Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
SSNA1O43805 RNA5SP216-201ENST00000516111 123 ntBASIC1.08□□□□□ -2.24
SSNA1O43805 AC009712.1-201ENST00000564938 316 ntBASIC1.08□□□□□ -2.24
SSNA1O43805 AC015720.1-201ENST00000565251 277 ntBASIC1.08□□□□□ -2.24
SSNA1O43805 MIR4255-201ENST00000579351 72 ntBASIC1.08□□□□□ -2.24
SSNA1O43805 VN1R82P-201ENST00000601481 356 ntBASIC1.08□□□□□ -2.24
SSNA1O43805 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.08□□□□□ -2.24
SSNA1O43805 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.08□□□□□ -2.24
SSNA1O43805 AP000943.4-201ENST00000622912 357 ntBASIC1.08□□□□□ -2.24
SSNA1O43805 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
SSNA1O43805 AC068205.3-201ENST00000636385 468 ntBASIC1.08□□□□□ -2.24
SSNA1O43805 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
SSNA1O43805 ZNF72P-201ENST00000425869 1908 ntBASIC1.08□□□□□ -2.24
SSNA1O43805 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.08□□□□□ -2.24
SSNA1O43805 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
SSNA1O43805 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
SSNA1O43805 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
SSNA1O43805 RNA5SP387-201ENST00000364226 106 ntBASIC1.07□□□□□ -2.24
SSNA1O43805 SNORD1A-201ENST00000364968 72 ntBASIC1.07□□□□□ -2.24
SSNA1O43805 RNU6-190P-201ENST00000384154 102 ntBASIC1.07□□□□□ -2.24
SSNA1O43805 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.07□□□□□ -2.24
SSNA1O43805 ELOCP17-201ENST00000414751 326 ntBASIC1.07□□□□□ -2.24
SSNA1O43805 ELOCP9-201ENST00000418624 239 ntBASIC1.07□□□□□ -2.24
SSNA1O43805 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.07□□□□□ -2.24
SSNA1O43805 AL358453.1-201ENST00000422522 250 ntBASIC1.07□□□□□ -2.24
SSNA1O43805 HMGB3P12-201ENST00000438745 556 ntBASIC1.07□□□□□ -2.24
SSNA1O43805 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.07□□□□□ -2.24
SSNA1O43805 SNORD97-201ENST00000459187 142 ntBASIC1.07□□□□□ -2.24
SSNA1O43805 YWHAEP4-201ENST00000505390 198 ntBASIC1.07□□□□□ -2.24
SSNA1O43805 AC009646.1-201ENST00000510455 318 ntBASIC1.07□□□□□ -2.24
SSNA1O43805 SNORA25.15-201ENST00000516487 89 ntBASIC1.07□□□□□ -2.24
SSNA1O43805 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.07□□□□□ -2.24
SSNA1O43805 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.07□□□□□ -2.24
SSNA1O43805 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.07□□□□□ -2.24
SSNA1O43805 AC012414.6-201ENST00000568241 401 ntBASIC1.07□□□□□ -2.24
SSNA1O43805 AC137800.2-201ENST00000574375 120 ntBASIC1.07□□□□□ -2.24
SSNA1O43805 AC025754.2-201ENST00000606491 432 ntBASIC1.07□□□□□ -2.24
SSNA1O43805 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.07□□□□□ -2.24
SSNA1O43805 AC120349.3-201ENST00000624377 529 ntBASIC1.07□□□□□ -2.24
SSNA1O43805 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.07□□□□□ -2.24
SSNA1O43805 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
SSNA1O43805 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
SSNA1O43805 RNU6-413P-201ENST00000384115 107 ntBASIC1.06□□□□□ -2.24
SSNA1O43805 RNU6-939P-201ENST00000384634 107 ntBASIC1.06□□□□□ -2.24
SSNA1O43805 MIR491-201ENST00000384877 84 ntBASIC1.06□□□□□ -2.24
SSNA1O43805 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.06□□□□□ -2.24
SSNA1O43805 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC1.06□□□□□ -2.24
SSNA1O43805 CBX3P6-201ENST00000430257 527 ntBASIC1.06□□□□□ -2.24
SSNA1O43805 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.06□□□□□ -2.24
SSNA1O43805 AC008549.1-201ENST00000512900 643 ntBASIC1.06□□□□□ -2.24
SSNA1O43805 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.06□□□□□ -2.24
SSNA1O43805 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC1.06□□□□□ -2.24
SSNA1O43805 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.06□□□□□ -2.24
SSNA1O43805 AP003122.4-201ENST00000530980 758 ntBASIC1.06□□□□□ -2.24
SSNA1O43805 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
SSNA1O43805 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.06□□□□□ -2.24
SSNA1O43805 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
SSNA1O43805 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.06□□□□□ -2.24
SSNA1O43805 AC023813.2-201ENST00000564321 469 ntBASIC1.06□□□□□ -2.24
SSNA1O43805 AC005786.1-201ENST00000588553 154 ntBASIC1.06□□□□□ -2.24
SSNA1O43805 AC022022.2-201ENST00000602989 360 ntBASIC1.06□□□□□ -2.24
SSNA1O43805 BCRP9-201ENST00000605312 388 ntBASIC1.06□□□□□ -2.24
SSNA1O43805 AL121895.2-201ENST00000619558 447 ntBASIC1.06□□□□□ -2.24
SSNA1O43805 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.06□□□□□ -2.24
SSNA1O43805 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.06□□□□□ -2.24
SSNA1O43805 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.06□□□□□ -2.24
SSNA1O43805 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.05□□□□□ -2.24
SSNA1O43805 ICE2P2-201ENST00000483823 2787 ntBASIC1.05□□□□□ -2.24
SSNA1O43805 Y_RNA.110-201ENST00000363220 99 ntBASIC1.05□□□□□ -2.24
SSNA1O43805 RNU6-769P-201ENST00000384407 104 ntBASIC1.05□□□□□ -2.24
SSNA1O43805 RNU6-296P-201ENST00000384608 107 ntBASIC1.05□□□□□ -2.24
SSNA1O43805 MIR10A-201ENST00000385043 110 ntBASIC1.05□□□□□ -2.24
SSNA1O43805 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
SSNA1O43805 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC1.05□□□□□ -2.24
SSNA1O43805 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.05□□□□□ -2.24
SSNA1O43805 AL022238.1-201ENST00000442557 355 ntBASIC1.05□□□□□ -2.24
SSNA1O43805 AC007327.1-201ENST00000447461 264 ntBASIC1.05□□□□□ -2.24
SSNA1O43805 AC079448.1-201ENST00000449377 373 ntBASIC1.05□□□□□ -2.24
SSNA1O43805 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.05□□□□□ -2.24
SSNA1O43805 OR2A41P-201ENST00000473586 105 ntBASIC1.05□□□□□ -2.24
SSNA1O43805 RPL30P12-201ENST00000474666 353 ntBASIC1.05□□□□□ -2.24
SSNA1O43805 AC019176.1-201ENST00000518519 225 ntBASIC1.05□□□□□ -2.24
SSNA1O43805 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.05□□□□□ -2.24
SSNA1O43805 AL512310.1-201ENST00000548639 172 ntBASIC1.05□□□□□ -2.24
SSNA1O43805 TRAV32-201ENST00000553993 340 ntBASIC1.05□□□□□ -2.24
SSNA1O43805 MIR5094-201ENST00000578766 85 ntBASIC1.05□□□□□ -2.24
SSNA1O43805 MIR544B-201ENST00000582372 78 ntBASIC1.05□□□□□ -2.24
SSNA1O43805 AL078604.3-201ENST00000615580 211 ntBASIC1.05□□□□□ -2.24
SSNA1O43805 AL159153.1-201ENST00000619688 317 ntBASIC1.05□□□□□ -2.24
SSNA1O43805 AC024940.5-201ENST00000622889 474 ntBASIC1.05□□□□□ -2.24
SSNA1O43805 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.05□□□□□ -2.24
SSNA1O43805 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.05□□□□□ -2.24
SSNA1O43805 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
SSNA1O43805 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.05□□□□□ -2.24
SSNA1O43805 AP000560.1-201ENST00000624150 1937 ntBASIC1.05□□□□□ -2.24
SSNA1O43805 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.05□□□□□ -2.24
SSNA1O43805 MIR412-201ENST00000362142 91 ntBASIC1.04□□□□□ -2.24
SSNA1O43805 Y_RNA.192-201ENST00000363977 102 ntBASIC1.04□□□□□ -2.24
SSNA1O43805 SNORD14B-201ENST00000364533 90 ntBASIC1.04□□□□□ -2.24
SSNA1O43805 RNY3P13-201ENST00000365542 102 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms