Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 Y_RNA.255-201ENST00000364581 97 ntBASIC0.63□□□□□ -2.31
TRBV27A0A0K0K1C4 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC0.63□□□□□ -2.31
TRBV27A0A0K0K1C4 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.63□□□□□ -2.31
TRBV27A0A0K0K1C4 RNU6-360P-201ENST00000390944 104 ntBASIC0.63□□□□□ -2.31
TRBV27A0A0K0K1C4 SNORA17.3-201ENST00000391159 129 ntBASIC0.63□□□□□ -2.31
TRBV27A0A0K0K1C4 SNORA11.2-201ENST00000408318 127 ntBASIC0.63□□□□□ -2.31
TRBV27A0A0K0K1C4 UBE2V1P10-201ENST00000414685 269 ntBASIC0.63□□□□□ -2.31
TRBV27A0A0K0K1C4 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.63□□□□□ -2.31
TRBV27A0A0K0K1C4 POLR2J4-204ENST00000418424 324 ntBASIC0.63□□□□□ -2.31
TRBV27A0A0K0K1C4 AC013410.2-201ENST00000422627 201 ntBASIC0.63□□□□□ -2.31
TRBV27A0A0K0K1C4 RAC1P6-201ENST00000423911 575 ntBASIC0.63□□□□□ -2.31
TRBV27A0A0K0K1C4 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.63□□□□□ -2.31
TRBV27A0A0K0K1C4 MTCO1P3-201ENST00000429327 192 ntBASIC0.63□□□□□ -2.31
TRBV27A0A0K0K1C4 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC0.63□□□□□ -2.31
TRBV27A0A0K0K1C4 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC0.63□□□□□ -2.31
TRBV27A0A0K0K1C4 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.63□□□□□ -2.31
TRBV27A0A0K0K1C4 AC132479.1-201ENST00000449160 144 ntBASIC0.63□□□□□ -2.31
TRBV27A0A0K0K1C4 MTND1P31-201ENST00000449206 961 ntBASIC0.63□□□□□ -2.31
TRBV27A0A0K0K1C4 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.63□□□□□ -2.31
TRBV27A0A0K0K1C4 AL163195.1-201ENST00000496941 348 ntBASIC0.63□□□□□ -2.31
TRBV27A0A0K0K1C4 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.63□□□□□ -2.31
TRBV27A0A0K0K1C4 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC0.63□□□□□ -2.31
TRBV27A0A0K0K1C4 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
TRBV27A0A0K0K1C4 MIR5094-201ENST00000578766 85 ntBASIC0.63□□□□□ -2.31
TRBV27A0A0K0K1C4 MIR3945-201ENST00000581853 98 ntBASIC0.63□□□□□ -2.31
TRBV27A0A0K0K1C4 MIR4661-201ENST00000582720 75 ntBASIC0.63□□□□□ -2.31
TRBV27A0A0K0K1C4 AC013244.2-201ENST00000603396 103 ntBASIC0.63□□□□□ -2.31
TRBV27A0A0K0K1C4 AL391646.1-201ENST00000603860 190 ntBASIC0.63□□□□□ -2.31
TRBV27A0A0K0K1C4 BX284668.6-201ENST00000606899 438 ntBASIC0.63□□□□□ -2.31
TRBV27A0A0K0K1C4 AL021879.1-201ENST00000611756 288 ntBASIC0.63□□□□□ -2.31
TRBV27A0A0K0K1C4 AC027335.2-201ENST00000624030 375 ntBASIC0.63□□□□□ -2.31
TRBV27A0A0K0K1C4 AC009033.1-201ENST00000624279 431 ntBASIC0.63□□□□□ -2.31
TRBV27A0A0K0K1C4 AC022513.1-201ENST00000624512 117 ntBASIC0.63□□□□□ -2.31
TRBV27A0A0K0K1C4 MIR1248-201ENST00000629190 106 ntBASIC0.63□□□□□ -2.31
TRBV27A0A0K0K1C4 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
TRBV27A0A0K0K1C4 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
TRBV27A0A0K0K1C4 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
TRBV27A0A0K0K1C4 SNORD114-2-201ENST00000363953 78 ntBASIC0.62□□□□□ -2.31
TRBV27A0A0K0K1C4 SNORA25-201ENST00000384384 134 ntBASIC0.62□□□□□ -2.31
TRBV27A0A0K0K1C4 RNU6-843P-201ENST00000384454 104 ntBASIC0.62□□□□□ -2.31
TRBV27A0A0K0K1C4 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
TRBV27A0A0K0K1C4 RN7SKP61-201ENST00000410642 295 ntBASIC0.62□□□□□ -2.31
TRBV27A0A0K0K1C4 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.62□□□□□ -2.31
TRBV27A0A0K0K1C4 AL161935.2-201ENST00000414627 60 ntBASIC0.62□□□□□ -2.31
TRBV27A0A0K0K1C4 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.62□□□□□ -2.31
TRBV27A0A0K0K1C4 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.62□□□□□ -2.31
TRBV27A0A0K0K1C4 ZFAND6P1-201ENST00000434138 605 ntBASIC0.62□□□□□ -2.31
TRBV27A0A0K0K1C4 HSPE1P9-201ENST00000440046 311 ntBASIC0.62□□□□□ -2.31
TRBV27A0A0K0K1C4 MTND5P14-201ENST00000441481 1267 ntBASIC0.62□□□□□ -2.31
TRBV27A0A0K0K1C4 KATNBL1P3-201ENST00000443475 909 ntBASIC0.62□□□□□ -2.31
TRBV27A0A0K0K1C4 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.62□□□□□ -2.31
TRBV27A0A0K0K1C4 RPS27P1-201ENST00000450552 247 ntBASIC0.62□□□□□ -2.31
TRBV27A0A0K0K1C4 HSPE1P13-201ENST00000451143 297 ntBASIC0.62□□□□□ -2.31
TRBV27A0A0K0K1C4 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.62□□□□□ -2.31
TRBV27A0A0K0K1C4 RNU6-351P-201ENST00000516097 100 ntBASIC0.62□□□□□ -2.31
TRBV27A0A0K0K1C4 SCARNA16.2-201ENST00000516520 172 ntBASIC0.62□□□□□ -2.31
TRBV27A0A0K0K1C4 AC087441.2-201ENST00000529141 262 ntBASIC0.62□□□□□ -2.31
TRBV27A0A0K0K1C4 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC0.62□□□□□ -2.31
TRBV27A0A0K0K1C4 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.62□□□□□ -2.31
TRBV27A0A0K0K1C4 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.62□□□□□ -2.31
TRBV27A0A0K0K1C4 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC0.62□□□□□ -2.31
TRBV27A0A0K0K1C4 AC015688.6-201ENST00000577737 104 ntBASIC0.62□□□□□ -2.31
TRBV27A0A0K0K1C4 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.62□□□□□ -2.31
TRBV27A0A0K0K1C4 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.62□□□□□ -2.31
TRBV27A0A0K0K1C4 AC092656.1-203ENST00000624134 423 ntBASIC0.62□□□□□ -2.31
TRBV27A0A0K0K1C4 AC120349.3-201ENST00000624377 529 ntBASIC0.62□□□□□ -2.31
TRBV27A0A0K0K1C4 AC095038.3-201ENST00000634439 195 ntBASIC0.62□□□□□ -2.31
TRBV27A0A0K0K1C4 MTND5P35-201ENST00000557537 1720 ntBASIC0.61□□□□□ -2.31
TRBV27A0A0K0K1C4 AL079343.1-201ENST00000572358 1771 ntBASIC0.61□□□□□ -2.31
TRBV27A0A0K0K1C4 RNU4-51P-201ENST00000364206 140 ntBASIC0.61□□□□□ -2.31
TRBV27A0A0K0K1C4 SNORD114-6-201ENST00000364393 72 ntBASIC0.61□□□□□ -2.31
TRBV27A0A0K0K1C4 RNU1-36P-201ENST00000365130 165 ntBASIC0.61□□□□□ -2.31
TRBV27A0A0K0K1C4 RNU6-487P-201ENST00000365430 104 ntBASIC0.61□□□□□ -2.31
TRBV27A0A0K0K1C4 MIR532-201ENST00000385025 91 ntBASIC0.61□□□□□ -2.31
TRBV27A0A0K0K1C4 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
TRBV27A0A0K0K1C4 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
TRBV27A0A0K0K1C4 USP9YP33-201ENST00000412220 421 ntBASIC0.61□□□□□ -2.31
TRBV27A0A0K0K1C4 C8orf59P1-201ENST00000429930 303 ntBASIC0.61□□□□□ -2.31
TRBV27A0A0K0K1C4 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC0.61□□□□□ -2.31
TRBV27A0A0K0K1C4 AC245047.4-201ENST00000433189 144 ntBASIC0.61□□□□□ -2.31
TRBV27A0A0K0K1C4 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC0.61□□□□□ -2.31
TRBV27A0A0K0K1C4 RNA5SP269-201ENST00000459032 137 ntBASIC0.61□□□□□ -2.31
TRBV27A0A0K0K1C4 RPF2P2-201ENST00000504693 896 ntBASIC0.61□□□□□ -2.31
TRBV27A0A0K0K1C4 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.61□□□□□ -2.31
TRBV27A0A0K0K1C4 ACA64.5-201ENST00000516207 127 ntBASIC0.61□□□□□ -2.31
TRBV27A0A0K0K1C4 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.61□□□□□ -2.31
TRBV27A0A0K0K1C4 AL512310.8-201ENST00000550183 120 ntBASIC0.61□□□□□ -2.31
TRBV27A0A0K0K1C4 AC137800.2-201ENST00000574375 120 ntBASIC0.61□□□□□ -2.31
TRBV27A0A0K0K1C4 AP003465.2-201ENST00000602571 373 ntBASIC0.61□□□□□ -2.31
TRBV27A0A0K0K1C4 BNIP3P9-201ENST00000603714 553 ntBASIC0.61□□□□□ -2.31
TRBV27A0A0K0K1C4 MZT1P2-201ENST00000604387 248 ntBASIC0.61□□□□□ -2.31
TRBV27A0A0K0K1C4 AC211469.2-201ENST00000605461 205 ntBASIC0.61□□□□□ -2.31
TRBV27A0A0K0K1C4 AL022345.2-201ENST00000606307 135 ntBASIC0.61□□□□□ -2.31
TRBV27A0A0K0K1C4 AL391813.2-201ENST00000609113 322 ntBASIC0.61□□□□□ -2.31
TRBV27A0A0K0K1C4 AC123767.1-202ENST00000620407 817 ntBASIC0.61□□□□□ -2.31
TRBV27A0A0K0K1C4 AL356094.1-201ENST00000624663 1212 ntBASIC0.61□□□□□ -2.31
TRBV27A0A0K0K1C4 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC0.61□□□□□ -2.31
TRBV27A0A0K0K1C4 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
TRBV27A0A0K0K1C4 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.61□□□□□ -2.31
TRBV27A0A0K0K1C4 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms