Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 AC007677.1-201ENST00000445757 515 ntBASIC2.08□□□□□ -2.08
MSH4O15457 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
MSH4O15457 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.08□□□□□ -2.08
MSH4O15457 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.08□□□□□ -2.08
MSH4O15457 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.08□□□□□ -2.08
MSH4O15457 KLF3P2-201ENST00000465138 268 ntBASIC2.08□□□□□ -2.08
MSH4O15457 AC018437.1-201ENST00000492214 406 ntBASIC2.08□□□□□ -2.08
MSH4O15457 AC108210.2-201ENST00000503681 201 ntBASIC2.08□□□□□ -2.08
MSH4O15457 AC010486.2-201ENST00000505572 483 ntBASIC2.08□□□□□ -2.08
MSH4O15457 RBBP4P6-201ENST00000508098 202 ntBASIC2.08□□□□□ -2.08
MSH4O15457 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.08□□□□□ -2.08
MSH4O15457 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.08□□□□□ -2.08
MSH4O15457 CBX3P7-201ENST00000532876 502 ntBASIC2.08□□□□□ -2.08
MSH4O15457 AC079598.5-201ENST00000547460 117 ntBASIC2.08□□□□□ -2.08
MSH4O15457 AL133241.1-201ENST00000556832 487 ntBASIC2.08□□□□□ -2.08
MSH4O15457 MIR3682-201ENST00000581338 84 ntBASIC2.08□□□□□ -2.08
MSH4O15457 AL121992.2-201ENST00000606262 256 ntBASIC2.08□□□□□ -2.08
MSH4O15457 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.08□□□□□ -2.08
MSH4O15457 U6.42-201ENST00000618440 107 ntBASIC2.08□□□□□ -2.08
MSH4O15457 AC091931.1-201ENST00000623488 728 ntBASIC2.08□□□□□ -2.08
MSH4O15457 AC092656.1-203ENST00000624134 423 ntBASIC2.08□□□□□ -2.08
MSH4O15457 AC019226.2-201ENST00000625973 424 ntBASIC2.08□□□□□ -2.08
MSH4O15457 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.08□□□□□ -2.08
MSH4O15457 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.08□□□□□ -2.08
MSH4O15457 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.08□□□□□ -2.08
MSH4O15457 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
MSH4O15457 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.07□□□□□ -2.08
MSH4O15457 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
MSH4O15457 RNU6-169P-201ENST00000365336 107 ntBASIC2.07□□□□□ -2.08
MSH4O15457 RNU6-61P-201ENST00000365528 109 ntBASIC2.07□□□□□ -2.08
MSH4O15457 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
MSH4O15457 SNORA26.8-201ENST00000391306 124 ntBASIC2.07□□□□□ -2.08
MSH4O15457 RNU6-195P-201ENST00000411352 109 ntBASIC2.07□□□□□ -2.08
MSH4O15457 RNA5SP111-201ENST00000411386 101 ntBASIC2.07□□□□□ -2.08
MSH4O15457 AL627311.1-201ENST00000431514 115 ntBASIC2.07□□□□□ -2.08
MSH4O15457 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.07□□□□□ -2.08
MSH4O15457 AL353706.1-201ENST00000436728 494 ntBASIC2.07□□□□□ -2.08
MSH4O15457 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.07□□□□□ -2.08
MSH4O15457 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.07□□□□□ -2.08
MSH4O15457 AC073614.1-201ENST00000438690 650 ntBASIC2.07□□□□□ -2.08
MSH4O15457 snoU109.2-201ENST00000459316 135 ntBASIC2.07□□□□□ -2.08
MSH4O15457 snoU109.1-201ENST00000459339 135 ntBASIC2.07□□□□□ -2.08
MSH4O15457 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.07□□□□□ -2.08
MSH4O15457 AC107393.1-201ENST00000512403 346 ntBASIC2.07□□□□□ -2.08
MSH4O15457 RNU5B-3P-201ENST00000516601 115 ntBASIC2.07□□□□□ -2.08
MSH4O15457 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.07□□□□□ -2.08
MSH4O15457 AC060788.1-201ENST00000521318 469 ntBASIC2.07□□□□□ -2.08
MSH4O15457 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.07□□□□□ -2.08
MSH4O15457 OR5AQ1P-201ENST00000527596 927 ntBASIC2.07□□□□□ -2.08
MSH4O15457 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.07□□□□□ -2.08
MSH4O15457 AC135279.1-201ENST00000543493 504 ntBASIC2.07□□□□□ -2.08
MSH4O15457 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.07□□□□□ -2.08
MSH4O15457 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.07□□□□□ -2.08
MSH4O15457 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
MSH4O15457 AC011494.1-201ENST00000596454 237 ntBASIC2.07□□□□□ -2.08
MSH4O15457 AC090578.1-201ENST00000604955 591 ntBASIC2.07□□□□□ -2.08
MSH4O15457 AL138963.2-201ENST00000605137 226 ntBASIC2.07□□□□□ -2.08
MSH4O15457 SNORD14A-201ENST00000606526 91 ntBASIC2.07□□□□□ -2.08
MSH4O15457 RNU6-91P-201ENST00000607774 107 ntBASIC2.07□□□□□ -2.08
MSH4O15457 MIR6840-201ENST00000611937 71 ntBASIC2.07□□□□□ -2.08
MSH4O15457 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.07□□□□□ -2.08
MSH4O15457 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
MSH4O15457 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
MSH4O15457 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
MSH4O15457 HSPA8P4-201ENST00000511877 1920 ntBASIC2.07□□□□□ -2.08
MSH4O15457 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
MSH4O15457 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
MSH4O15457 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.06□□□□□ -2.08
MSH4O15457 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
MSH4O15457 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
MSH4O15457 RNU6-179P-201ENST00000363350 107 ntBASIC2.06□□□□□ -2.08
MSH4O15457 RNU6-1179P-201ENST00000384667 107 ntBASIC2.06□□□□□ -2.08
MSH4O15457 MIR10A-201ENST00000385043 110 ntBASIC2.06□□□□□ -2.08
MSH4O15457 SNORA26.9-201ENST00000391322 122 ntBASIC2.06□□□□□ -2.08
MSH4O15457 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
MSH4O15457 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
MSH4O15457 AL031779.1-201ENST00000415663 330 ntBASIC2.06□□□□□ -2.08
MSH4O15457 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.06□□□□□ -2.08
MSH4O15457 ISCA1P6-201ENST00000427740 390 ntBASIC2.06□□□□□ -2.08
MSH4O15457 MTATP6P16-201ENST00000434543 526 ntBASIC2.06□□□□□ -2.08
MSH4O15457 AL136380.1-201ENST00000447970 162 ntBASIC2.06□□□□□ -2.08
MSH4O15457 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.06□□□□□ -2.08
MSH4O15457 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.06□□□□□ -2.08
MSH4O15457 AL033528.1-201ENST00000453780 140 ntBASIC2.06□□□□□ -2.08
MSH4O15457 AC090515.1-201ENST00000465295 476 ntBASIC2.06□□□□□ -2.08
MSH4O15457 RPL23AP42-201ENST00000471152 471 ntBASIC2.06□□□□□ -2.08
MSH4O15457 MED28P2-201ENST00000475771 317 ntBASIC2.06□□□□□ -2.08
MSH4O15457 AC140059.1-201ENST00000489238 361 ntBASIC2.06□□□□□ -2.08
MSH4O15457 RPL23AP63-201ENST00000498752 471 ntBASIC2.06□□□□□ -2.08
MSH4O15457 AC116562.3-201ENST00000506136 177 ntBASIC2.06□□□□□ -2.08
MSH4O15457 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.06□□□□□ -2.08
MSH4O15457 AC008526.1-201ENST00000509149 338 ntBASIC2.06□□□□□ -2.08
MSH4O15457 AC117522.2-201ENST00000510049 657 ntBASIC2.06□□□□□ -2.08
MSH4O15457 AF213884.2-201ENST00000510417 903 ntBASIC2.06□□□□□ -2.08
MSH4O15457 AC068587.5-201ENST00000528506 175 ntBASIC2.06□□□□□ -2.08
MSH4O15457 AC087883.1-201ENST00000551882 391 ntBASIC2.06□□□□□ -2.08
MSH4O15457 AC009127.3-201ENST00000570531 403 ntBASIC2.06□□□□□ -2.08
MSH4O15457 AC008521.1-201ENST00000587471 187 ntBASIC2.06□□□□□ -2.08
MSH4O15457 RPS15AP11-201ENST00000594193 385 ntBASIC2.06□□□□□ -2.08
MSH4O15457 NIFKP6-201ENST00000598115 845 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms