Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 AC008526.1-201ENST00000509149 338 ntBASIC3.1□□□□□ -1.91
C4orf47A7E2U8 HIGD1AP13-201ENST00000509878 289 ntBASIC3.1□□□□□ -1.91
C4orf47A7E2U8 TBCAP3-201ENST00000512475 312 ntBASIC3.1□□□□□ -1.91
C4orf47A7E2U8 RNU6-840P-201ENST00000517275 65 ntBASIC3.1□□□□□ -1.91
C4orf47A7E2U8 AP006587.4-201ENST00000526053 529 ntBASIC3.1□□□□□ -1.91
C4orf47A7E2U8 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.1□□□□□ -1.91
C4orf47A7E2U8 AL117187.1-201ENST00000555482 181 ntBASIC3.1□□□□□ -1.91
C4orf47A7E2U8 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.1□□□□□ -1.91
C4orf47A7E2U8 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.1□□□□□ -1.91
C4orf47A7E2U8 RPL23AP84-201ENST00000571193 464 ntBASIC3.1□□□□□ -1.91
C4orf47A7E2U8 MIR4680-201ENST00000580906 66 ntBASIC3.1□□□□□ -1.91
C4orf47A7E2U8 AC009570.1-201ENST00000609599 745 ntBASIC3.1□□□□□ -1.91
C4orf47A7E2U8 RMST_8.1-201ENST00000610287 165 ntBASIC3.1□□□□□ -1.91
C4orf47A7E2U8 uc_338.1-201ENST00000612113 180 ntBASIC3.1□□□□□ -1.91
C4orf47A7E2U8 AL138726.1-201ENST00000614873 333 ntBASIC3.1□□□□□ -1.91
C4orf47A7E2U8 FAM157A-202ENST00000615155 405 ntBASIC3.1□□□□□ -1.91
C4orf47A7E2U8 MIR6076-201ENST00000617521 113 ntBASIC3.1□□□□□ -1.91
C4orf47A7E2U8 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
C4orf47A7E2U8 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
C4orf47A7E2U8 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.1□□□□□ -1.91
C4orf47A7E2U8 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
C4orf47A7E2U8 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
C4orf47A7E2U8 AL359693.1-201ENST00000614959 2407 ntBASIC3.1□□□□□ -1.91
C4orf47A7E2U8 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
C4orf47A7E2U8 RNU6-1115P-201ENST00000362490 106 ntBASIC3.09□□□□□ -1.91
C4orf47A7E2U8 RNU6-907P-201ENST00000390924 102 ntBASIC3.09□□□□□ -1.91
C4orf47A7E2U8 CISD1P1-201ENST00000393907 327 ntBASIC3.09□□□□□ -1.91
C4orf47A7E2U8 AL360182.1-201ENST00000397433 468 ntBASIC3.09□□□□□ -1.91
C4orf47A7E2U8 RN7SKP220-201ENST00000410611 288 ntBASIC3.09□□□□□ -1.91
C4orf47A7E2U8 RNU6-387P-201ENST00000411331 105 ntBASIC3.09□□□□□ -1.91
C4orf47A7E2U8 AC126124.2-201ENST00000413542 321 ntBASIC3.09□□□□□ -1.91
C4orf47A7E2U8 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.09□□□□□ -1.91
C4orf47A7E2U8 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.09□□□□□ -1.91
C4orf47A7E2U8 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.09□□□□□ -1.91
C4orf47A7E2U8 AL035666.1-201ENST00000446195 348 ntBASIC3.09□□□□□ -1.91
C4orf47A7E2U8 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.09□□□□□ -1.91
C4orf47A7E2U8 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.09□□□□□ -1.91
C4orf47A7E2U8 HSPE1P6-201ENST00000479457 291 ntBASIC3.09□□□□□ -1.91
C4orf47A7E2U8 AC079140.5-201ENST00000507882 310 ntBASIC3.09□□□□□ -1.91
C4orf47A7E2U8 RN7SKP272-201ENST00000516988 232 ntBASIC3.09□□□□□ -1.91
C4orf47A7E2U8 AC093331.1-201ENST00000521474 169 ntBASIC3.09□□□□□ -1.91
C4orf47A7E2U8 AP003122.3-201ENST00000526316 255 ntBASIC3.09□□□□□ -1.91
C4orf47A7E2U8 AC090115.3-201ENST00000553218 849 ntBASIC3.09□□□□□ -1.91
C4orf47A7E2U8 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.09□□□□□ -1.91
C4orf47A7E2U8 AC005951.2-201ENST00000576282 495 ntBASIC3.09□□□□□ -1.91
C4orf47A7E2U8 MIR4319-201ENST00000577285 85 ntBASIC3.09□□□□□ -1.91
C4orf47A7E2U8 MIR4425-201ENST00000580572 84 ntBASIC3.09□□□□□ -1.91
C4orf47A7E2U8 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.09□□□□□ -1.91
C4orf47A7E2U8 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.09□□□□□ -1.91
C4orf47A7E2U8 VN1R107P-201ENST00000601784 209 ntBASIC3.09□□□□□ -1.91
C4orf47A7E2U8 ATP1B3P1-201ENST00000605365 821 ntBASIC3.09□□□□□ -1.91
C4orf47A7E2U8 AC087588.2-201ENST00000617667 426 ntBASIC3.09□□□□□ -1.91
C4orf47A7E2U8 AL669831.3-213ENST00000636676 183 ntBASIC3.09□□□□□ -1.91
C4orf47A7E2U8 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.09□□□□□ -1.91
C4orf47A7E2U8 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.09□□□□□ -1.91
C4orf47A7E2U8 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.09□□□□□ -1.92
C4orf47A7E2U8 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.08□□□□□ -1.92
C4orf47A7E2U8 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.08□□□□□ -1.92
C4orf47A7E2U8 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.08□□□□□ -1.92
C4orf47A7E2U8 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.08□□□□□ -1.92
C4orf47A7E2U8 DEFB108F-201ENST00000344638 222 ntBASIC3.08□□□□□ -1.92
C4orf47A7E2U8 RNU6-1040P-201ENST00000383974 107 ntBASIC3.08□□□□□ -1.92
C4orf47A7E2U8 SNORA16.2-201ENST00000390991 127 ntBASIC3.08□□□□□ -1.92
C4orf47A7E2U8 SNORD70.1-201ENST00000391007 85 ntBASIC3.08□□□□□ -1.92
C4orf47A7E2U8 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
C4orf47A7E2U8 MIR548F4-201ENST00000408515 105 ntBASIC3.08□□□□□ -1.92
C4orf47A7E2U8 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.08□□□□□ -1.92
C4orf47A7E2U8 RNA5SP184-201ENST00000411071 108 ntBASIC3.08□□□□□ -1.92
C4orf47A7E2U8 AC018865.2-201ENST00000423631 129 ntBASIC3.08□□□□□ -1.92
C4orf47A7E2U8 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.08□□□□□ -1.92
C4orf47A7E2U8 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.08□□□□□ -1.92
C4orf47A7E2U8 AC108059.2-201ENST00000434626 151 ntBASIC3.08□□□□□ -1.92
C4orf47A7E2U8 RPS4XP2-201ENST00000458402 793 ntBASIC3.08□□□□□ -1.92
C4orf47A7E2U8 RPL23AP67-201ENST00000465341 474 ntBASIC3.08□□□□□ -1.92
C4orf47A7E2U8 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.08□□□□□ -1.92
C4orf47A7E2U8 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.08□□□□□ -1.92
C4orf47A7E2U8 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.08□□□□□ -1.92
C4orf47A7E2U8 RNU6-976P-201ENST00000516086 111 ntBASIC3.08□□□□□ -1.92
C4orf47A7E2U8 RANP3-201ENST00000530970 276 ntBASIC3.08□□□□□ -1.92
C4orf47A7E2U8 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.08□□□□□ -1.92
C4orf47A7E2U8 TGIF1P1-201ENST00000558095 802 ntBASIC3.08□□□□□ -1.92
C4orf47A7E2U8 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.08□□□□□ -1.92
C4orf47A7E2U8 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.08□□□□□ -1.92
C4orf47A7E2U8 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
C4orf47A7E2U8 AC104763.2-201ENST00000604179 382 ntBASIC3.08□□□□□ -1.92
C4orf47A7E2U8 AL670379.4-201ENST00000605279 254 ntBASIC3.08□□□□□ -1.92
C4orf47A7E2U8 AC005014.2-201ENST00000607795 599 ntBASIC3.08□□□□□ -1.92
C4orf47A7E2U8 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
C4orf47A7E2U8 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
C4orf47A7E2U8 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.08□□□□□ -1.92
C4orf47A7E2U8 KPNA2P1-201ENST00000458289 1591 ntBASIC3.08□□□□□ -1.92
C4orf47A7E2U8 MTND5P30-201ENST00000452896 1731 ntBASIC3.07□□□□□ -1.92
C4orf47A7E2U8 SDAD1P2-201ENST00000441308 2028 ntBASIC3.07□□□□□ -1.92
C4orf47A7E2U8 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
C4orf47A7E2U8 Y_RNA.158-201ENST00000363651 101 ntBASIC3.07□□□□□ -1.92
C4orf47A7E2U8 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
C4orf47A7E2U8 RNU6-1032P-201ENST00000384100 107 ntBASIC3.07□□□□□ -1.92
C4orf47A7E2U8 SNORA1.3-201ENST00000384676 136 ntBASIC3.07□□□□□ -1.92
C4orf47A7E2U8 SNORD15B-201ENST00000384714 146 ntBASIC3.07□□□□□ -1.92
C4orf47A7E2U8 RPS4XP3-201ENST00000398541 413 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms