Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 snoU13.31-201ENST00000607291 104 ntBASIC0.91□□□□□ -2.26
TRAV1-1A0A0B4J248 AL022345.1-201ENST00000607292 135 ntBASIC0.91□□□□□ -2.26
TRAV1-1A0A0B4J248 AC012360.2-201ENST00000609349 391 ntBASIC0.91□□□□□ -2.26
TRAV1-1A0A0B4J248 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC0.91□□□□□ -2.26
TRAV1-1A0A0B4J248 HAUS6P2-201ENST00000433254 2404 ntBASIC0.91□□□□□ -2.26
TRAV1-1A0A0B4J248 RBBP8P1-201ENST00000449447 1844 ntBASIC0.91□□□□□ -2.26
TRAV1-1A0A0B4J248 RNU6-942P-201ENST00000363002 107 ntBASIC0.9□□□□□ -2.27
TRAV1-1A0A0B4J248 RNU6-288P-201ENST00000363690 104 ntBASIC0.9□□□□□ -2.27
TRAV1-1A0A0B4J248 RNU6-457P-201ENST00000363999 107 ntBASIC0.9□□□□□ -2.27
TRAV1-1A0A0B4J248 RNU6-560P-201ENST00000364007 108 ntBASIC0.9□□□□□ -2.27
TRAV1-1A0A0B4J248 RNU6-224P-201ENST00000384055 107 ntBASIC0.9□□□□□ -2.27
TRAV1-1A0A0B4J248 RNU6-701P-201ENST00000384059 107 ntBASIC0.9□□□□□ -2.27
TRAV1-1A0A0B4J248 U8.10-201ENST00000384260 133 ntBASIC0.9□□□□□ -2.27
TRAV1-1A0A0B4J248 MIR301A-201ENST00000385261 86 ntBASIC0.9□□□□□ -2.27
TRAV1-1A0A0B4J248 RN7SKP266-201ENST00000410232 287 ntBASIC0.9□□□□□ -2.27
TRAV1-1A0A0B4J248 Y_RNA.595-201ENST00000410403 105 ntBASIC0.9□□□□□ -2.27
TRAV1-1A0A0B4J248 RNU6-174P-201ENST00000410406 106 ntBASIC0.9□□□□□ -2.27
TRAV1-1A0A0B4J248 AC083875.1-201ENST00000419509 405 ntBASIC0.9□□□□□ -2.27
TRAV1-1A0A0B4J248 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.9□□□□□ -2.27
TRAV1-1A0A0B4J248 AC092648.1-201ENST00000425870 423 ntBASIC0.9□□□□□ -2.27
TRAV1-1A0A0B4J248 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.9□□□□□ -2.27
TRAV1-1A0A0B4J248 MTCO1P44-201ENST00000441935 243 ntBASIC0.9□□□□□ -2.27
TRAV1-1A0A0B4J248 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.9□□□□□ -2.27
TRAV1-1A0A0B4J248 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.9□□□□□ -2.27
TRAV1-1A0A0B4J248 SNRPFP4-201ENST00000456366 242 ntBASIC0.9□□□□□ -2.27
TRAV1-1A0A0B4J248 AC005908.1-201ENST00000468701 347 ntBASIC0.9□□□□□ -2.27
TRAV1-1A0A0B4J248 MED28P2-201ENST00000475771 317 ntBASIC0.9□□□□□ -2.27
TRAV1-1A0A0B4J248 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.9□□□□□ -2.27
TRAV1-1A0A0B4J248 RNVU1-2-201ENST00000516326 135 ntBASIC0.9□□□□□ -2.27
TRAV1-1A0A0B4J248 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.9□□□□□ -2.27
TRAV1-1A0A0B4J248 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.9□□□□□ -2.27
TRAV1-1A0A0B4J248 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.9□□□□□ -2.27
TRAV1-1A0A0B4J248 CR383656.8-201ENST00000549046 145 ntBASIC0.9□□□□□ -2.27
TRAV1-1A0A0B4J248 AL161670.1-201ENST00000554348 137 ntBASIC0.9□□□□□ -2.27
TRAV1-1A0A0B4J248 DNAJC19P9-201ENST00000555084 351 ntBASIC0.9□□□□□ -2.27
TRAV1-1A0A0B4J248 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.9□□□□□ -2.27
TRAV1-1A0A0B4J248 MIR4422-201ENST00000581938 83 ntBASIC0.9□□□□□ -2.27
TRAV1-1A0A0B4J248 AC006270.3-201ENST00000605967 1036 ntBASIC0.9□□□□□ -2.27
TRAV1-1A0A0B4J248 AC093788.1-201ENST00000609356 927 ntBASIC0.9□□□□□ -2.27
TRAV1-1A0A0B4J248 Z82243.1-201ENST00000609432 473 ntBASIC0.9□□□□□ -2.27
TRAV1-1A0A0B4J248 AC124016.2-201ENST00000610058 665 ntBASIC0.9□□□□□ -2.27
TRAV1-1A0A0B4J248 MIR8074-201ENST00000615081 81 ntBASIC0.9□□□□□ -2.27
TRAV1-1A0A0B4J248 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.9□□□□□ -2.27
TRAV1-1A0A0B4J248 AC093648.1-201ENST00000623546 606 ntBASIC0.9□□□□□ -2.27
TRAV1-1A0A0B4J248 MIR26B-201ENST00000362251 77 ntBASIC0.89□□□□□ -2.27
TRAV1-1A0A0B4J248 SNORA62.1-201ENST00000364287 154 ntBASIC0.89□□□□□ -2.27
TRAV1-1A0A0B4J248 RNU6-622P-201ENST00000384272 103 ntBASIC0.89□□□□□ -2.27
TRAV1-1A0A0B4J248 MIR513A1-201ENST00000385138 129 ntBASIC0.89□□□□□ -2.27
TRAV1-1A0A0B4J248 Y_RNA.578-201ENST00000390903 88 ntBASIC0.89□□□□□ -2.27
TRAV1-1A0A0B4J248 CBX3P9-201ENST00000402326 552 ntBASIC0.89□□□□□ -2.27
TRAV1-1A0A0B4J248 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.89□□□□□ -2.27
TRAV1-1A0A0B4J248 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.89□□□□□ -2.27
TRAV1-1A0A0B4J248 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.89□□□□□ -2.27
TRAV1-1A0A0B4J248 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.89□□□□□ -2.27
TRAV1-1A0A0B4J248 NEFMP1-201ENST00000443423 1006 ntBASIC0.89□□□□□ -2.27
TRAV1-1A0A0B4J248 AC245517.4-201ENST00000448601 281 ntBASIC0.89□□□□□ -2.27
TRAV1-1A0A0B4J248 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.89□□□□□ -2.27
TRAV1-1A0A0B4J248 snoU13.14-201ENST00000459372 104 ntBASIC0.89□□□□□ -2.27
TRAV1-1A0A0B4J248 AL121594.1-201ENST00000475906 575 ntBASIC0.89□□□□□ -2.27
TRAV1-1A0A0B4J248 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.89□□□□□ -2.27
TRAV1-1A0A0B4J248 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.89□□□□□ -2.27
TRAV1-1A0A0B4J248 MTND1P36-201ENST00000522384 936 ntBASIC0.89□□□□□ -2.27
TRAV1-1A0A0B4J248 DEFB108A-201ENST00000530110 222 ntBASIC0.89□□□□□ -2.27
TRAV1-1A0A0B4J248 AP003034.1-201ENST00000534621 422 ntBASIC0.89□□□□□ -2.27
TRAV1-1A0A0B4J248 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.89□□□□□ -2.27
TRAV1-1A0A0B4J248 SUB1P4-201ENST00000566062 339 ntBASIC0.89□□□□□ -2.27
TRAV1-1A0A0B4J248 AP001004.1-201ENST00000582468 324 ntBASIC0.89□□□□□ -2.27
TRAV1-1A0A0B4J248 MIR4295-201ENST00000585286 85 ntBASIC0.89□□□□□ -2.27
TRAV1-1A0A0B4J248 VN1R83P-201ENST00000595685 445 ntBASIC0.89□□□□□ -2.27
TRAV1-1A0A0B4J248 VN1R80P-201ENST00000597126 338 ntBASIC0.89□□□□□ -2.27
TRAV1-1A0A0B4J248 AL157834.3-201ENST00000615543 103 ntBASIC0.89□□□□□ -2.27
TRAV1-1A0A0B4J248 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.89□□□□□ -2.27
TRAV1-1A0A0B4J248 AC009269.6-201ENST00000621778 588 ntBASIC0.89□□□□□ -2.27
TRAV1-1A0A0B4J248 AC092656.1-203ENST00000624134 423 ntBASIC0.89□□□□□ -2.27
TRAV1-1A0A0B4J248 MIR3529-201ENST00000637713 78 ntBASIC0.89□□□□□ -2.27
TRAV1-1A0A0B4J248 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.88□□□□□ -2.27
TRAV1-1A0A0B4J248 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.88□□□□□ -2.27
TRAV1-1A0A0B4J248 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
TRAV1-1A0A0B4J248 AL391987.6-201ENST00000305671 199 ntBASIC0.88□□□□□ -2.27
TRAV1-1A0A0B4J248 Y_RNA.99-201ENST00000363138 105 ntBASIC0.88□□□□□ -2.27
TRAV1-1A0A0B4J248 RNY1P10-201ENST00000363268 113 ntBASIC0.88□□□□□ -2.27
TRAV1-1A0A0B4J248 RNU6-944P-201ENST00000364023 107 ntBASIC0.88□□□□□ -2.27
TRAV1-1A0A0B4J248 Y_RNA.311-201ENST00000365068 96 ntBASIC0.88□□□□□ -2.27
TRAV1-1A0A0B4J248 SNORA4.3-201ENST00000365564 137 ntBASIC0.88□□□□□ -2.27
TRAV1-1A0A0B4J248 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
TRAV1-1A0A0B4J248 OR6C66P-201ENST00000414917 930 ntBASIC0.88□□□□□ -2.27
TRAV1-1A0A0B4J248 BTF3P4-201ENST00000418852 495 ntBASIC0.88□□□□□ -2.27
TRAV1-1A0A0B4J248 RAC1P6-201ENST00000423911 575 ntBASIC0.88□□□□□ -2.27
TRAV1-1A0A0B4J248 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.88□□□□□ -2.27
TRAV1-1A0A0B4J248 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.88□□□□□ -2.27
TRAV1-1A0A0B4J248 AL035666.1-201ENST00000446195 348 ntBASIC0.88□□□□□ -2.27
TRAV1-1A0A0B4J248 AP001025.1-201ENST00000486139 332 ntBASIC0.88□□□□□ -2.27
TRAV1-1A0A0B4J248 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC0.88□□□□□ -2.27
TRAV1-1A0A0B4J248 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.88□□□□□ -2.27
TRAV1-1A0A0B4J248 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC0.88□□□□□ -2.27
TRAV1-1A0A0B4J248 RNA5SP445-201ENST00000515889 115 ntBASIC0.88□□□□□ -2.27
TRAV1-1A0A0B4J248 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.88□□□□□ -2.27
TRAV1-1A0A0B4J248 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
TRAV1-1A0A0B4J248 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC0.88□□□□□ -2.27
TRAV1-1A0A0B4J248 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms