Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 ARF4P2-201ENST00000430209 526 ntBASIC3.81□□□□□ -1.8
HOXC12P31275 RPL23AP22-201ENST00000437556 453 ntBASIC3.81□□□□□ -1.8
HOXC12P31275 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.81□□□□□ -1.8
HOXC12P31275 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.81□□□□□ -1.8
HOXC12P31275 RPL35AP15-201ENST00000468042 339 ntBASIC3.81□□□□□ -1.8
HOXC12P31275 AC097462.2-201ENST00000504623 481 ntBASIC3.81□□□□□ -1.8
HOXC12P31275 AC017037.1-201ENST00000508460 471 ntBASIC3.81□□□□□ -1.8
HOXC12P31275 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXC12P31275 AC091874.1-201ENST00000511402 339 ntBASIC3.81□□□□□ -1.8
HOXC12P31275 RNA5SP446-201ENST00000515955 82 ntBASIC3.81□□□□□ -1.8
HOXC12P31275 AC034114.1-201ENST00000520293 285 ntBASIC3.81□□□□□ -1.8
HOXC12P31275 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
HOXC12P31275 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXC12P31275 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.81□□□□□ -1.8
HOXC12P31275 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.81□□□□□ -1.8
HOXC12P31275 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.81□□□□□ -1.8
HOXC12P31275 AC010928.2-201ENST00000588017 287 ntBASIC3.81□□□□□ -1.8
HOXC12P31275 AC024220.1-201ENST00000603675 484 ntBASIC3.81□□□□□ -1.8
HOXC12P31275 MIR6076-201ENST00000617521 113 ntBASIC3.81□□□□□ -1.8
HOXC12P31275 AC103858.2-201ENST00000621471 543 ntBASIC3.81□□□□□ -1.8
HOXC12P31275 AC112484.5-201ENST00000624189 228 ntBASIC3.81□□□□□ -1.8
HOXC12P31275 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HOXC12P31275 AC233263.6-201ENST00000631132 1963 ntBASIC3.81□□□□□ -1.8
HOXC12P31275 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HOXC12P31275 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
HOXC12P31275 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HOXC12P31275 RLIMP1-201ENST00000339626 1680 ntBASIC3.81□□□□□ -1.8
HOXC12P31275 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
HOXC12P31275 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.81□□□□□ -1.8
HOXC12P31275 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HOXC12P31275 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HOXC12P31275 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HOXC12P31275 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HOXC12P31275 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HOXC12P31275 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HOXC12P31275 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.8□□□□□ -1.8
HOXC12P31275 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HOXC12P31275 MIR372-201ENST00000362225 67 ntBASIC3.8□□□□□ -1.8
HOXC12P31275 Y_RNA.27-201ENST00000362540 103 ntBASIC3.8□□□□□ -1.8
HOXC12P31275 RNA5SP22-201ENST00000365393 109 ntBASIC3.8□□□□□ -1.8
HOXC12P31275 RNA5SP283-201ENST00000365604 119 ntBASIC3.8□□□□□ -1.8
HOXC12P31275 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HOXC12P31275 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.8□□□□□ -1.8
HOXC12P31275 RNU6-1286P-201ENST00000383871 107 ntBASIC3.8□□□□□ -1.8
HOXC12P31275 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
HOXC12P31275 RPL21P75-201ENST00000396599 483 ntBASIC3.8□□□□□ -1.8
HOXC12P31275 RPL21P28-201ENST00000401418 483 ntBASIC3.8□□□□□ -1.8
HOXC12P31275 RNA5SP104-201ENST00000410989 118 ntBASIC3.8□□□□□ -1.8
HOXC12P31275 EIF1AXP1-201ENST00000419267 435 ntBASIC3.8□□□□□ -1.8
HOXC12P31275 AL590556.1-201ENST00000423231 483 ntBASIC3.8□□□□□ -1.8
HOXC12P31275 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.8□□□□□ -1.8
HOXC12P31275 RPL23AP82-202ENST00000427528 469 ntBASIC3.8□□□□□ -1.8
HOXC12P31275 AC005300.1-201ENST00000428401 373 ntBASIC3.8□□□□□ -1.8
HOXC12P31275 AC009296.1-201ENST00000443146 155 ntBASIC3.8□□□□□ -1.8
HOXC12P31275 AL590664.1-201ENST00000448065 339 ntBASIC3.8□□□□□ -1.8
HOXC12P31275 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.8□□□□□ -1.8
HOXC12P31275 RPL21P11-201ENST00000461458 483 ntBASIC3.8□□□□□ -1.8
HOXC12P31275 RPL21P39-201ENST00000463605 483 ntBASIC3.8□□□□□ -1.8
HOXC12P31275 RN7SL330P-201ENST00000469709 307 ntBASIC3.8□□□□□ -1.8
HOXC12P31275 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.8□□□□□ -1.8
HOXC12P31275 RPL30P14-201ENST00000482744 348 ntBASIC3.8□□□□□ -1.8
HOXC12P31275 AC087190.1-201ENST00000484462 480 ntBASIC3.8□□□□□ -1.8
HOXC12P31275 AC107032.1-201ENST00000485945 480 ntBASIC3.8□□□□□ -1.8
HOXC12P31275 AC132942.1-201ENST00000486753 483 ntBASIC3.8□□□□□ -1.8
HOXC12P31275 RPL30P1-201ENST00000488676 339 ntBASIC3.8□□□□□ -1.8
HOXC12P31275 AC093591.1-201ENST00000491435 481 ntBASIC3.8□□□□□ -1.8
HOXC12P31275 AC104564.1-201ENST00000493028 407 ntBASIC3.8□□□□□ -1.8
HOXC12P31275 RPL21P16-201ENST00000495531 483 ntBASIC3.8□□□□□ -1.8
HOXC12P31275 ANXA2P1-201ENST00000505539 926 ntBASIC3.8□□□□□ -1.8
HOXC12P31275 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HOXC12P31275 RNU6-408P-201ENST00000515910 100 ntBASIC3.8□□□□□ -1.8
HOXC12P31275 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.8□□□□□ -1.8
HOXC12P31275 AL442163.3-201ENST00000554110 156 ntBASIC3.8□□□□□ -1.8
HOXC12P31275 RPL21P7-201ENST00000557463 483 ntBASIC3.8□□□□□ -1.8
HOXC12P31275 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.8□□□□□ -1.8
HOXC12P31275 AC002076.2-201ENST00000617362 122 ntBASIC3.8□□□□□ -1.8
HOXC12P31275 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.8□□□□□ -1.8
HOXC12P31275 MIR8059-201ENST00000620427 81 ntBASIC3.8□□□□□ -1.8
HOXC12P31275 AC130454.1-201ENST00000622948 401 ntBASIC3.8□□□□□ -1.8
HOXC12P31275 MIR3199-2-201ENST00000636243 86 ntBASIC3.8□□□□□ -1.8
HOXC12P31275 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.8□□□□□ -1.8
HOXC12P31275 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HOXC12P31275 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
HOXC12P31275 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HOXC12P31275 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HOXC12P31275 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
HOXC12P31275 AC110491.1-201ENST00000562191 2010 ntBASIC3.8□□□□□ -1.8
HOXC12P31275 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
HOXC12P31275 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HOXC12P31275 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
HOXC12P31275 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
HOXC12P31275 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
HOXC12P31275 RNU6-379P-201ENST00000363813 104 ntBASIC3.79□□□□□ -1.8
HOXC12P31275 Y_RNA.376-201ENST00000365638 108 ntBASIC3.79□□□□□ -1.8
HOXC12P31275 RNU6-472P-201ENST00000384299 107 ntBASIC3.79□□□□□ -1.8
HOXC12P31275 MT-TW-201ENST00000387382 68 ntBASIC3.79□□□□□ -1.8
HOXC12P31275 PTMAP2-201ENST00000397627 327 ntBASIC3.79□□□□□ -1.8
HOXC12P31275 RPL23AP52-201ENST00000439311 478 ntBASIC3.79□□□□□ -1.8
HOXC12P31275 RPEP5-201ENST00000441137 268 ntBASIC3.79□□□□□ -1.8
HOXC12P31275 AC007969.2-201ENST00000441891 191 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 144.1 ms