Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM38O00635 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.45□□□□□ -1.86
TRIM38O00635 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.45□□□□□ -1.86
TRIM38O00635 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.45□□□□□ -1.86
TRIM38O00635 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM38O00635 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.44□□□□□ -1.86
TRIM38O00635 AL513302.2-201ENST00000562313 1842 ntBASIC3.44□□□□□ -1.86
TRIM38O00635 HSPA8P4-201ENST00000511877 1920 ntBASIC3.44□□□□□ -1.86
TRIM38O00635 RNU6-884P-201ENST00000363889 107 ntBASIC3.44□□□□□ -1.86
TRIM38O00635 SNORA38.1-201ENST00000364172 131 ntBASIC3.44□□□□□ -1.86
TRIM38O00635 SET-203ENST00000372688 801 ntTSL 2 BASIC3.44□□□□□ -1.86
TRIM38O00635 Y_RNA.527-201ENST00000384573 102 ntBASIC3.44□□□□□ -1.86
TRIM38O00635 U3.39-201ENST00000408569 239 ntBASIC3.44□□□□□ -1.86
TRIM38O00635 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.44□□□□□ -1.86
TRIM38O00635 RNU6-847P-201ENST00000411115 108 ntBASIC3.44□□□□□ -1.86
TRIM38O00635 RNU4-61P-201ENST00000411243 107 ntBASIC3.44□□□□□ -1.86
TRIM38O00635 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.44□□□□□ -1.86
TRIM38O00635 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
TRIM38O00635 MCFD2P1-201ENST00000417812 300 ntBASIC3.44□□□□□ -1.86
TRIM38O00635 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.44□□□□□ -1.86
TRIM38O00635 AL669831.1-202ENST00000428504 417 ntBASIC3.44□□□□□ -1.86
TRIM38O00635 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.44□□□□□ -1.86
TRIM38O00635 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.44□□□□□ -1.86
TRIM38O00635 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.44□□□□□ -1.86
TRIM38O00635 AL035666.1-201ENST00000446195 348 ntBASIC3.44□□□□□ -1.86
TRIM38O00635 AC107399.1-201ENST00000451226 265 ntBASIC3.44□□□□□ -1.86
TRIM38O00635 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.44□□□□□ -1.86
TRIM38O00635 RPL26P9-201ENST00000457466 433 ntBASIC3.44□□□□□ -1.86
TRIM38O00635 MIR2053-201ENST00000459295 91 ntBASIC3.44□□□□□ -1.86
TRIM38O00635 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.44□□□□□ -1.86
TRIM38O00635 AC091885.1-201ENST00000506658 268 ntBASIC3.44□□□□□ -1.86
TRIM38O00635 AC107222.1-201ENST00000510899 637 ntBASIC3.44□□□□□ -1.86
TRIM38O00635 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.44□□□□□ -1.86
TRIM38O00635 AC008716.1-201ENST00000511084 513 ntBASIC3.44□□□□□ -1.86
TRIM38O00635 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.44□□□□□ -1.86
TRIM38O00635 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.44□□□□□ -1.86
TRIM38O00635 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.44□□□□□ -1.86
TRIM38O00635 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.44□□□□□ -1.86
TRIM38O00635 MIR4424-201ENST00000585257 86 ntBASIC3.44□□□□□ -1.86
TRIM38O00635 BNIP3P25-201ENST00000596023 559 ntBASIC3.44□□□□□ -1.86
TRIM38O00635 FAM157A-202ENST00000615155 405 ntBASIC3.44□□□□□ -1.86
TRIM38O00635 MIR7112-201ENST00000616126 65 ntBASIC3.44□□□□□ -1.86
TRIM38O00635 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.44□□□□□ -1.86
TRIM38O00635 SNORD39.4-201ENST00000620099 78 ntBASIC3.44□□□□□ -1.86
TRIM38O00635 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.44□□□□□ -1.86
TRIM38O00635 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
TRIM38O00635 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TRIM38O00635 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TRIM38O00635 MTND5P10-201ENST00000603719 1809 ntBASIC3.43□□□□□ -1.86
