Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.16□□□□□ -2.06
RFC4P35249 AP003122.4-201ENST00000530980 758 ntBASIC2.16□□□□□ -2.06
RFC4P35249 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.16□□□□□ -2.06
RFC4P35249 LRRC34P1-201ENST00000542742 915 ntBASIC2.16□□□□□ -2.06
RFC4P35249 AL121821.2-201ENST00000556081 394 ntBASIC2.16□□□□□ -2.06
RFC4P35249 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.16□□□□□ -2.06
RFC4P35249 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.16□□□□□ -2.06
RFC4P35249 AC109446.2-201ENST00000567872 497 ntBASIC2.16□□□□□ -2.06
RFC4P35249 MIR548AB-201ENST00000584917 84 ntBASIC2.16□□□□□ -2.06
RFC4P35249 AL022161.1-201ENST00000604390 213 ntBASIC2.16□□□□□ -2.06
RFC4P35249 AL138963.2-201ENST00000605137 226 ntBASIC2.16□□□□□ -2.06
RFC4P35249 AL031775.1-201ENST00000607014 887 ntBASIC2.16□□□□□ -2.06
RFC4P35249 uc_338.5-201ENST00000611839 155 ntBASIC2.16□□□□□ -2.06
RFC4P35249 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
RFC4P35249 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
RFC4P35249 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
RFC4P35249 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
RFC4P35249 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
RFC4P35249 AL391987.6-201ENST00000305671 199 ntBASIC2.15□□□□□ -2.07
RFC4P35249 RNA5SP138-201ENST00000365098 114 ntBASIC2.15□□□□□ -2.07
RFC4P35249 Y_RNA.327-201ENST00000365201 102 ntBASIC2.15□□□□□ -2.07
RFC4P35249 RNA5SP240-201ENST00000365355 128 ntBASIC2.15□□□□□ -2.07
RFC4P35249 RNU4-52P-201ENST00000384209 138 ntBASIC2.15□□□□□ -2.07
RFC4P35249 RNU6-817P-201ENST00000391083 104 ntBASIC2.15□□□□□ -2.07
RFC4P35249 HMGB3P2-201ENST00000411913 584 ntBASIC2.15□□□□□ -2.07
RFC4P35249 AC004965.1-201ENST00000413033 213 ntBASIC2.15□□□□□ -2.07
RFC4P35249 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.15□□□□□ -2.07
RFC4P35249 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.15□□□□□ -2.07
RFC4P35249 AL589872.1-201ENST00000426602 288 ntBASIC2.15□□□□□ -2.07
RFC4P35249 AL591212.2-201ENST00000433923 257 ntBASIC2.15□□□□□ -2.07
RFC4P35249 USP9YP12-201ENST00000450481 570 ntBASIC2.15□□□□□ -2.07
RFC4P35249 AL133217.1-201ENST00000450980 425 ntBASIC2.15□□□□□ -2.07
RFC4P35249 PMCHL2-203ENST00000457791 237 ntBASIC2.15□□□□□ -2.07
RFC4P35249 RNU6-953P-201ENST00000459154 107 ntBASIC2.15□□□□□ -2.07
RFC4P35249 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.15□□□□□ -2.07
RFC4P35249 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.15□□□□□ -2.07
RFC4P35249 RPS3AP22-201ENST00000488297 769 ntBASIC2.15□□□□□ -2.07
RFC4P35249 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.15□□□□□ -2.07
RFC4P35249 RNU2-10P-201ENST00000516375 211 ntBASIC2.15□□□□□ -2.07
RFC4P35249 SNORA31.25-201ENST00000517242 134 ntBASIC2.15□□□□□ -2.07
RFC4P35249 AC025755.1-201ENST00000521306 278 ntBASIC2.15□□□□□ -2.07
RFC4P35249 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.15□□□□□ -2.07
RFC4P35249 AC103987.3-201ENST00000582071 292 ntBASIC2.15□□□□□ -2.07
RFC4P35249 HMGN1P30-201ENST00000589286 268 ntBASIC2.15□□□□□ -2.07
RFC4P35249 AC091152.3-201ENST00000604227 325 ntBASIC2.15□□□□□ -2.07
RFC4P35249 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.15□□□□□ -2.07
RFC4P35249 RNU6-87P-201ENST00000607561 108 ntBASIC2.15□□□□□ -2.07
RFC4P35249 AC022893.3-201ENST00000607665 437 ntBASIC2.15□□□□□ -2.07
RFC4P35249 AL365204.3-201ENST00000612448 685 ntBASIC2.15□□□□□ -2.07
RFC4P35249 AC092140.2-201ENST00000618027 521 ntBASIC2.15□□□□□ -2.07
