Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 RNU6-140P-201ENST00000384566 108 ntBASIC0.21□□□□□ -2.38
POLR1AO95602 MIR19B1-201ENST00000384829 87 ntBASIC0.21□□□□□ -2.38
POLR1AO95602 RPS3AP36-201ENST00000398190 775 ntBASIC0.21□□□□□ -2.38
POLR1AO95602 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC0.21□□□□□ -2.38
POLR1AO95602 HMGN3P1-201ENST00000453847 193 ntBASIC0.21□□□□□ -2.38
POLR1AO95602 LARP1BP2-201ENST00000486594 519 ntBASIC0.21□□□□□ -2.38
POLR1AO95602 AC010409.1-201ENST00000487382 476 ntBASIC0.21□□□□□ -2.38
POLR1AO95602 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC0.21□□□□□ -2.38
POLR1AO95602 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC0.21□□□□□ -2.38
POLR1AO95602 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.21□□□□□ -2.38
POLR1AO95602 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC0.21□□□□□ -2.38
POLR1AO95602 AC009268.1-201ENST00000561352 1203 ntBASIC0.21□□□□□ -2.38
POLR1AO95602 AC090079.2-201ENST00000575289 768 ntBASIC0.21□□□□□ -2.38
POLR1AO95602 AC016542.1-201ENST00000608259 493 ntBASIC0.21□□□□□ -2.38
POLR1AO95602 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
POLR1AO95602 RNU6-110P-201ENST00000384508 104 ntBASIC0.21□□□□□ -2.38
POLR1AO95602 AC114482.1-201ENST00000418010 247 ntBASIC0.21□□□□□ -2.38
POLR1AO95602 EIF1P1-201ENST00000421436 341 ntBASIC0.21□□□□□ -2.38
POLR1AO95602 AC139712.2-201ENST00000424302 339 ntBASIC0.21□□□□□ -2.38
POLR1AO95602 GTF2IP13-201ENST00000438487 386 ntBASIC0.21□□□□□ -2.38
POLR1AO95602 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC0.21□□□□□ -2.38
POLR1AO95602 HMGN1P13-201ENST00000505795 138 ntBASIC0.21□□□□□ -2.38
POLR1AO95602 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC0.21□□□□□ -2.38
POLR1AO95602 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC0.21□□□□□ -2.38
POLR1AO95602 CLIC4P2-201ENST00000601934 717 ntBASIC0.21□□□□□ -2.38
POLR1AO95602 AC021851.1-201ENST00000608537 1082 ntBASIC0.21□□□□□ -2.38
POLR1AO95602 MIR8063-201ENST00000621930 81 ntBASIC0.21□□□□□ -2.38
POLR1AO95602 Y_RNA.170-201ENST00000363746 110 ntBASIC0.2□□□□□ -2.38
POLR1AO95602 AL590383.1-201ENST00000428602 75 ntBASIC0.2□□□□□ -2.38
POLR1AO95602 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC0.2□□□□□ -2.38
POLR1AO95602 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC0.2□□□□□ -2.38
POLR1AO95602 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.2□□□□□ -2.38
POLR1AO95602 AC090142.3-201ENST00000519012 385 ntBASIC0.2□□□□□ -2.38
POLR1AO95602 AP001893.2-201ENST00000526949 202 ntBASIC0.2□□□□□ -2.38
POLR1AO95602 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC0.2□□□□□ -2.38
POLR1AO95602 AP005229.2-201ENST00000609980 697 ntBASIC0.2□□□□□ -2.38
POLR1AO95602 AC040168.1-201ENST00000623594 991 ntBASIC0.2□□□□□ -2.38
POLR1AO95602 AL159152.1-201ENST00000635019 2587 ntBASIC0.2□□□□□ -2.38
POLR1AO95602 RNU6-884P-201ENST00000363889 107 ntBASIC0.19□□□□□ -2.38
POLR1AO95602 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
POLR1AO95602 AC018868.1-201ENST00000491307 315 ntBASIC0.19□□□□□ -2.38
POLR1AO95602 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC0.19□□□□□ -2.38
POLR1AO95602 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.19□□□□□ -2.38
POLR1AO95602 RNU6-1256P-201ENST00000516539 103 ntBASIC0.19□□□□□ -2.38
POLR1AO95602 COPS8P3-201ENST00000526024 482 ntBASIC0.19□□□□□ -2.38
POLR1AO95602 CR383656.7-201ENST00000548164 174 ntBASIC0.19□□□□□ -2.38
POLR1AO95602 Z83818.1-201ENST00000603584 150 ntBASIC0.19□□□□□ -2.38
POLR1AO95602 Pinc.1-201ENST00000616452 154 ntBASIC0.19□□□□□ -2.38
POLR1AO95602 AL109659.3-201ENST00000624985 950 ntBASIC0.19□□□□□ -2.38
POLR1AO95602 Z75746.1-201ENST00000440243 2080 ntBASIC0.19□□□□□ -2.38
