Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 AC095038.3-201ENST00000634439 195 ntBASIC0.32□□□□□ -2.36
HMGN4O00479 AC092447.10-201ENST00000620607 1652 ntBASIC0.31□□□□□ -2.36
HMGN4O00479 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
HMGN4O00479 RNA5SP493-201ENST00000364115 91 ntBASIC0.31□□□□□ -2.36
HMGN4O00479 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.31□□□□□ -2.36
HMGN4O00479 MIR499A-201ENST00000384903 122 ntBASIC0.31□□□□□ -2.36
HMGN4O00479 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC0.31□□□□□ -2.36
HMGN4O00479 UBE2V1P11-201ENST00000411559 285 ntBASIC0.31□□□□□ -2.36
HMGN4O00479 RPS26P5-201ENST00000418544 335 ntBASIC0.31□□□□□ -2.36
HMGN4O00479 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.31□□□□□ -2.36
HMGN4O00479 AC010153.1-201ENST00000432862 727 ntBASIC0.31□□□□□ -2.36
HMGN4O00479 AC234064.1-201ENST00000436312 247 ntBASIC0.31□□□□□ -2.36
HMGN4O00479 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.31□□□□□ -2.36
HMGN4O00479 BET1P1-201ENST00000482276 359 ntBASIC0.31□□□□□ -2.36
HMGN4O00479 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
HMGN4O00479 PDCD5P2-201ENST00000507570 312 ntBASIC0.31□□□□□ -2.36
HMGN4O00479 AC008628.1-201ENST00000508663 265 ntBASIC0.31□□□□□ -2.36
HMGN4O00479 AC010460.2-201ENST00000509054 677 ntBASIC0.31□□□□□ -2.36
HMGN4O00479 AC048346.1-201ENST00000510247 144 ntBASIC0.31□□□□□ -2.36
HMGN4O00479 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.31□□□□□ -2.36
HMGN4O00479 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
HMGN4O00479 RNU6-1092P-201ENST00000516955 87 ntBASIC0.31□□□□□ -2.36
HMGN4O00479 MIR3169-201ENST00000578032 83 ntBASIC0.31□□□□□ -2.36
HMGN4O00479 AC096772.1-201ENST00000609146 564 ntBASIC0.31□□□□□ -2.36
HMGN4O00479 AC096586.1-201ENST00000610267 561 ntBASIC0.31□□□□□ -2.36
HMGN4O00479 MIR6513-201ENST00000621188 64 ntBASIC0.31□□□□□ -2.36
HMGN4O00479 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.31□□□□□ -2.36
HMGN4O00479 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.3□□□□□ -2.36
HMGN4O00479 SNORD18A-201ENST00000363753 72 ntBASIC0.3□□□□□ -2.36
HMGN4O00479 SNORD114-24-201ENST00000365029 72 ntBASIC0.3□□□□□ -2.36
HMGN4O00479 RNU6-1274P-201ENST00000384557 107 ntBASIC0.3□□□□□ -2.36
HMGN4O00479 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.3□□□□□ -2.36
HMGN4O00479 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.3□□□□□ -2.36
HMGN4O00479 SNX2P2-201ENST00000424553 323 ntBASIC0.3□□□□□ -2.36
HMGN4O00479 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.3□□□□□ -2.36
HMGN4O00479 MTND4P6-201ENST00000438297 472 ntBASIC0.3□□□□□ -2.36
HMGN4O00479 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.3□□□□□ -2.36
HMGN4O00479 MTND2P4-201ENST00000445034 1004 ntBASIC0.3□□□□□ -2.36
HMGN4O00479 AL096829.2-201ENST00000446582 742 ntBASIC0.3□□□□□ -2.36
HMGN4O00479 MTND3P4-201ENST00000453537 303 ntBASIC0.3□□□□□ -2.36
HMGN4O00479 COX6CP6-201ENST00000490840 228 ntBASIC0.3□□□□□ -2.36
HMGN4O00479 AC116655.1-201ENST00000508324 901 ntBASIC0.3□□□□□ -2.36
HMGN4O00479 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC0.3□□□□□ -2.36
HMGN4O00479 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.3□□□□□ -2.36
HMGN4O00479 AC090502.2-201ENST00000549267 280 ntBASIC0.3□□□□□ -2.36
HMGN4O00479 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.3□□□□□ -2.36
HMGN4O00479 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
HMGN4O00479 AC098614.4-201ENST00000607601 462 ntBASIC0.3□□□□□ -2.36
HMGN4O00479 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.3□□□□□ -2.36
HMGN4O00479 AL596245.1-201ENST00000618994 362 ntBASIC0.3□□□□□ -2.36
HMGN4O00479 PCF11-AS1-201ENST00000602322 1516 ntBASIC0.29□□□□□ -2.36
HMGN4O00479 RNU6-582P-201ENST00000362989 107 ntBASIC0.29□□□□□ -2.36
HMGN4O00479 U3.8-201ENST00000363675 217 ntBASIC0.29□□□□□ -2.36
HMGN4O00479 RNU1-133P-201ENST00000364867 167 ntBASIC0.29□□□□□ -2.36
HMGN4O00479 SNORA50A-201ENST00000384225 134 ntBASIC0.29□□□□□ -2.36
HMGN4O00479 RPL21P1-201ENST00000399532 476 ntBASIC0.29□□□□□ -2.36
HMGN4O00479 RNA5SP247-201ENST00000411181 105 ntBASIC0.29□□□□□ -2.36
HMGN4O00479 TRIM60P5Y-201ENST00000413946 574 ntBASIC0.29□□□□□ -2.36
HMGN4O00479 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.29□□□□□ -2.36
HMGN4O00479 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.29□□□□□ -2.36
HMGN4O00479 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.29□□□□□ -2.36
HMGN4O00479 AC010099.3-201ENST00000423896 409 ntBASIC0.29□□□□□ -2.36
HMGN4O00479 AC244023.1-201ENST00000426884 112 ntBASIC0.29□□□□□ -2.36
HMGN4O00479 AL669831.1-202ENST00000428504 417 ntBASIC0.29□□□□□ -2.36
HMGN4O00479 AC092170.1-201ENST00000440211 356 ntBASIC0.29□□□□□ -2.36
HMGN4O00479 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC0.29□□□□□ -2.36
HMGN4O00479 RNU4-54P-201ENST00000516428 129 ntBASIC0.29□□□□□ -2.36
HMGN4O00479 RNA5SP121-201ENST00000516537 101 ntBASIC0.29□□□□□ -2.36
HMGN4O00479 RN7SKP49-201ENST00000516675 260 ntBASIC0.29□□□□□ -2.36
HMGN4O00479 RNU6-1223P-201ENST00000517124 104 ntBASIC0.29□□□□□ -2.36
HMGN4O00479 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC0.29□□□□□ -2.36
HMGN4O00479 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.29□□□□□ -2.36
HMGN4O00479 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.29□□□□□ -2.36
HMGN4O00479 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC0.29□□□□□ -2.36
HMGN4O00479 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.29□□□□□ -2.36
HMGN4O00479 AC136619.2-201ENST00000563361 631 ntBASIC0.29□□□□□ -2.36
HMGN4O00479 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.29□□□□□ -2.36
HMGN4O00479 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC0.29□□□□□ -2.36
HMGN4O00479 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.29□□□□□ -2.36
HMGN4O00479 AC242498.1-201ENST00000604134 111 ntBASIC0.29□□□□□ -2.36
HMGN4O00479 AC107952.2-201ENST00000606048 486 ntBASIC0.29□□□□□ -2.36
HMGN4O00479 AL133445.2-201ENST00000611191 527 ntBASIC0.29□□□□□ -2.36
HMGN4O00479 AC243994.1-201ENST00000618627 109 ntBASIC0.29□□□□□ -2.36
HMGN4O00479 AC002550.2-201ENST00000621246 394 ntBASIC0.29□□□□□ -2.36
HMGN4O00479 AC243829.3-201ENST00000622177 108 ntBASIC0.29□□□□□ -2.36
HMGN4O00479 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
HMGN4O00479 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
HMGN4O00479 RNU6-1280P-201ENST00000365211 107 ntBASIC0.28□□□□□ -2.36
HMGN4O00479 RNU6-657P-201ENST00000383904 107 ntBASIC0.28□□□□□ -2.36
HMGN4O00479 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
HMGN4O00479 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.28□□□□□ -2.36
HMGN4O00479 RAC1P8-201ENST00000427086 527 ntBASIC0.28□□□□□ -2.36
HMGN4O00479 TIMM9P1-201ENST00000436122 256 ntBASIC0.28□□□□□ -2.36
HMGN4O00479 GTF2IP13-201ENST00000438487 386 ntBASIC0.28□□□□□ -2.36
HMGN4O00479 KATNBL1P3-201ENST00000443475 909 ntBASIC0.28□□□□□ -2.36
HMGN4O00479 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.28□□□□□ -2.36
HMGN4O00479 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.28□□□□□ -2.36
HMGN4O00479 MTCYBP40-201ENST00000509390 1135 ntBASIC0.28□□□□□ -2.36
HMGN4O00479 AC093259.1-201ENST00000509755 300 ntBASIC0.28□□□□□ -2.36
HMGN4O00479 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms