Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.14□□□□□ -1.59
COL9A1P20849 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
COL9A1P20849 RNU6-756P-201ENST00000383997 107 ntBASIC5.14□□□□□ -1.59
COL9A1P20849 RNU6-1181P-201ENST00000384191 106 ntBASIC5.14□□□□□ -1.59
COL9A1P20849 SNORA68.2-201ENST00000391263 128 ntBASIC5.14□□□□□ -1.59
COL9A1P20849 RPS3AP1-201ENST00000413190 320 ntBASIC5.14□□□□□ -1.59
COL9A1P20849 CYCSP48-201ENST00000417124 323 ntBASIC5.14□□□□□ -1.59
COL9A1P20849 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
COL9A1P20849 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC5.14□□□□□ -1.59
COL9A1P20849 Y_RNA.685-201ENST00000516532 108 ntBASIC5.14□□□□□ -1.59
COL9A1P20849 AC099778.2-201ENST00000610904 211 ntBASIC5.14□□□□□ -1.59
COL9A1P20849 SNX18P1Y-201ENST00000616231 511 ntBASIC5.14□□□□□ -1.59
COL9A1P20849 AC005562.2-201ENST00000618264 111 ntBASIC5.14□□□□□ -1.59
COL9A1P20849 SCARNA15.3-201ENST00000626315 122 ntBASIC5.14□□□□□ -1.59
COL9A1P20849 SCARNA4.1-201ENST00000628597 123 ntBASIC5.14□□□□□ -1.59
COL9A1P20849 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
COL9A1P20849 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.14□□□□□ -1.59
COL9A1P20849 AC007159.1-201ENST00000566529 4706 ntBASIC5.14□□□□□ -1.59
COL9A1P20849 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.14□□□□□ -1.59
COL9A1P20849 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.14□□□□□ -1.59
COL9A1P20849 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COL9A1P20849 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL9A1P20849 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.14□□□□□ -1.59
COL9A1P20849 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC5.13□□□□□ -1.59
COL9A1P20849 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
COL9A1P20849 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL9A1P20849 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL9A1P20849 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC5.13□□□□□ -1.59
COL9A1P20849 AL596211.1-201ENST00000569873 2277 ntBASIC5.13□□□□□ -1.59
COL9A1P20849 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.13□□□□□ -1.59
COL9A1P20849 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
COL9A1P20849 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
COL9A1P20849 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
COL9A1P20849 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COL9A1P20849 TLK1P1-201ENST00000456760 2440 ntBASIC5.13□□□□□ -1.59
COL9A1P20849 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COL9A1P20849 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC5.13□□□□□ -1.59
COL9A1P20849 U3.8-201ENST00000363675 217 ntBASIC5.13□□□□□ -1.59
COL9A1P20849 Y_RNA.328-201ENST00000365208 113 ntBASIC5.13□□□□□ -1.59
COL9A1P20849 RN7SKP101-201ENST00000411376 320 ntBASIC5.13□□□□□ -1.59
COL9A1P20849 GOT2P5-201ENST00000433995 546 ntBASIC5.13□□□□□ -1.59
COL9A1P20849 APOA2-205ENST00000468465 421 ntTSL 2 BASIC5.13□□□□□ -1.59
COL9A1P20849 RN7SL814P-201ENST00000487715 300 ntBASIC5.13□□□□□ -1.59
COL9A1P20849 AC005868.1-201ENST00000536421 331 ntBASIC5.13□□□□□ -1.59
COL9A1P20849 AL451007.1-201ENST00000595491 289 ntBASIC5.13□□□□□ -1.59
COL9A1P20849 AP003357.1-201ENST00000604497 148 ntBASIC5.13□□□□□ -1.59
COL9A1P20849 AL023881.1-201ENST00000621088 301 ntBASIC5.13□□□□□ -1.59
COL9A1P20849 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL9A1P20849 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC5.13□□□□□ -1.59
COL9A1P20849 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.13□□□□□ -1.59
COL9A1P20849 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.13□□□□□ -1.59
COL9A1P20849 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL9A1P20849 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL9A1P20849 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL9A1P20849 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL9A1P20849 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL9A1P20849 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
COL9A1P20849 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL9A1P20849 Y_RNA.587-201ENST00000391210 103 ntBASIC5.12□□□□□ -1.59
COL9A1P20849 PPIAP31-201ENST00000405422 495 ntBASIC5.12□□□□□ -1.59
COL9A1P20849 MIR1302-5-201ENST00000408164 150 ntBASIC5.12□□□□□ -1.59
COL9A1P20849 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.12□□□□□ -1.59
COL9A1P20849 AC005300.1-201ENST00000428401 373 ntBASIC5.12□□□□□ -1.59
COL9A1P20849 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.12□□□□□ -1.59
COL9A1P20849 SRIP1-201ENST00000489235 288 ntBASIC5.12□□□□□ -1.59
COL9A1P20849 RPL30P5-201ENST00000494923 336 ntBASIC5.12□□□□□ -1.59
COL9A1P20849 SNORA40.13-201ENST00000516379 120 ntBASIC5.12□□□□□ -1.59
COL9A1P20849 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC5.12□□□□□ -1.59
COL9A1P20849 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.12□□□□□ -1.59
COL9A1P20849 RMST_8.1-201ENST00000610287 165 ntBASIC5.12□□□□□ -1.59
COL9A1P20849 AC096577.2-201ENST00000611455 153 ntBASIC5.12□□□□□ -1.59
COL9A1P20849 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.12□□□□□ -1.59
COL9A1P20849 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL9A1P20849 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL9A1P20849 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL9A1P20849 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL9A1P20849 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL9A1P20849 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL9A1P20849 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
COL9A1P20849 AC026523.2-201ENST00000625039 7739 ntBASIC5.12□□□□□ -1.59
COL9A1P20849 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL9A1P20849 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.12□□□□□ -1.59
COL9A1P20849 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
COL9A1P20849 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
COL9A1P20849 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
COL9A1P20849 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC5.11□□□□□ -1.59
COL9A1P20849 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL9A1P20849 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.11□□□□□ -1.59
COL9A1P20849 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL9A1P20849 OR56B2P-202ENST00000641377 2453 ntBASIC5.11□□□□□ -1.59
COL9A1P20849 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
COL9A1P20849 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL9A1P20849 SPRR2C-201ENST00000290702 219 ntBASIC5.11□□□□□ -1.59
COL9A1P20849 RNA5SP432-201ENST00000362480 116 ntBASIC5.11□□□□□ -1.59
COL9A1P20849 RN7SKP153-201ENST00000365026 316 ntBASIC5.11□□□□□ -1.59
COL9A1P20849 RNU6-49P-201ENST00000384256 107 ntBASIC5.11□□□□□ -1.59
COL9A1P20849 MIR518C-201ENST00000384822 101 ntBASIC5.11□□□□□ -1.59
COL9A1P20849 RNA5SP317-201ENST00000410176 116 ntBASIC5.11□□□□□ -1.59
COL9A1P20849 RNA5SP504-201ENST00000410676 117 ntBASIC5.11□□□□□ -1.59
COL9A1P20849 RNA5SP311-201ENST00000411290 116 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms