Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 AP006437.1-201ENST00000641440 3685 ntBASIC1.56□□□□□ -2.16
MT-ND4P03905 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
MT-ND4P03905 RNU5F-7P-201ENST00000363696 115 ntBASIC1.56□□□□□ -2.16
MT-ND4P03905 U3.13-201ENST00000364804 214 ntBASIC1.56□□□□□ -2.16
MT-ND4P03905 SNORA72.3-201ENST00000365074 132 ntBASIC1.56□□□□□ -2.16
MT-ND4P03905 RNU6-843P-201ENST00000384454 104 ntBASIC1.56□□□□□ -2.16
MT-ND4P03905 RNU1-57P-201ENST00000384491 166 ntBASIC1.56□□□□□ -2.16
MT-ND4P03905 MIR10A-201ENST00000385043 110 ntBASIC1.56□□□□□ -2.16
MT-ND4P03905 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
MT-ND4P03905 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
MT-ND4P03905 RNA5SP450-201ENST00000411206 102 ntBASIC1.56□□□□□ -2.16
MT-ND4P03905 AC138623.1-201ENST00000418060 216 ntBASIC1.56□□□□□ -2.16
MT-ND4P03905 AL158823.1-201ENST00000418441 478 ntBASIC1.56□□□□□ -2.16
MT-ND4P03905 ELOCP4-201ENST00000420090 333 ntBASIC1.56□□□□□ -2.16
MT-ND4P03905 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.56□□□□□ -2.16
MT-ND4P03905 HSPE1P21-201ENST00000438283 308 ntBASIC1.56□□□□□ -2.16
MT-ND4P03905 CALM1P1-201ENST00000442082 433 ntBASIC1.56□□□□□ -2.16
MT-ND4P03905 USP9YP15-201ENST00000442391 422 ntBASIC1.56□□□□□ -2.16
MT-ND4P03905 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.56□□□□□ -2.16
MT-ND4P03905 NDUFB1P2-201ENST00000449477 176 ntBASIC1.56□□□□□ -2.16
MT-ND4P03905 USP9YP12-201ENST00000450481 570 ntBASIC1.56□□□□□ -2.16
MT-ND4P03905 BZW1P2-201ENST00000473537 826 ntBASIC1.56□□□□□ -2.16
MT-ND4P03905 AC010486.1-201ENST00000511793 424 ntBASIC1.56□□□□□ -2.16
MT-ND4P03905 AC119751.5-201ENST00000514077 770 ntBASIC1.56□□□□□ -2.16
MT-ND4P03905 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.56□□□□□ -2.16
MT-ND4P03905 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.56□□□□□ -2.16
MT-ND4P03905 MIR548AC-201ENST00000585049 88 ntBASIC1.56□□□□□ -2.16
MT-ND4P03905 AC073410.2-201ENST00000603240 332 ntBASIC1.56□□□□□ -2.16
MT-ND4P03905 AL138889.2-201ENST00000603883 242 ntBASIC1.56□□□□□ -2.16
MT-ND4P03905 AC112191.3-201ENST00000604371 277 ntBASIC1.56□□□□□ -2.16
MT-ND4P03905 AC021646.1-201ENST00000605469 484 ntBASIC1.56□□□□□ -2.16
MT-ND4P03905 AC004223.4-201ENST00000612426 332 ntBASIC1.56□□□□□ -2.16
MT-ND4P03905 AL773524.1-201ENST00000614065 229 ntBASIC1.56□□□□□ -2.16
MT-ND4P03905 MIR3529-201ENST00000637713 78 ntBASIC1.56□□□□□ -2.16
MT-ND4P03905 Y_RNA.22-201ENST00000362492 102 ntBASIC1.55□□□□□ -2.16
MT-ND4P03905 MIR578-201ENST00000384828 96 ntBASIC1.55□□□□□ -2.16
MT-ND4P03905 MIR558-201ENST00000384920 94 ntBASIC1.55□□□□□ -2.16
MT-ND4P03905 MIR186-201ENST00000384988 86 ntBASIC1.55□□□□□ -2.16
MT-ND4P03905 MIR561-201ENST00000385216 97 ntBASIC1.55□□□□□ -2.16
MT-ND4P03905 RN7SKP192-201ENST00000411291 327 ntBASIC1.55□□□□□ -2.16
MT-ND4P03905 UBE2V1P10-201ENST00000414685 269 ntBASIC1.55□□□□□ -2.16
MT-ND4P03905 HIGD1AP15-201ENST00000416198 280 ntBASIC1.55□□□□□ -2.16
MT-ND4P03905 RPS24P1-201ENST00000438550 371 ntBASIC1.55□□□□□ -2.16
MT-ND4P03905 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.55□□□□□ -2.16
MT-ND4P03905 HMGB1P30-201ENST00000492455 606 ntBASIC1.55□□□□□ -2.16
MT-ND4P03905 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.55□□□□□ -2.16
MT-ND4P03905 RBBP4P6-201ENST00000508098 202 ntBASIC1.55□□□□□ -2.16
MT-ND4P03905 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC1.55□□□□□ -2.16
MT-ND4P03905 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
MT-ND4P03905 AC107393.1-201ENST00000512403 346 ntBASIC1.55□□□□□ -2.16
MT-ND4P03905 RNU6-1129P-201ENST00000515964 104 ntBASIC1.55□□□□□ -2.16
MT-ND4P03905 RNU6-1220P-201ENST00000517126 108 ntBASIC1.55□□□□□ -2.16
MT-ND4P03905 AC034114.1-201ENST00000520293 285 ntBASIC1.55□□□□□ -2.16
MT-ND4P03905 AP004607.1-201ENST00000524456 203 ntBASIC1.55□□□□□ -2.16
MT-ND4P03905 AC022878.1-201ENST00000530684 149 ntBASIC1.55□□□□□ -2.16
MT-ND4P03905 AC093249.1-201ENST00000567049 203 ntBASIC1.55□□□□□ -2.16
MT-ND4P03905 AL022161.1-201ENST00000604390 213 ntBASIC1.55□□□□□ -2.16
MT-ND4P03905 AL139286.2-201ENST00000606838 396 ntBASIC1.55□□□□□ -2.16
MT-ND4P03905 AL451064.1-201ENST00000607718 471 ntBASIC1.55□□□□□ -2.16
MT-ND4P03905 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
MT-ND4P03905 RNU6-1010P-201ENST00000362757 107 ntBASIC1.54□□□□□ -2.16
MT-ND4P03905 RNU6-384P-201ENST00000364900 104 ntBASIC1.54□□□□□ -2.16
MT-ND4P03905 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.54□□□□□ -2.16
MT-ND4P03905 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
MT-ND4P03905 RNU6-622P-201ENST00000384272 103 ntBASIC1.54□□□□□ -2.16
MT-ND4P03905 RNU6-1179P-201ENST00000384667 107 ntBASIC1.54□□□□□ -2.16
MT-ND4P03905 AC019129.1-201ENST00000403786 261 ntBASIC1.54□□□□□ -2.16
MT-ND4P03905 RNU2-39P-201ENST00000410604 198 ntBASIC1.54□□□□□ -2.16
MT-ND4P03905 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC1.54□□□□□ -2.16
MT-ND4P03905 MED13P1-201ENST00000428342 171 ntBASIC1.54□□□□□ -2.16
MT-ND4P03905 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.54□□□□□ -2.16
MT-ND4P03905 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.54□□□□□ -2.16
MT-ND4P03905 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.54□□□□□ -2.16
MT-ND4P03905 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.54□□□□□ -2.16
MT-ND4P03905 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.54□□□□□ -2.16
MT-ND4P03905 RPL21P99-201ENST00000480369 423 ntBASIC1.54□□□□□ -2.16
MT-ND4P03905 AP001025.1-201ENST00000486139 332 ntBASIC1.54□□□□□ -2.16
MT-ND4P03905 AC117522.1-201ENST00000509821 380 ntBASIC1.54□□□□□ -2.16
MT-ND4P03905 RNU2-53P-201ENST00000516257 147 ntBASIC1.54□□□□□ -2.16
MT-ND4P03905 Y_RNA.672-201ENST00000516289 104 ntBASIC1.54□□□□□ -2.16
MT-ND4P03905 AC022616.3-201ENST00000523940 148 ntBASIC1.54□□□□□ -2.16
MT-ND4P03905 CR383656.8-201ENST00000549046 145 ntBASIC1.54□□□□□ -2.16
MT-ND4P03905 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.54□□□□□ -2.16
MT-ND4P03905 RPL21P5-201ENST00000554662 472 ntBASIC1.54□□□□□ -2.16
MT-ND4P03905 AC009094.1-201ENST00000564443 426 ntBASIC1.54□□□□□ -2.16
MT-ND4P03905 MIR4648-201ENST00000580107 72 ntBASIC1.54□□□□□ -2.16
MT-ND4P03905 MIR3618-201ENST00000580330 88 ntBASIC1.54□□□□□ -2.16
MT-ND4P03905 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
MT-ND4P03905 AL031274.2-201ENST00000599419 203 ntBASIC1.54□□□□□ -2.16
MT-ND4P03905 AC022022.2-201ENST00000602989 360 ntBASIC1.54□□□□□ -2.16
MT-ND4P03905 AL078605.1-201ENST00000603529 500 ntBASIC1.54□□□□□ -2.16
MT-ND4P03905 AC098614.4-201ENST00000607601 462 ntBASIC1.54□□□□□ -2.16
MT-ND4P03905 U6.42-201ENST00000618440 107 ntBASIC1.54□□□□□ -2.16
MT-ND4P03905 AC008121.3-201ENST00000618726 433 ntBASIC1.54□□□□□ -2.16
MT-ND4P03905 AL391262.2-201ENST00000622466 494 ntBASIC1.54□□□□□ -2.16
MT-ND4P03905 AL157786.1-207ENST00000627771 695 ntBASIC1.54□□□□□ -2.16
MT-ND4P03905 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
MT-ND4P03905 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
MT-ND4P03905 RNU6-529P-201ENST00000363383 104 ntBASIC1.53□□□□□ -2.16
MT-ND4P03905 RNU6-61P-201ENST00000365528 109 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms