Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 PGBD4P6-201ENST00000421501 610 ntBASIC3.41□□□□□ -1.86
VPS4BO75351 TMEM167AP1-201ENST00000423409 219 ntBASIC3.41□□□□□ -1.86
VPS4BO75351 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.41□□□□□ -1.86
VPS4BO75351 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
VPS4BO75351 AC007560.1-201ENST00000426912 237 ntBASIC3.41□□□□□ -1.86
VPS4BO75351 AC236972.1-201ENST00000433225 199 ntBASIC3.41□□□□□ -1.86
VPS4BO75351 BX679664.1-201ENST00000434429 253 ntBASIC3.41□□□□□ -1.86
VPS4BO75351 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.41□□□□□ -1.86
VPS4BO75351 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.41□□□□□ -1.86
VPS4BO75351 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
VPS4BO75351 RPL30P15-201ENST00000457129 321 ntBASIC3.41□□□□□ -1.86
VPS4BO75351 RPS4XP2-201ENST00000458402 793 ntBASIC3.41□□□□□ -1.86
VPS4BO75351 AP001486.1-201ENST00000463339 476 ntBASIC3.41□□□□□ -1.86
VPS4BO75351 RPL23AP45-201ENST00000476406 468 ntBASIC3.41□□□□□ -1.86
VPS4BO75351 AC107934.2-201ENST00000518653 310 ntBASIC3.41□□□□□ -1.86
VPS4BO75351 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
VPS4BO75351 HIGD1AP1-201ENST00000550979 275 ntBASIC3.41□□□□□ -1.86
VPS4BO75351 TRAV32-201ENST00000553993 340 ntBASIC3.41□□□□□ -1.86
VPS4BO75351 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.41□□□□□ -1.86
VPS4BO75351 RNU6-6P-201ENST00000606623 107 ntBASIC3.41□□□□□ -1.86
VPS4BO75351 MIR7851-201ENST00000610611 160 ntBASIC3.41□□□□□ -1.86
VPS4BO75351 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.41□□□□□ -1.86
VPS4BO75351 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
VPS4BO75351 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
VPS4BO75351 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
VPS4BO75351 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.86
VPS4BO75351 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
VPS4BO75351 SRP72P2-201ENST00000344851 1979 ntBASIC3.4□□□□□ -1.86
VPS4BO75351 RNU6-1115P-201ENST00000362490 106 ntBASIC3.4□□□□□ -1.87
VPS4BO75351 Y_RNA.151-201ENST00000363566 112 ntBASIC3.4□□□□□ -1.87
VPS4BO75351 Y_RNA.162-201ENST00000363683 102 ntBASIC3.4□□□□□ -1.87
VPS4BO75351 RNU1-73P-201ENST00000383971 164 ntBASIC3.4□□□□□ -1.87
VPS4BO75351 RNU6-1040P-201ENST00000383974 107 ntBASIC3.4□□□□□ -1.87
VPS4BO75351 RNU6-842P-201ENST00000384269 107 ntBASIC3.4□□□□□ -1.87
VPS4BO75351 RNU6-306P-201ENST00000384617 107 ntBASIC3.4□□□□□ -1.87
VPS4BO75351 MIR518D-201ENST00000385014 87 ntBASIC3.4□□□□□ -1.87
VPS4BO75351 MIR34A-201ENST00000385130 110 ntBASIC3.4□□□□□ -1.87
VPS4BO75351 RNA5SP120-201ENST00000410900 112 ntBASIC3.4□□□□□ -1.87
VPS4BO75351 RN7SKP53-201ENST00000411337 315 ntBASIC3.4□□□□□ -1.87
VPS4BO75351 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.4□□□□□ -1.87
VPS4BO75351 PMCHL1-202ENST00000423102 261 ntBASIC3.4□□□□□ -1.87
VPS4BO75351 RPL23AP82-202ENST00000427528 469 ntBASIC3.4□□□□□ -1.87
VPS4BO75351 AL133396.1-201ENST00000432048 687 ntBASIC3.4□□□□□ -1.87
VPS4BO75351 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.4□□□□□ -1.87
VPS4BO75351 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.4□□□□□ -1.87
VPS4BO75351 CENPBD1P1-201ENST00000464061 469 ntBASIC3.4□□□□□ -1.87
VPS4BO75351 AC090096.1-201ENST00000489168 390 ntBASIC3.4□□□□□ -1.87
VPS4BO75351 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.4□□□□□ -1.87
VPS4BO75351 PTP4A1P4-201ENST00000512479 322 ntBASIC3.4□□□□□ -1.87
VPS4BO75351 RNU6-1183P-201ENST00000517054 60 ntBASIC3.4□□□□□ -1.87
VPS4BO75351 AC109479.2-201ENST00000517842 174 ntBASIC3.4□□□□□ -1.87
VPS4BO75351 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.4□□□□□ -1.87
VPS4BO75351 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.4□□□□□ -1.87
VPS4BO75351 SNRPGP18-201ENST00000553000 214 ntBASIC3.4□□□□□ -1.87
VPS4BO75351 H3F3AP1-201ENST00000559984 334 ntBASIC3.4□□□□□ -1.87
VPS4BO75351 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.4□□□□□ -1.87
VPS4BO75351 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.4□□□□□ -1.87
VPS4BO75351 AC007823.1-201ENST00000569932 1566 ntBASIC3.4□□□□□ -1.87
VPS4BO75351 AC078795.3-201ENST00000602913 472 ntBASIC3.4□□□□□ -1.87
VPS4BO75351 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
VPS4BO75351 AC019193.3-201ENST00000609144 554 ntBASIC3.4□□□□□ -1.87
VPS4BO75351 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.4□□□□□ -1.87
VPS4BO75351 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.4□□□□□ -1.87
VPS4BO75351 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
VPS4BO75351 AC017071.1-201ENST00000564407 2204 ntBASIC3.4□□□□□ -1.87
VPS4BO75351 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.4□□□□□ -1.87
VPS4BO75351 AL136164.4-201ENST00000625013 2135 ntBASIC3.4□□□□□ -1.87
VPS4BO75351 AL513302.2-201ENST00000562313 1842 ntBASIC3.4□□□□□ -1.87
VPS4BO75351 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.4□□□□□ -1.87
VPS4BO75351 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
VPS4BO75351 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.39□□□□□ -1.87
VPS4BO75351 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.39□□□□□ -1.87
VPS4BO75351 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.39□□□□□ -1.87
VPS4BO75351 AC007496.3-201ENST00000624987 3443 ntBASIC3.39□□□□□ -1.87
VPS4BO75351 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.39□□□□□ -1.87
VPS4BO75351 Y_RNA.445-201ENST00000384168 102 ntBASIC3.39□□□□□ -1.87
VPS4BO75351 RNU6-72P-201ENST00000384285 79 ntBASIC3.39□□□□□ -1.87
VPS4BO75351 SNORA1.3-201ENST00000384676 136 ntBASIC3.39□□□□□ -1.87
VPS4BO75351 MIR517A-201ENST00000385001 87 ntBASIC3.39□□□□□ -1.87
VPS4BO75351 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
VPS4BO75351 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
VPS4BO75351 AC018865.2-201ENST00000423631 129 ntBASIC3.39□□□□□ -1.87
VPS4BO75351 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.39□□□□□ -1.87
VPS4BO75351 AC098831.1-201ENST00000440661 216 ntBASIC3.39□□□□□ -1.87
VPS4BO75351 DAP3P1-201ENST00000441522 278 ntBASIC3.39□□□□□ -1.87
VPS4BO75351 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.39□□□□□ -1.87
VPS4BO75351 HMGB3P8-201ENST00000449709 577 ntBASIC3.39□□□□□ -1.87
VPS4BO75351 RNU6-1037P-201ENST00000459571 107 ntBASIC3.39□□□□□ -1.87
VPS4BO75351 RPL7P42-201ENST00000481005 679 ntBASIC3.39□□□□□ -1.87
VPS4BO75351 AL163540.1-201ENST00000485382 386 ntBASIC3.39□□□□□ -1.87
VPS4BO75351 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
VPS4BO75351 RPL23AP94-201ENST00000512518 302 ntBASIC3.39□□□□□ -1.87
VPS4BO75351 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.39□□□□□ -1.87
VPS4BO75351 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.39□□□□□ -1.87
VPS4BO75351 MIR3124-201ENST00000582636 67 ntBASIC3.39□□□□□ -1.87
VPS4BO75351 AL121917.1-203ENST00000605534 577 ntBASIC3.39□□□□□ -1.87
VPS4BO75351 AL161629.2-201ENST00000615347 275 ntBASIC3.39□□□□□ -1.87
VPS4BO75351 PISRT1.1-201ENST00000616930 107 ntBASIC3.39□□□□□ -1.87
VPS4BO75351 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.39□□□□□ -1.87
VPS4BO75351 MIR6852-201ENST00000621699 66 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 166.9 ms