Protein–RNA interactions for Protein: P22090

RPS4Y1, 40S ribosomal protein S4, Y isoform 1, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y1P22090 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.04□□□□□ -2.24
RPS4Y1P22090 AL121594.1-201ENST00000475906 575 ntBASIC1.04□□□□□ -2.24
RPS4Y1P22090 AC109927.2-201ENST00000506416 303 ntBASIC1.04□□□□□ -2.24
RPS4Y1P22090 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.04□□□□□ -2.24
RPS4Y1P22090 AC109329.1-201ENST00000518744 317 ntBASIC1.04□□□□□ -2.24
RPS4Y1P22090 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.04□□□□□ -2.24
RPS4Y1P22090 AP001004.1-201ENST00000582468 324 ntBASIC1.04□□□□□ -2.24
RPS4Y1P22090 BNIP3P27-201ENST00000599991 412 ntBASIC1.04□□□□□ -2.24
RPS4Y1P22090 AC093788.1-201ENST00000609356 927 ntBASIC1.04□□□□□ -2.24
RPS4Y1P22090 Z82243.1-201ENST00000609432 473 ntBASIC1.04□□□□□ -2.24
RPS4Y1P22090 MIR8074-201ENST00000615081 81 ntBASIC1.04□□□□□ -2.24
RPS4Y1P22090 AP003476.1-201ENST00000623984 516 ntBASIC1.04□□□□□ -2.24
RPS4Y1P22090 RNU6-288P-201ENST00000363690 104 ntBASIC1.03□□□□□ -2.24
RPS4Y1P22090 RNU6-546P-201ENST00000383991 107 ntBASIC1.03□□□□□ -2.24
RPS4Y1P22090 RNU6-439P-201ENST00000384188 106 ntBASIC1.03□□□□□ -2.24
RPS4Y1P22090 Y_RNA.534-201ENST00000384599 112 ntBASIC1.03□□□□□ -2.24
RPS4Y1P22090 RN7SKP266-201ENST00000410232 287 ntBASIC1.03□□□□□ -2.24
RPS4Y1P22090 RNA5SP100-201ENST00000410903 110 ntBASIC1.03□□□□□ -2.24
RPS4Y1P22090 RNA5SP59-201ENST00000410922 110 ntBASIC1.03□□□□□ -2.24
RPS4Y1P22090 SRIP3-201ENST00000413200 219 ntBASIC1.03□□□□□ -2.24
RPS4Y1P22090 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.03□□□□□ -2.24
RPS4Y1P22090 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.03□□□□□ -2.24
RPS4Y1P22090 RPS6P15-201ENST00000431996 751 ntBASIC1.03□□□□□ -2.24
RPS4Y1P22090 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.03□□□□□ -2.24
RPS4Y1P22090 CR769776.1-201ENST00000441254 787 ntBASIC1.03□□□□□ -2.24
RPS4Y1P22090 NEFMP1-201ENST00000443423 1006 ntBASIC1.03□□□□□ -2.24
RPS4Y1P22090 FTH1P25-201ENST00000447665 469 ntBASIC1.03□□□□□ -2.24
RPS4Y1P22090 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.03□□□□□ -2.24
RPS4Y1P22090 MED28P2-201ENST00000475771 317 ntBASIC1.03□□□□□ -2.24
RPS4Y1P22090 AC132942.1-201ENST00000486753 483 ntBASIC1.03□□□□□ -2.24
RPS4Y1P22090 AC021146.8-201ENST00000507455 733 ntBASIC1.03□□□□□ -2.24
RPS4Y1P22090 RNU6-143P-201ENST00000516942 93 ntBASIC1.03□□□□□ -2.24
RPS4Y1P22090 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.03□□□□□ -2.24
RPS4Y1P22090 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
RPS4Y1P22090 DEFB108A-201ENST00000530110 222 ntBASIC1.03□□□□□ -2.24
RPS4Y1P22090 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.03□□□□□ -2.24
RPS4Y1P22090 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.03□□□□□ -2.24
RPS4Y1P22090 AC022616.8-201ENST00000533569 253 ntBASIC1.03□□□□□ -2.24
RPS4Y1P22090 MIR4498-201ENST00000577599 66 ntBASIC1.03□□□□□ -2.24
RPS4Y1P22090 AP001981.2-201ENST00000603241 418 ntBASIC1.03□□□□□ -2.24
RPS4Y1P22090 AC016727.1-205ENST00000605437 569 ntBASIC1.03□□□□□ -2.24
RPS4Y1P22090 AC012360.2-201ENST00000609349 391 ntBASIC1.03□□□□□ -2.24
RPS4Y1P22090 MIR6078-201ENST00000611069 100 ntBASIC1.03□□□□□ -2.24
RPS4Y1P22090 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.03□□□□□ -2.24
RPS4Y1P22090 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.03□□□□□ -2.24
RPS4Y1P22090 uc_338.15-201ENST00000615470 191 ntBASIC1.03□□□□□ -2.24
RPS4Y1P22090 AC123767.1-202ENST00000620407 817 ntBASIC1.03□□□□□ -2.24
RPS4Y1P22090 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.03□□□□□ -2.24
RPS4Y1P22090 FARSBP1-201ENST00000435808 1778 ntBASIC1.03□□□□□ -2.24
RPS4Y1P22090 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
RPS4Y1P22090 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.02□□□□□ -2.25
RPS4Y1P22090 RNU6-560P-201ENST00000364007 108 ntBASIC1.02□□□□□ -2.25
RPS4Y1P22090 Y_RNA.311-201ENST00000365068 96 ntBASIC1.02□□□□□ -2.25
RPS4Y1P22090 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
RPS4Y1P22090 RNU1-78P-201ENST00000391248 165 ntBASIC1.02□□□□□ -2.25
RPS4Y1P22090 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.02□□□□□ -2.25
RPS4Y1P22090 MTND4P25-201ENST00000441039 533 ntBASIC1.02□□□□□ -2.25
RPS4Y1P22090 AC112492.4-201ENST00000456549 352 ntBASIC1.02□□□□□ -2.25
RPS4Y1P22090 Y_RNA.638-201ENST00000459374 113 ntBASIC1.02□□□□□ -2.25
RPS4Y1P22090 AC099513.1-201ENST00000490423 301 ntBASIC1.02□□□□□ -2.25
RPS4Y1P22090 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.02□□□□□ -2.25
RPS4Y1P22090 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.02□□□□□ -2.25
RPS4Y1P22090 MTND1P36-201ENST00000522384 936 ntBASIC1.02□□□□□ -2.25
RPS4Y1P22090 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.02□□□□□ -2.25
RPS4Y1P22090 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.02□□□□□ -2.25
RPS4Y1P22090 AC025678.1-201ENST00000567861 338 ntBASIC1.02□□□□□ -2.25
RPS4Y1P22090 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.02□□□□□ -2.25
RPS4Y1P22090 WISP1-OT1-201ENST00000602893 642 ntBASIC1.02□□□□□ -2.25
RPS4Y1P22090 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
RPS4Y1P22090 AC112220.2-201ENST00000605513 533 ntBASIC1.02□□□□□ -2.25
RPS4Y1P22090 AC245297.2-201ENST00000610119 565 ntBASIC1.02□□□□□ -2.25
RPS4Y1P22090 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.02□□□□□ -2.25
RPS4Y1P22090 AC004908.3-201ENST00000610248 625 ntBASIC1.02□□□□□ -2.25
RPS4Y1P22090 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.02□□□□□ -2.25
RPS4Y1P22090 AC009269.6-201ENST00000621778 588 ntBASIC1.02□□□□□ -2.25
RPS4Y1P22090 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.02□□□□□ -2.25
RPS4Y1P22090 AL512643.1-201ENST00000635735 524 ntBASIC1.02□□□□□ -2.25
RPS4Y1P22090 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
RPS4Y1P22090 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.01□□□□□ -2.25
RPS4Y1P22090 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
RPS4Y1P22090 SNORA63.3-201ENST00000362682 132 ntBASIC1.01□□□□□ -2.25
RPS4Y1P22090 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
RPS4Y1P22090 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
RPS4Y1P22090 RNU6-843P-201ENST00000384454 104 ntBASIC1.01□□□□□ -2.25
RPS4Y1P22090 SNORA48.1-201ENST00000390879 135 ntBASIC1.01□□□□□ -2.25
RPS4Y1P22090 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC1.01□□□□□ -2.25
RPS4Y1P22090 AC016831.2-201ENST00000417179 352 ntBASIC1.01□□□□□ -2.25
RPS4Y1P22090 AC138623.1-201ENST00000418060 216 ntBASIC1.01□□□□□ -2.25
RPS4Y1P22090 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.01□□□□□ -2.25
RPS4Y1P22090 RAC1P6-201ENST00000423911 575 ntBASIC1.01□□□□□ -2.25
RPS4Y1P22090 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.01□□□□□ -2.25
RPS4Y1P22090 AL591704.1-201ENST00000432574 275 ntBASIC1.01□□□□□ -2.25
RPS4Y1P22090 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.01□□□□□ -2.25
RPS4Y1P22090 USP9YP35-201ENST00000435696 412 ntBASIC1.01□□□□□ -2.25
RPS4Y1P22090 RPS29P28-201ENST00000446439 141 ntBASIC1.01□□□□□ -2.25
RPS4Y1P22090 snoU13.9-201ENST00000458927 103 ntBASIC1.01□□□□□ -2.25
RPS4Y1P22090 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.01□□□□□ -2.25
RPS4Y1P22090 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.01□□□□□ -2.25
RPS4Y1P22090 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.01□□□□□ -2.25
RPS4Y1P22090 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms