| BACE2 | Q9Y5Z0 | AC092047.1-201 | ENST00000424997 | 240 nt | BASIC | 4 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | AL160411.1-201 | ENST00000429853 | 400 nt | TSL 2 BASIC | 4 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | AL512844.2-201 | ENST00000433990 | 593 nt | BASIC | 4 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | NDUFB4P6-201 | ENST00000436819 | 366 nt | BASIC | 4 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | AL136369.1-201 | ENST00000437825 | 244 nt | TSL 5 BASIC | 4 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | FCF1P4-201 | ENST00000448326 | 183 nt | BASIC | 4 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | Z68323.1-201 | ENST00000450365 | 519 nt | TSL 3 BASIC | 4 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | AL138787.2-202 | ENST00000479395 | 385 nt | TSL 2 BASIC | 4 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | RPL30P5-201 | ENST00000494923 | 336 nt | BASIC | 4 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | ENSA-210 | ENST00000503241 | 574 nt | TSL 3 BASIC | 4 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | HSPE1P20-201 | ENST00000538133 | 289 nt | BASIC | 4 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | AC023157.2-201 | ENST00000540596 | 141 nt | BASIC | 4 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | AC005357.1-201 | ENST00000588399 | 301 nt | BASIC | 4 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | AC008962.1-201 | ENST00000605729 | 304 nt | BASIC | 4 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | AC103858.2-201 | ENST00000621471 | 543 nt | BASIC | 4 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | MIR4727-201 | ENST00000622232 | 55 nt | BASIC | 4 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | AC118273.1-201 | ENST00000525324 | 3006 nt | BASIC | 4 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | FNDC3A-202 | ENST00000398316 | 5714 nt | TSL 1 (best) BASIC | 4 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | ECT2-211 | ENST00000441497 | 2825 nt | APPRIS P2 TSL 1 (best) BASIC | 4 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | C12orf4-201 | ENST00000261250 | 3826 nt | APPRIS P1 TSL 1 (best) BASIC | 4 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | DOCK7-202 | ENST00000340370 | 6731 nt | APPRIS P3 TSL 2 BASIC | 4 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | DDX60L-201 | ENST00000260184 | 6754 nt | APPRIS P1 TSL 5 BASIC | 4 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | ZBED5-201 | ENST00000413761 | 2512 nt | APPRIS P1 TSL 1 (best) BASIC | 3.99 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | HSP90AA4P-202 | ENST00000506915 | 2228 nt | BASIC | 3.99 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | FAM214A-216 | ENST00000619572 | 3548 nt | APPRIS P1 TSL 1 (best) BASIC | 3.99 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | TRIM36-201 | ENST00000282369 | 4050 nt | APPRIS P1 TSL 1 (best) BASIC | 3.99 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | DENND2C-203 | ENST00000393277 | 4730 nt | TSL 5 BASIC | 3.99 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | FTLP6-201 | ENST00000355274 | 422 nt | BASIC | 3.99 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | Y_RNA.123-201 | ENST00000363338 | 102 nt | BASIC | 3.99 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | RNU6-806P-201 | ENST00000365147 | 105 nt | BASIC | 3.99 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | Y_RNA.447-201 | ENST00000384184 | 113 nt | BASIC | 3.99 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | Y_RNA.471-201 | ENST00000384312 | 102 nt | BASIC | 3.99 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | MS4A4E-201 | ENST00000398984 | 479 nt | TSL 5 BASIC | 3.99 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | MIR1302-6-201 | ENST00000408466 | 90 nt | BASIC | 3.99 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | ATP5A1P2-201 | ENST00000412323 | 255 nt | BASIC | 3.99 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | SNRPG-202 | ENST00000413456 | 398 nt | TSL 3 BASIC | 3.99 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | LINC00428-201 | ENST00000415620 | 227 nt | TSL 5 BASIC | 3.99 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | MS4A4E-203 | ENST00000425663 | 350 nt | TSL 1 (best) BASIC | 3.99 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | MTCO3P29-201 | ENST00000432119 | 779 nt | BASIC | 3.99 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | HMGN2P31-201 | ENST00000432430 | 273 nt | BASIC | 3.99 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | SNORA71B-202 | ENST00000439232 | 272 nt | BASIC | 3.99 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | Z98949.2-201 | ENST00000440996 | 144 nt | BASIC | 3.99 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | SNRPG-205 | ENST00000449935 | 428 nt | TSL 1 (best) BASIC | 3.99 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | AC092919.1-201 | ENST00000467896 | 229 nt | TSL 2 BASIC | 3.99 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | AC004052.1-202 | ENST00000505680 | 516 nt | TSL 3 BASIC | 3.99 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | AC104619.4-201 | ENST00000510773 | 249 nt | BASIC | 3.99 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | RAC1P2-201 | ENST00000511164 | 579 nt | BASIC | 3.99 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | AC109329.1-201 | ENST00000518744 | 317 nt | BASIC | 3.99 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | AC084816.1-207 | ENST00000538317 | 584 nt | TSL 4 BASIC | 3.99 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | LINC00508-201 | ENST00000538901 | 194 nt | TSL 5 BASIC | 3.99 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | AC099793.1-201 | ENST00000567538 | 285 nt | TSL 3 BASIC | 3.99 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | AL122017.1-202 | ENST00000570612 | 319 nt | TSL 5 BASIC | 3.99 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | AC022601.1-201 | ENST00000596954 | 577 nt | TSL 4 BASIC | 3.99 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | AC244505.7-201 | ENST00000599675 | 272 nt | BASIC | 3.99 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | AC006557.5-201 | ENST00000603126 | 811 nt | BASIC | 3.99 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | MSANTD4-206 | ENST00000617528 | 508 nt | TSL 5 BASIC | 3.99 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | RPAP2-203 | ENST00000610020 | 16993 nt | APPRIS P1 TSL 1 (best) BASIC | 3.99 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | PTPN22-202 | ENST00000420377 | 2726 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.99 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | TAX1BP1-213 | ENST00000543117 | 3365 nt | APPRIS ALT2 TSL 2 BASIC | 3.99 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | TUSC7-203 | ENST00000477539 | 2415 nt | TSL 1 (best) BASIC | 3.99 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | ECT2-204 | ENST00000392692 | 4158 nt | TSL 1 (best) BASIC | 3.99 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | SLC2A2-201 | ENST00000314251 | 3210 nt | APPRIS P1 TSL 1 (best) BASIC | 3.99 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | UBE3AP2-201 | ENST00000429033 | 2259 nt | BASIC | 3.98 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | C2orf16-202 | ENST00000447166 | 16401 nt | APPRIS ALT2 TSL 3 BASIC | 3.98 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | MYCBP2-211 | ENST00000544440 | 14664 nt | APPRIS P1 TSL 1 (best) BASIC | 3.98 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | IPO8P1-201 | ENST00000455509 | 3109 nt | BASIC | 3.98 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | MBD5-202 | ENST00000407073 | 9512 nt | TSL 1 (best) BASIC | 3.98 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | RNU6-50P-201 | ENST00000362356 | 103 nt | BASIC | 3.98 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | Y_RNA.64-201 | ENST00000362845 | 102 nt | BASIC | 3.98 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | SNORD74.4-201 | ENST00000364129 | 80 nt | BASIC | 3.98 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | MIR3074-201 | ENST00000384885 | 81 nt | BASIC | 3.98 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | MIR513A2-201 | ENST00000385249 | 127 nt | BASIC | 3.98 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | MT-TW-201 | ENST00000387382 | 68 nt | BASIC | 3.98 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | AL357500.1-201 | ENST00000413004 | 279 nt | TSL 3 BASIC | 3.98 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | RPS29P4-201 | ENST00000414733 | 161 nt | BASIC | 3.98 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | AL356535.1-201 | ENST00000440335 | 398 nt | BASIC | 3.98 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | SNORD105B-201 | ENST00000458770 | 79 nt | BASIC | 3.98 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | RN7SKP210-201 | ENST00000459176 | 261 nt | BASIC | 3.98 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | AC110768.1-201 | ENST00000509222 | 400 nt | BASIC | 3.98 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | AC010265.1-201 | ENST00000513509 | 211 nt | BASIC | 3.98 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | RNU6-1143P-201 | ENST00000516125 | 104 nt | BASIC | 3.98 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | RNU6-703P-201 | ENST00000516946 | 107 nt | BASIC | 3.98 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | SNORA31.18-201 | ENST00000517043 | 134 nt | BASIC | 3.98 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | RNU6-897P-201 | ENST00000517135 | 105 nt | BASIC | 3.98 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | AC010186.2-204 | ENST00000537668 | 439 nt | BASIC | 3.98 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | AC092747.1-201 | ENST00000538920 | 351 nt | TSL 5 BASIC | 3.98 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | AC092747.1-202 | ENST00000540595 | 380 nt | TSL 5 BASIC | 3.98 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | H3F3AP1-201 | ENST00000559984 | 334 nt | BASIC | 3.98 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | AC090877.1-201 | ENST00000561418 | 344 nt | BASIC | 3.98 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | CYCSP39-201 | ENST00000565821 | 309 nt | BASIC | 3.98 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | DLEU2_2.2-201 | ENST00000615474 | 90 nt | BASIC | 3.98 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | AC084757.4-201 | ENST00000616350 | 526 nt | BASIC | 3.98 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | AC130454.1-201 | ENST00000622948 | 401 nt | BASIC | 3.98 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | THEMIS-205 | ENST00000626040 | 3179 nt | APPRIS ALT2 TSL 2 BASIC | 3.98 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | RNF111-206 | ENST00000559209 | 5278 nt | TSL 1 (best) BASIC | 3.98 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | SCN3A-201 | ENST00000283254 | 9091 nt | APPRIS P3 TSL 1 (best) BASIC | 3.98 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | SEC23A-202 | ENST00000537403 | 4215 nt | TSL 2 BASIC | 3.98 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | MMS22L-202 | ENST00000369251 | 3949 nt | TSL 2 BASIC | 3.98 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | CLIC2-202 | ENST00000369449 | 2655 nt | APPRIS P1 TSL 1 (best) BASIC | 3.98 | □□□□□ -1.77 | | |
| BACE2 | Q9Y5Z0 | PP2D1-202 | ENST00000389050 | 2151 nt | APPRIS P1 TSL 5 BASIC | 3.97 | □□□□□ -1.77 | | |