RFC4P35249 AL162373.1-201ENST00000620433 407 ntBASIC2.15□□□□□ -2.07
RFC4P35249 AC009878.1-201ENST00000621819 340 ntBASIC2.15□□□□□ -2.07
RFC4P35249 FRG1KP-201ENST00000623592 341 ntBASIC2.15□□□□□ -2.07
RFC4P35249 AF246928.1-201ENST00000623768 87 ntBASIC2.15□□□□□ -2.07
RFC4P35249 AC079248.2-201ENST00000623779 326 ntBASIC2.15□□□□□ -2.07
RFC4P35249 AC091932.3-201ENST00000624223 323 ntBASIC2.15□□□□□ -2.07
RFC4P35249 MTND5P42-201ENST00000637720 498 ntBASIC2.15□□□□□ -2.07
RFC4P35249 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
RFC4P35249 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
RFC4P35249 AC006026.1-201ENST00000444025 1803 ntBASIC2.14□□□□□ -2.07
RFC4P35249 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
RFC4P35249 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
RFC4P35249 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
RFC4P35249 SNORD56.2-201ENST00000363242 71 ntBASIC2.14□□□□□ -2.07
RFC4P35249 RNU4-1-201ENST00000363925 141 ntBASIC2.14□□□□□ -2.07
RFC4P35249 RNU6-553P-201ENST00000364047 96 ntBASIC2.14□□□□□ -2.07
RFC4P35249 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.14□□□□□ -2.07
RFC4P35249 AP000275.1-201ENST00000411943 390 ntBASIC2.14□□□□□ -2.07
RFC4P35249 OR51A5P-201ENST00000415429 942 ntBASIC2.14□□□□□ -2.07
RFC4P35249 MTND4P20-201ENST00000424125 869 ntBASIC2.14□□□□□ -2.07
RFC4P35249 AC119618.1-201ENST00000434191 222 ntBASIC2.14□□□□□ -2.07
RFC4P35249 RPL30P6-201ENST00000475925 342 ntBASIC2.14□□□□□ -2.07
RFC4P35249 AC022493.1-201ENST00000492984 337 ntBASIC2.14□□□□□ -2.07
RFC4P35249 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.14□□□□□ -2.07
RFC4P35249 Y_RNA.689-201ENST00000516589 107 ntBASIC2.14□□□□□ -2.07
RFC4P35249 RNU6-1183P-201ENST00000517054 60 ntBASIC2.14□□□□□ -2.07
RFC4P35249 Y_RNA.717-201ENST00000517106 92 ntBASIC2.14□□□□□ -2.07
RFC4P35249 AC009902.1-201ENST00000519351 183 ntBASIC2.14□□□□□ -2.07
RFC4P35249 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.14□□□□□ -2.07
RFC4P35249 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.14□□□□□ -2.07
RFC4P35249 AL355297.2-201ENST00000604792 129 ntBASIC2.14□□□□□ -2.07
RFC4P35249 Z99289.3-201ENST00000605586 594 ntBASIC2.14□□□□□ -2.07
RFC4P35249 AL360219.1-201ENST00000610230 366 ntBASIC2.14□□□□□ -2.07
RFC4P35249 AC122133.1-201ENST00000613964 233 ntBASIC2.14□□□□□ -2.07
RFC4P35249 AC091304.6-201ENST00000619761 202 ntBASIC2.14□□□□□ -2.07
RFC4P35249 MIR5739-201ENST00000619803 80 ntBASIC2.14□□□□□ -2.07
RFC4P35249 AC007494.3-201ENST00000624660 743 ntBASIC2.14□□□□□ -2.07
RFC4P35249 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
RFC4P35249 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.14□□□□□ -2.07
RFC4P35249 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
RFC4P35249 RNU6-39P-201ENST00000384344 107 ntBASIC2.13□□□□□ -2.07
RFC4P35249 MIR489-201ENST00000384923 84 ntBASIC2.13□□□□□ -2.07
RFC4P35249 MRPL42P2-201ENST00000403169 426 ntBASIC2.13□□□□□ -2.07
RFC4P35249 AL031577.2-201ENST00000404133 280 ntBASIC2.13□□□□□ -2.07
RFC4P35249 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.13□□□□□ -2.07
RFC4P35249 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.13□□□□□ -2.07
RFC4P35249 DNAJC19P4-201ENST00000440115 345 ntBASIC2.13□□□□□ -2.07
RFC4P35249 AC009238.1-201ENST00000442165 424 ntBASIC2.13□□□□□ -2.07
RFC4P35249 AC009237.6-201ENST00000446969 424 ntBASIC2.13□□□□□ -2.07
RFC4P35249 AC009474.2-201ENST00000451383 136 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms