Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 MTATP6P21-201ENST00000440681 189 ntBASIC5.18□□□□□ -1.58
VPS9D1Q9Y2B5 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.18□□□□□ -1.58
VPS9D1Q9Y2B5 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.18□□□□□ -1.58
VPS9D1Q9Y2B5 RPS29P2-201ENST00000479278 136 ntBASIC5.18□□□□□ -1.58
VPS9D1Q9Y2B5 RNA5SP373-201ENST00000517271 95 ntBASIC5.18□□□□□ -1.58
VPS9D1Q9Y2B5 AC026421.1-201ENST00000519101 163 ntBASIC5.18□□□□□ -1.58
VPS9D1Q9Y2B5 AC051619.2-201ENST00000559063 397 ntBASIC5.18□□□□□ -1.58
VPS9D1Q9Y2B5 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.18□□□□□ -1.58
VPS9D1Q9Y2B5 SNORD11B-201ENST00000607707 90 ntBASIC5.18□□□□□ -1.58
VPS9D1Q9Y2B5 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VPS9D1Q9Y2B5 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.18□□□□□ -1.58
VPS9D1Q9Y2B5 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
VPS9D1Q9Y2B5 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VPS9D1Q9Y2B5 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VPS9D1Q9Y2B5 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.18□□□□□ -1.58
VPS9D1Q9Y2B5 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
VPS9D1Q9Y2B5 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VPS9D1Q9Y2B5 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS9D1Q9Y2B5 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
VPS9D1Q9Y2B5 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
VPS9D1Q9Y2B5 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS9D1Q9Y2B5 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
VPS9D1Q9Y2B5 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
VPS9D1Q9Y2B5 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VPS9D1Q9Y2B5 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS9D1Q9Y2B5 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS9D1Q9Y2B5 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.17□□□□□ -1.58
VPS9D1Q9Y2B5 AL589743.1-201ENST00000551932 2712 ntBASIC5.17□□□□□ -1.58
VPS9D1Q9Y2B5 MIR590-201ENST00000385008 97 ntBASIC5.17□□□□□ -1.58
VPS9D1Q9Y2B5 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.17□□□□□ -1.58
VPS9D1Q9Y2B5 RNA5SP136-201ENST00000410906 107 ntBASIC5.17□□□□□ -1.58
VPS9D1Q9Y2B5 AC125238.1-201ENST00000448842 249 ntBASIC5.17□□□□□ -1.58
VPS9D1Q9Y2B5 NDUFS5P3-201ENST00000450668 321 ntBASIC5.17□□□□□ -1.58
VPS9D1Q9Y2B5 AC010531.2-201ENST00000465012 153 ntBASIC5.17□□□□□ -1.58
VPS9D1Q9Y2B5 AC090525.1-201ENST00000479116 478 ntBASIC5.17□□□□□ -1.58
VPS9D1Q9Y2B5 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
VPS9D1Q9Y2B5 AC099778.2-201ENST00000610904 211 ntBASIC5.17□□□□□ -1.58
VPS9D1Q9Y2B5 MIR3529-201ENST00000637713 78 ntBASIC5.17□□□□□ -1.58
VPS9D1Q9Y2B5 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS9D1Q9Y2B5 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VPS9D1Q9Y2B5 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VPS9D1Q9Y2B5 AC106871.1-201ENST00000568324 3102 ntBASIC5.17□□□□□ -1.58
VPS9D1Q9Y2B5 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
VPS9D1Q9Y2B5 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.17□□□□□ -1.58
VPS9D1Q9Y2B5 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
VPS9D1Q9Y2B5 ADAM3A-203ENST00000461344 2157 ntBASIC5.16□□□□□ -1.58
VPS9D1Q9Y2B5 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS9D1Q9Y2B5 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS9D1Q9Y2B5 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS9D1Q9Y2B5 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS9D1Q9Y2B5 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS9D1Q9Y2B5 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS9D1Q9Y2B5 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
VPS9D1Q9Y2B5 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS9D1Q9Y2B5 RNA5SP183-201ENST00000362452 119 ntBASIC5.16□□□□□ -1.58
VPS9D1Q9Y2B5 Y_RNA.52-201ENST00000362760 96 ntBASIC5.16□□□□□ -1.58
VPS9D1Q9Y2B5 U3.3-201ENST00000362986 216 ntBASIC5.16□□□□□ -1.58
VPS9D1Q9Y2B5 SNORA63.5-201ENST00000363548 123 ntBASIC5.16□□□□□ -1.58
VPS9D1Q9Y2B5 RN7SKP113-201ENST00000363891 295 ntBASIC5.16□□□□□ -1.58
VPS9D1Q9Y2B5 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VPS9D1Q9Y2B5 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VPS9D1Q9Y2B5 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC5.16□□□□□ -1.58
VPS9D1Q9Y2B5 COX6B1P2-201ENST00000489624 230 ntBASIC5.16□□□□□ -1.58
VPS9D1Q9Y2B5 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS9D1Q9Y2B5 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC5.16□□□□□ -1.58
VPS9D1Q9Y2B5 AC025281.1-201ENST00000567026 265 ntBASIC5.16□□□□□ -1.58
VPS9D1Q9Y2B5 AC068205.3-201ENST00000636385 468 ntBASIC5.16□□□□□ -1.58
VPS9D1Q9Y2B5 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
VPS9D1Q9Y2B5 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
VPS9D1Q9Y2B5 AC118273.1-201ENST00000525324 3006 ntBASIC5.16□□□□□ -1.58
VPS9D1Q9Y2B5 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.16□□□□□ -1.58
VPS9D1Q9Y2B5 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS9D1Q9Y2B5 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
VPS9D1Q9Y2B5 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
VPS9D1Q9Y2B5 AL034549.2-201ENST00000618285 3373 ntBASIC5.16□□□□□ -1.58
VPS9D1Q9Y2B5 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
VPS9D1Q9Y2B5 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
VPS9D1Q9Y2B5 AL513302.2-201ENST00000562313 1842 ntBASIC5.16□□□□□ -1.58
VPS9D1Q9Y2B5 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.16□□□□□ -1.58
VPS9D1Q9Y2B5 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.15□□□□□ -1.58
VPS9D1Q9Y2B5 SMG1P6-201ENST00000532337 2930 ntBASIC5.15□□□□□ -1.58
VPS9D1Q9Y2B5 Y_RNA.466-201ENST00000384294 113 ntBASIC5.15□□□□□ -1.59
VPS9D1Q9Y2B5 FTH1P15-201ENST00000406984 280 ntBASIC5.15□□□□□ -1.59
VPS9D1Q9Y2B5 AC108075.1-201ENST00000424692 529 ntBASIC5.15□□□□□ -1.59
VPS9D1Q9Y2B5 AL365496.1-201ENST00000426885 215 ntBASIC5.15□□□□□ -1.59
VPS9D1Q9Y2B5 COX6CP13-201ENST00000428703 226 ntBASIC5.15□□□□□ -1.59
VPS9D1Q9Y2B5 Z75741.1-201ENST00000446793 314 ntBASIC5.15□□□□□ -1.59
VPS9D1Q9Y2B5 RN7SL515P-201ENST00000463999 297 ntBASIC5.15□□□□□ -1.59
VPS9D1Q9Y2B5 ATP5EP1-201ENST00000510257 156 ntBASIC5.15□□□□□ -1.59
VPS9D1Q9Y2B5 RNU1-103P-201ENST00000516502 125 ntBASIC5.15□□□□□ -1.59
VPS9D1Q9Y2B5 RNU6-344P-201ENST00000516635 111 ntBASIC5.15□□□□□ -1.59
VPS9D1Q9Y2B5 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.15□□□□□ -1.59
VPS9D1Q9Y2B5 AP003357.1-201ENST00000604497 148 ntBASIC5.15□□□□□ -1.59
VPS9D1Q9Y2B5 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.15□□□□□ -1.59
VPS9D1Q9Y2B5 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
VPS9D1Q9Y2B5 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
VPS9D1Q9Y2B5 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC5.15□□□□□ -1.59
VPS9D1Q9Y2B5 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
VPS9D1Q9Y2B5 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.14□□□□□ -1.59
VPS9D1Q9Y2B5 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms