntBASIC2.88□□□□□ -1.95
CDH12P55289 RNU6-827P-201ENST00000365553 106 ntBASIC2.88□□□□□ -1.95
CDH12P55289 DYNLT3P1-201ENST00000378574 347 ntBASIC2.88□□□□□ -1.95
CDH12P55289 Y_RNA.473-201ENST00000384333 102 ntBASIC2.88□□□□□ -1.95
CDH12P55289 RNU6-601P-201ENST00000384540 107 ntBASIC2.88□□□□□ -1.95
CDH12P55289 RNU6-306P-201ENST00000384617 107 ntBASIC2.88□□□□□ -1.95
CDH12P55289 U3.37-201ENST00000408528 213 ntBASIC2.88□□□□□ -1.95
CDH12P55289 RN7SKP58-201ENST00000411010 305 ntBASIC2.88□□□□□ -1.95
CDH12P55289 AL117339.3-201ENST00000418733 162 ntBASIC2.88□□□□□ -1.95
CDH12P55289 TOMM20P4-201ENST00000427861 435 ntBASIC2.88□□□□□ -1.95
CDH12P55289 AC097713.2-201ENST00000430199 356 ntBASIC2.88□□□□□ -1.95
CDH12P55289 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.88□□□□□ -1.95
CDH12P55289 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.88□□□□□ -1.95
CDH12P55289 AC034236.1-201ENST00000469891 373 ntBASIC2.88□□□□□ -1.95
CDH12P55289 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
CDH12P55289 AC002456.2-201ENST00000509356 380 ntBASIC2.88□□□□□ -1.95
CDH12P55289 AC116337.1-201ENST00000509680 687 ntBASIC2.88□□□□□ -1.95
CDH12P55289 AC113155.1-201ENST00000511141 769 ntBASIC2.88□□□□□ -1.95
CDH12P55289 RN7SKP43-201ENST00000516173 320 ntBASIC2.88□□□□□ -1.95
CDH12P55289 TRAV32-201ENST00000553993 340 ntBASIC2.88□□□□□ -1.95
CDH12P55289 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.88□□□□□ -1.95
CDH12P55289 AL451007.1-201ENST00000595491 289 ntBASIC2.88□□□□□ -1.95
CDH12P55289 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.88□□□□□ -1.95
CDH12P55289 AL160281.1-201ENST00000605307 311 ntBASIC2.88□□□□□ -1.95
CDH12P55289 AL161423.1-201ENST00000613700 262 ntBASIC2.88□□□□□ -1.95
CDH12P55289 MIR6134-201ENST00000617606 109 ntBASIC2.88□□□□□ -1.95
CDH12P55289 AC034229.5-201ENST00000624258 185 ntBASIC2.88□□□□□ -1.95
CDH12P55289 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.88□□□□□ -1.95
CDH12P55289 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CDH12P55289 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CDH12P55289 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CDH12P55289 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CDH12P55289 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CDH12P55289 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CDH12P55289 RNU6-942P-201ENST00000363002 107 ntBASIC2.87□□□□□ -1.95
CDH12P55289 RNU6-198P-201ENST00000384258 104 ntBASIC2.87□□□□□ -1.95
CDH12P55289 RNY4P36-201ENST00000391116 96 ntBASIC2.87□□□□□ -1.95
CDH12P55289 RNU6-1077P-201ENST00000410506 102 ntBASIC2.87□□□□□ -1.95
CDH12P55289 BMS1P22-201ENST00000414726 313 ntBASIC2.87□□□□□ -1.95
CDH12P55289 ATG3P1-201ENST00000419507 911 ntBASIC2.87□□□□□ -1.95
CDH12P55289 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.87□□□□□ -1.95
CDH12P55289 AC005300.1-201ENST00000428401 373 ntBASIC2.87□□□□□ -1.95
CDH12P55289 AC236972.2-201ENST00000434979 310 ntBASIC2.87□□□□□ -1.95
CDH12P55289 BTF3P15-201ENST00000455606 336 ntBASIC2.87□□□□□ -1.95
CDH12P55289 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.87□□□□□ -1.95
CDH12P55289 RNU6-1016P-201ENST00000516689 94 ntBASIC2.87□□□□□ -1.95
CDH12P55289 Y_RNA.701-201ENST00000516812 110 ntBASIC2.87□□□□□ -1.95
CDH12P55289 RNU6-1213P-201ENST00000517075 94 ntBASIC2.87□□□□□ -1.95
CDH12P55289 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.87□□□□□ -1.95
CDH12P55289 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.87□□□□□ -1.95
CDH12P55289 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.87□□□□□ -1.95
CDH12P55289 MIR3158-1-201ENST00000583596 81 ntBASIC2.87□□□□□ -1.95
CDH12P55289 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.87□□□□□ -1.95
CDH12P55289 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.87□□□□□ -1.95
CDH12P55289 AC126177.8-201ENST00000618339 1015 ntBASIC2.87□□□□□ -1.95
CDH12P55289 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.87□□□□□ -1.95
CDH12P55289 AC098657.3-201ENST00000620434 263 ntBASIC2.87□□□□□ -1.95
CDH12P55289 AC244517.12-201ENST00000623581 663 ntBASIC2.87□□□□□ -1.95
CDH12P55289 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CDH12P55289 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
CDH12P55289 AC108206.1-201ENST00000570186 4159 ntBASIC2.86□□□□□ -1.95
CDH12P55289 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CDH12P55289 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.86□□□□□ -1.95
CDH12P55289 RNU6-78P-201ENST00000362897 107 ntBASIC2.86□□□□□ -1.95
CDH12P55289 RNU6-428P-201ENST00000362942 107 ntBASIC2.86□□□□□ -1.95
CDH12P55289 RNU6-1188P-201ENST00000363795 107 ntBASIC2.86□□□□□ -1.95
CDH12P55289 SNORA51.4-201ENST00000364993 124 ntBASIC2.86□□□□□ -1.95
CDH12P55289 AL357075.1-201ENST00000404107 726 ntBASIC2.86□□□□□ -1.95
CDH12P55289 RNA5SP274-201ENST00000410484 108 ntBASIC2.86□□□□□ -1.95
CDH12P55289 AL030996.1-201ENST00000411430 235 ntBASIC2.86□□□□□ -1.95
CDH12P55289 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CDH12P55289 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.86□□□□□ -1.95
CDH12P55289 AL353705.1-201ENST00000433468 480 ntBASIC2.86□□□□□ -1.95
CDH12P55289 AC007677.1-201ENST00000445757 515 ntBASIC2.86□□□□□ -1.95
CDH12P55289 HMGN2P10-201ENST00000448085 265 ntBASIC2.86□□□□□ -1.95
CDH12P55289 AC013470.1-201ENST00000453438 462 ntBASIC2.86□□□□□ -1.95
CDH12P55289 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CDH12P55289 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.86□□□□□ -1.95
CDH12P55289 AC110794.1-201ENST00000505816 425 ntBASIC2.86□□□□□ -1.95
CDH12P55289 MTND4LP22-201ENST00000508209 276 ntBASIC2.86□□□□□ -1.95
CDH12P55289 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.86□□□□□ -1.95
CDH12P55289 AC026782.1-201ENST00000512952 449 ntBASIC2.86□□□□□ -1.95
CDH12P55289 SNORA67.7-201ENST00000516664 135 ntBASIC2.86□□□□□ -1.95
CDH12P55289 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.86□□□□□ -1.95
CDH12P55289 AC103996.1-201ENST00000555468 102 ntBASIC2.86□□□□□ -1.95
CDH12P55289 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.86□□□□□ -1.95
CDH12P55289 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.86□□□□□ -1.95
CDH12P55289 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.86□□□□□ -1.95
CDH12P55289 AC020895.1-201ENST00000595362 272 ntBASIC2.86□□□□□ -1.95
CDH12P55289 AP000787.2-201ENST00000604432 568 ntBASIC2.86□□□□□ -1.95
CDH12P55289 AL353621.2-201ENST00000605340 133 ntBASIC2.86□□□□□ -1.95
CDH12P55289 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.86□□□□□ -1.95
CDH12P55289 AC011890.2-201ENST00000613393 294 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 149.8 ms