POLR1AO95602 Y_RNA.136-201ENST00000363444 102 ntBASIC0.18□□□□□ -2.38
POLR1AO95602 SNORD114-24-201ENST00000365029 72 ntBASIC0.18□□□□□ -2.38
POLR1AO95602 AC092634.6-201ENST00000418558 192 ntBASIC0.18□□□□□ -2.38
POLR1AO95602 AC098831.1-201ENST00000440661 216 ntBASIC0.18□□□□□ -2.38
POLR1AO95602 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.18□□□□□ -2.38
POLR1AO95602 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.18□□□□□ -2.38
POLR1AO95602 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.18□□□□□ -2.38
POLR1AO95602 AC068790.6-201ENST00000602558 258 ntBASIC0.18□□□□□ -2.38
POLR1AO95602 BBIP1P1-201ENST00000602999 279 ntBASIC0.18□□□□□ -2.38
POLR1AO95602 MIR6134-201ENST00000617606 109 ntBASIC0.18□□□□□ -2.38
POLR1AO95602 AC009509.4-201ENST00000619202 509 ntBASIC0.18□□□□□ -2.38
POLR1AO95602 MTND5P31-201ENST00000419366 1374 ntBASIC0.18□□□□□ -2.38
POLR1AO95602 RNU6-31P-201ENST00000384388 108 ntBASIC0.18□□□□□ -2.38
POLR1AO95602 RPL36AP53-201ENST00000432891 316 ntBASIC0.18□□□□□ -2.38
POLR1AO95602 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC0.18□□□□□ -2.38
POLR1AO95602 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC0.18□□□□□ -2.38
POLR1AO95602 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.18□□□□□ -2.38
POLR1AO95602 RNA5SP134-201ENST00000516492 96 ntBASIC0.18□□□□□ -2.38
POLR1AO95602 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.18□□□□□ -2.38
POLR1AO95602 AP003066.2-201ENST00000529375 555 ntBASIC0.18□□□□□ -2.38
POLR1AO95602 AC018618.2-201ENST00000604770 446 ntBASIC0.18□□□□□ -2.38
POLR1AO95602 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.18□□□□□ -2.38
POLR1AO95602 MIR6516-201ENST00000630554 81 ntBASIC0.18□□□□□ -2.38
POLR1AO95602 GDI2P1-201ENST00000429312 1336 ntBASIC0.17□□□□□ -2.38
POLR1AO95602 MTCYBP32-201ENST00000427945 1084 ntBASIC0.17□□□□□ -2.38
POLR1AO95602 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.17□□□□□ -2.38
POLR1AO95602 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC0.17□□□□□ -2.38
POLR1AO95602 Z82210.1-201ENST00000440037 231 ntBASIC0.17□□□□□ -2.38
POLR1AO95602 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.17□□□□□ -2.38
POLR1AO95602 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC0.17□□□□□ -2.38
POLR1AO95602 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.17□□□□□ -2.38
POLR1AO95602 AC009950.2-201ENST00000636548 183 ntBASIC0.17□□□□□ -2.38
POLR1AO95602 RNU5A-1-201ENST00000362698 116 ntBASIC0.16□□□□□ -2.38
POLR1AO95602 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
POLR1AO95602 AL591034.2-201ENST00000402839 359 ntBASIC0.16□□□□□ -2.38
POLR1AO95602 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC0.16□□□□□ -2.38
POLR1AO95602 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.16□□□□□ -2.38
POLR1AO95602 RPL26P6-201ENST00000440913 438 ntBASIC0.16□□□□□ -2.38
POLR1AO95602 RNU6-197P-201ENST00000516680 100 ntBASIC0.16□□□□□ -2.38
POLR1AO95602 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.16□□□□□ -2.38
POLR1AO95602 AC008088.1-201ENST00000580993 280 ntBASIC0.16□□□□□ -2.38
POLR1AO95602 AC090578.1-201ENST00000604955 591 ntBASIC0.16□□□□□ -2.38
POLR1AO95602 UBE2Q2P6-201ENST00000612666 153 ntBASIC0.16□□□□□ -2.38
POLR1AO95602 AC008993.2-201ENST00000631744 806 ntBASIC0.16□□□□□ -2.38
POLR1AO95602 MIR1262-201ENST00000408276 93 ntBASIC0.16□□□□□ -2.38
POLR1AO95602 AL161935.2-201ENST00000414627 60 ntBASIC0.16□□□□□ -2.38
POLR1AO95602 RPS26P5-201ENST00000418544 335 ntBASIC0.16□□□□□ -2.38
POLR1AO95602 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.16□□□□□ -2.38
POLR1AO95602 GAPDHP17-201ENST00000449858 1001 ntBASIC0.16□□□□□ -2.38
POLR1AO95602 BET1P1-201ENST00000482276 359 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 140.6 ms