TRIM38O00635 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.43□□□□□ -1.86
TRIM38O00635 MIR412-201ENST00000362142 91 ntBASIC3.43□□□□□ -1.86
TRIM38O00635 RNU6-1115P-201ENST00000362490 106 ntBASIC3.43□□□□□ -1.86
TRIM38O00635 RNU6-379P-201ENST00000363813 104 ntBASIC3.43□□□□□ -1.86
TRIM38O00635 AC117470.1-201ENST00000381974 330 ntBASIC3.43□□□□□ -1.86
TRIM38O00635 RNU6-1032P-201ENST00000384100 107 ntBASIC3.43□□□□□ -1.86
TRIM38O00635 RNU4-70P-201ENST00000384579 139 ntBASIC3.43□□□□□ -1.86
TRIM38O00635 MIR634-201ENST00000385208 97 ntBASIC3.43□□□□□ -1.86
TRIM38O00635 SNORA40C-201ENST00000391285 128 ntBASIC3.43□□□□□ -1.86
TRIM38O00635 MRPL42P3-201ENST00000401492 326 ntBASIC3.43□□□□□ -1.86
TRIM38O00635 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.43□□□□□ -1.86
TRIM38O00635 RPL37P10-201ENST00000412884 288 ntBASIC3.43□□□□□ -1.86
TRIM38O00635 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.43□□□□□ -1.86
TRIM38O00635 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.43□□□□□ -1.86
TRIM38O00635 NDUFB1P2-201ENST00000449477 176 ntBASIC3.43□□□□□ -1.86
TRIM38O00635 RPL30P15-201ENST00000457129 321 ntBASIC3.43□□□□□ -1.86
TRIM38O00635 RNU7-180P-201ENST00000459240 63 ntBASIC3.43□□□□□ -1.86
TRIM38O00635 AC021205.2-201ENST00000480069 347 ntBASIC3.43□□□□□ -1.86
TRIM38O00635 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.43□□□□□ -1.86
TRIM38O00635 RNU6-1038P-201ENST00000516516 104 ntBASIC3.43□□□□□ -1.86
TRIM38O00635 SNORA31.21-201ENST00000517180 77 ntBASIC3.43□□□□□ -1.86
TRIM38O00635 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.43□□□□□ -1.86
TRIM38O00635 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TRIM38O00635 AC026333.2-201ENST00000542164 106 ntBASIC3.43□□□□□ -1.86
TRIM38O00635 NACAP3-201ENST00000552100 481 ntBASIC3.43□□□□□ -1.86
TRIM38O00635 H3F3AP1-201ENST00000559984 334 ntBASIC3.43□□□□□ -1.86
TRIM38O00635 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.43□□□□□ -1.86
TRIM38O00635 AC083806.3-201ENST00000614016 455 ntBASIC3.43□□□□□ -1.86
TRIM38O00635 AC007485.1-201ENST00000616755 206 ntBASIC3.43□□□□□ -1.86
TRIM38O00635 MIR8057-201ENST00000620957 69 ntBASIC3.43□□□□□ -1.86
TRIM38O00635 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
TRIM38O00635 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
TRIM38O00635 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
TRIM38O00635 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
TRIM38O00635 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
TRIM38O00635 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
TRIM38O00635 Y_RNA.111-201ENST00000363248 100 ntBASIC3.42□□□□□ -1.86
TRIM38O00635 Y_RNA.135-201ENST00000363439 95 ntBASIC3.42□□□□□ -1.86
TRIM38O00635 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.42□□□□□ -1.86
TRIM38O00635 Y_RNA.530-201ENST00000384587 101 ntBASIC3.42□□□□□ -1.86
TRIM38O00635 AL606923.1-201ENST00000406616 190 ntBASIC3.42□□□□□ -1.86
TRIM38O00635 SNORA11.2-201ENST00000408318 127 ntBASIC3.42□□□□□ -1.86
TRIM38O00635 MIR548I3-201ENST00000408378 149 ntBASIC3.42□□□□□ -1.86
TRIM38O00635 MIR548I1-201ENST00000408810 149 ntBASIC3.42□□□□□ -1.86
TRIM38O00635 AC074085.1-201ENST00000413598 418 ntBASIC3.42□□□□□ -1.86
TRIM38O00635 AC017079.2-201ENST00000416102 485 ntBASIC3.42□□□□□ -1.86
TRIM38O00635 AC018865.2-201ENST00000423631 129 ntBASIC3.42□□□□□ -1.86
TRIM38O00635 SKA2P1-201ENST00000425592 390 ntBASIC3.42□□□□□ -1.86
TRIM38O00635 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.42□□□□□ -1.86
TRIM38O00635 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.42□□□□□ -1.86
TRIM38O00635 Y_RNA.653-201ENST00000459091 95 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms