Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 TIMM9P1-201ENST00000436122 256 ntBASIC1.45□□□□□ -2.18
TPM1P09493 AC007677.1-201ENST00000445757 515 ntBASIC1.45□□□□□ -2.18
TPM1P09493 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.45□□□□□ -2.18
TPM1P09493 AL583843.1-201ENST00000456070 346 ntBASIC1.45□□□□□ -2.18
TPM1P09493 AL139824.2-201ENST00000458731 1095 ntBASIC1.45□□□□□ -2.18
TPM1P09493 AP001025.1-201ENST00000486139 332 ntBASIC1.45□□□□□ -2.18
TPM1P09493 AC099513.1-201ENST00000490423 301 ntBASIC1.45□□□□□ -2.18
TPM1P09493 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.45□□□□□ -2.18
TPM1P09493 SNORA31.17-201ENST00000516953 127 ntBASIC1.45□□□□□ -2.18
TPM1P09493 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
TPM1P09493 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.45□□□□□ -2.18
TPM1P09493 AC023813.2-201ENST00000564321 469 ntBASIC1.45□□□□□ -2.18
TPM1P09493 MIR26B-201ENST00000362251 77 ntBASIC1.44□□□□□ -2.18
TPM1P09493 RNU4-13P-201ENST00000364019 141 ntBASIC1.44□□□□□ -2.18
TPM1P09493 SNORA75B-201ENST00000384053 137 ntBASIC1.44□□□□□ -2.18
TPM1P09493 MTCO1P44-201ENST00000441935 243 ntBASIC1.44□□□□□ -2.18
TPM1P09493 AC245517.4-201ENST00000448601 281 ntBASIC1.44□□□□□ -2.18
TPM1P09493 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.44□□□□□ -2.18
TPM1P09493 RPL31P58-201ENST00000469001 379 ntBASIC1.44□□□□□ -2.18
TPM1P09493 RPL30P6-201ENST00000475925 342 ntBASIC1.44□□□□□ -2.18
TPM1P09493 AC010409.1-201ENST00000487382 476 ntBASIC1.44□□□□□ -2.18
TPM1P09493 AC068620.3-201ENST00000602749 560 ntBASIC1.44□□□□□ -2.18
TPM1P09493 AC123912.5-201ENST00000605470 343 ntBASIC1.44□□□□□ -2.18
TPM1P09493 AC130324.3-201ENST00000614165 542 ntBASIC1.44□□□□□ -2.18
TPM1P09493 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
TPM1P09493 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.43□□□□□ -2.18
TPM1P09493 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
TPM1P09493 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
TPM1P09493 RNU6-298P-201ENST00000390888 96 ntBASIC1.43□□□□□ -2.18
TPM1P09493 SNORA67.5-201ENST00000391036 107 ntBASIC1.43□□□□□ -2.18
TPM1P09493 RNU6-174P-201ENST00000410406 106 ntBASIC1.43□□□□□ -2.18
TPM1P09493 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.43□□□□□ -2.18
TPM1P09493 LARP1BP3-201ENST00000437229 869 ntBASIC1.43□□□□□ -2.18
TPM1P09493 AL117351.1-201ENST00000438864 766 ntBASIC1.43□□□□□ -2.18
TPM1P09493 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.43□□□□□ -2.18
TPM1P09493 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.43□□□□□ -2.18
TPM1P09493 AC093899.1-201ENST00000457984 376 ntBASIC1.43□□□□□ -2.18
TPM1P09493 AC116337.1-201ENST00000509680 687 ntBASIC1.43□□□□□ -2.18
TPM1P09493 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.43□□□□□ -2.18
TPM1P09493 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.43□□□□□ -2.18
TPM1P09493 AC068338.1-201ENST00000565567 176 ntBASIC1.43□□□□□ -2.18
TPM1P09493 AC002400.1-201ENST00000569310 726 ntBASIC1.43□□□□□ -2.18
TPM1P09493 VN1R82P-201ENST00000601481 356 ntBASIC1.43□□□□□ -2.18
TPM1P09493 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.43□□□□□ -2.18
TPM1P09493 AL121895.2-201ENST00000619558 447 ntBASIC1.43□□□□□ -2.18
TPM1P09493 ZNF29P-201ENST00000225587 168 ntBASIC1.42□□□□□ -2.18
TPM1P09493 RNU6-72P-201ENST00000384285 79 ntBASIC1.42□□□□□ -2.18
TPM1P09493 Y_RNA.472-201ENST00000384322 102 ntBASIC1.42□□□□□ -2.18
TPM1P09493 RNU6-160P-201ENST00000384591 107 ntBASIC1.42□□□□□ -2.18
TPM1P09493 RNU2-72P-201ENST00000411175 163 ntBASIC1.42□□□□□ -2.18
TPM1P09493 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.42□□□□□ -2.18
TPM1P09493 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC1.42□□□□□ -2.18
TPM1P09493 AL353752.1-201ENST00000454946 260 ntBASIC1.42□□□□□ -2.18
TPM1P09493 AC132942.1-201ENST00000486753 483 ntBASIC1.42□□□□□ -2.18
TPM1P09493 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.42□□□□□ -2.18
TPM1P09493 RNA5SP445-201ENST00000515889 115 ntBASIC1.42□□□□□ -2.18
TPM1P09493 RNU6-902P-201ENST00000517212 91 ntBASIC1.42□□□□□ -2.18
TPM1P09493 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.42□□□□□ -2.18
TPM1P09493 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.42□□□□□ -2.18
TPM1P09493 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.42□□□□□ -2.18
TPM1P09493 TRAV32-201ENST00000553993 340 ntBASIC1.42□□□□□ -2.18
TPM1P09493 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.42□□□□□ -2.18
TPM1P09493 SUB1P4-201ENST00000566062 339 ntBASIC1.42□□□□□ -2.18
TPM1P09493 MIR3169-201ENST00000578032 83 ntBASIC1.42□□□□□ -2.18
TPM1P09493 MIR4513-201ENST00000581077 86 ntBASIC1.42□□□□□ -2.18
TPM1P09493 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.42□□□□□ -2.18
TPM1P09493 AC174048.1-201ENST00000603389 144 ntBASIC1.42□□□□□ -2.18
TPM1P09493 RNU6-88P-201ENST00000606801 100 ntBASIC1.42□□□□□ -2.18
TPM1P09493 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
TPM1P09493 FRG1KP-201ENST00000623592 341 ntBASIC1.42□□□□□ -2.18
TPM1P09493 MIR1248-201ENST00000629190 106 ntBASIC1.42□□□□□ -2.18
TPM1P09493 AC008993.2-201ENST00000631744 806 ntBASIC1.42□□□□□ -2.18
TPM1P09493 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
TPM1P09493 RNU6-212P-201ENST00000362642 104 ntBASIC1.41□□□□□ -2.18
TPM1P09493 RNA5SP493-201ENST00000364115 91 ntBASIC1.41□□□□□ -2.18
TPM1P09493 RNA5SP390-201ENST00000410191 113 ntBASIC1.41□□□□□ -2.18
TPM1P09493 RNU2-41P-201ENST00000410991 178 ntBASIC1.41□□□□□ -2.18
TPM1P09493 Y_RNA.623-201ENST00000411128 95 ntBASIC1.41□□□□□ -2.18
TPM1P09493 ELOCP17-201ENST00000414751 326 ntBASIC1.41□□□□□ -2.18
TPM1P09493 ELOCP9-201ENST00000418624 239 ntBASIC1.41□□□□□ -2.18
TPM1P09493 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.41□□□□□ -2.18
TPM1P09493 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.41□□□□□ -2.18
TPM1P09493 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.41□□□□□ -2.18
TPM1P09493 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.41□□□□□ -2.18
TPM1P09493 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
TPM1P09493 RPL23AP35-201ENST00000451906 501 ntBASIC1.41□□□□□ -2.18
TPM1P09493 RNU1-123P-201ENST00000458950 160 ntBASIC1.41□□□□□ -2.18
TPM1P09493 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC1.41□□□□□ -2.18
TPM1P09493 AC112198.4-201ENST00000515450 351 ntBASIC1.41□□□□□ -2.18
TPM1P09493 RNU6-991P-201ENST00000516168 107 ntBASIC1.41□□□□□ -2.18
TPM1P09493 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.41□□□□□ -2.18
TPM1P09493 AC103987.3-201ENST00000582071 292 ntBASIC1.41□□□□□ -2.18
TPM1P09493 KC877982.1-201ENST00000602313 470 ntBASIC1.41□□□□□ -2.18
TPM1P09493 AL645939.4-201ENST00000604495 135 ntBASIC1.41□□□□□ -2.18
TPM1P09493 MIR15A-201ENST00000607334 83 ntBASIC1.41□□□□□ -2.18
TPM1P09493 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.41□□□□□ -2.18
TPM1P09493 AC233981.2-201ENST00000611524 1614 ntBASIC1.4□□□□□ -2.18
TPM1P09493 RNU6-271P-201ENST00000363858 105 ntBASIC1.4□□□□□ -2.19
TPM1P09493 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC1.4□□□□□ -2.19
TPM1P09493 TXNL1P1-201ENST00000429528 554 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms