Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 RN7SL93P-201ENST00000463035 293 ntBASIC4.52□□□□□ -1.69
LIG1P18858 RPS20P22-201ENST00000473700 357 ntBASIC4.52□□□□□ -1.69
LIG1P18858 AL049830.2-201ENST00000480072 201 ntBASIC4.52□□□□□ -1.69
LIG1P18858 RN7SL271P-201ENST00000487601 295 ntBASIC4.52□□□□□ -1.69
LIG1P18858 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
LIG1P18858 SCARNA15.2-201ENST00000516409 127 ntBASIC4.52□□□□□ -1.69
LIG1P18858 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.52□□□□□ -1.69
LIG1P18858 AL442163.3-201ENST00000554110 156 ntBASIC4.52□□□□□ -1.69
LIG1P18858 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.52□□□□□ -1.69
LIG1P18858 FAM60BP-201ENST00000578364 658 ntBASIC4.52□□□□□ -1.69
LIG1P18858 AL020997.2-201ENST00000602607 184 ntBASIC4.52□□□□□ -1.69
LIG1P18858 AC010900.2-201ENST00000604508 210 ntBASIC4.52□□□□□ -1.69
LIG1P18858 AL591424.2-201ENST00000617023 128 ntBASIC4.52□□□□□ -1.69
LIG1P18858 RNA5SP196-201ENST00000625967 102 ntBASIC4.52□□□□□ -1.69
LIG1P18858 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC4.52□□□□□ -1.69
LIG1P18858 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC4.52□□□□□ -1.69
LIG1P18858 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.52□□□□□ -1.69
LIG1P18858 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LIG1P18858 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
LIG1P18858 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
LIG1P18858 snoU2_19.2-201ENST00000363024 80 ntBASIC4.51□□□□□ -1.69
LIG1P18858 SNORD81.1-201ENST00000363064 77 ntBASIC4.51□□□□□ -1.69
LIG1P18858 RNA5SP399-201ENST00000364003 117 ntBASIC4.51□□□□□ -1.69
LIG1P18858 U1.1-201ENST00000384101 164 ntBASIC4.51□□□□□ -1.69
LIG1P18858 MIR215-201ENST00000384858 110 ntBASIC4.51□□□□□ -1.69
LIG1P18858 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
LIG1P18858 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.51□□□□□ -1.69
LIG1P18858 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.51□□□□□ -1.69
LIG1P18858 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LIG1P18858 AC083863.1-201ENST00000438811 231 ntBASIC4.51□□□□□ -1.69
LIG1P18858 HMGB1P37-201ENST00000439613 609 ntBASIC4.51□□□□□ -1.69
LIG1P18858 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LIG1P18858 AL136097.1-201ENST00000456945 913 ntBASIC4.51□□□□□ -1.69
LIG1P18858 AC087190.1-201ENST00000484462 480 ntBASIC4.51□□□□□ -1.69
LIG1P18858 AC107032.1-201ENST00000485945 480 ntBASIC4.51□□□□□ -1.69
LIG1P18858 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.51□□□□□ -1.69
LIG1P18858 RNU6-612P-201ENST00000516909 102 ntBASIC4.51□□□□□ -1.69
LIG1P18858 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.51□□□□□ -1.69
LIG1P18858 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.51□□□□□ -1.69
LIG1P18858 ATP5F1P5-201ENST00000526403 760 ntBASIC4.51□□□□□ -1.69
LIG1P18858 AC103996.1-201ENST00000555468 102 ntBASIC4.51□□□□□ -1.69
LIG1P18858 AL645944.1-201ENST00000603857 493 ntBASIC4.51□□□□□ -1.69
LIG1P18858 5S_rRNA.12-201ENST00000617631 107 ntBASIC4.51□□□□□ -1.69
LIG1P18858 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LIG1P18858 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LIG1P18858 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
LIG1P18858 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LIG1P18858 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.51□□□□□ -1.69
LIG1P18858 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LIG1P18858 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LIG1P18858 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.5□□□□□ -1.69
LIG1P18858 U3.6-201ENST00000363622 211 ntBASIC4.5□□□□□ -1.69
LIG1P18858 RNU6-280P-201ENST00000364145 104 ntBASIC4.5□□□□□ -1.69
LIG1P18858 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LIG1P18858 MIR190B-201ENST00000401119 79 ntBASIC4.5□□□□□ -1.69
LIG1P18858 MRPL35P1-201ENST00000404272 572 ntBASIC4.5□□□□□ -1.69
LIG1P18858 MIR1251-201ENST00000408552 70 ntBASIC4.5□□□□□ -1.69
LIG1P18858 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.5□□□□□ -1.69
LIG1P18858 Z85995.1-201ENST00000415547 335 ntBASIC4.5□□□□□ -1.69
LIG1P18858 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.5□□□□□ -1.69
LIG1P18858 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.5□□□□□ -1.69
LIG1P18858 RPL17P36-201ENST00000420302 549 ntBASIC4.5□□□□□ -1.69
LIG1P18858 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LIG1P18858 AL513124.1-201ENST00000450410 614 ntBASIC4.5□□□□□ -1.69
LIG1P18858 AL139109.1-201ENST00000455491 297 ntBASIC4.5□□□□□ -1.69
LIG1P18858 MED28P2-201ENST00000475771 317 ntBASIC4.5□□□□□ -1.69
LIG1P18858 AL132838.2-201ENST00000492041 314 ntBASIC4.5□□□□□ -1.69
LIG1P18858 RNU4-71P-201ENST00000516258 113 ntBASIC4.5□□□□□ -1.69
LIG1P18858 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.5□□□□□ -1.69
LIG1P18858 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.5□□□□□ -1.69
LIG1P18858 AC104581.2-201ENST00000572227 430 ntBASIC4.5□□□□□ -1.69
LIG1P18858 MIR3160-1-201ENST00000577972 85 ntBASIC4.5□□□□□ -1.69
LIG1P18858 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.5□□□□□ -1.69
LIG1P18858 VN1R85P-201ENST00000601587 426 ntBASIC4.5□□□□□ -1.69
LIG1P18858 SRGNP1-201ENST00000603392 451 ntBASIC4.5□□□□□ -1.69
LIG1P18858 MIR6868-201ENST00000611215 58 ntBASIC4.5□□□□□ -1.69
LIG1P18858 AL161629.2-201ENST00000615347 275 ntBASIC4.5□□□□□ -1.69
LIG1P18858 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.5□□□□□ -1.69
LIG1P18858 U2.22-201ENST00000636441 106 ntBASIC4.5□□□□□ -1.69
LIG1P18858 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LIG1P18858 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.5□□□□□ -1.69
LIG1P18858 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LIG1P18858 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.49□□□□□ -1.69
LIG1P18858 Y_RNA.439-201ENST00000384119 94 ntBASIC4.49□□□□□ -1.69
LIG1P18858 SNORA12.2-201ENST00000391040 156 ntBASIC4.49□□□□□ -1.69
LIG1P18858 AL603910.2-201ENST00000407268 136 ntBASIC4.49□□□□□ -1.69
LIG1P18858 AL691449.1-201ENST00000426570 421 ntBASIC4.49□□□□□ -1.69
LIG1P18858 TBCAP1-201ENST00000436520 327 ntBASIC4.49□□□□□ -1.69
LIG1P18858 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LIG1P18858 snoU13.4-201ENST00000458916 104 ntBASIC4.49□□□□□ -1.69
LIG1P18858 RPS29P27-201ENST00000463711 170 ntBASIC4.49□□□□□ -1.69
LIG1P18858 AL160314.1-201ENST00000490836 438 ntBASIC4.49□□□□□ -1.69
LIG1P18858 AC010469.2-201ENST00000496412 480 ntBASIC4.49□□□□□ -1.69
LIG1P18858 MLLT10P2-201ENST00000506434 249 ntBASIC4.49□□□□□ -1.69
LIG1P18858 AC026784.1-201ENST00000507986 352 ntBASIC4.49□□□□□ -1.69
LIG1P18858 RNA5SP468-201ENST00000516782 93 ntBASIC4.49□□□□□ -1.69
LIG1P18858 MIR2355-201ENST00000517199 87 ntBASIC4.49□□□□□ -1.69
LIG1P18858 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.49□□□□□ -1.69
LIG1P18858 AC008121.1-201ENST00000603244 268 ntBASIC4.49□□□□□ -1.69
LIG1P18858 BX284668.6-201ENST00000606899 438 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms