Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 RNU1-107P-201ENST00000516617 154 ntBASIC2.11□□□□□ -2.07
CHMP2BQ9UQN3 AC090572.1-201ENST00000519251 160 ntBASIC2.11□□□□□ -2.07
CHMP2BQ9UQN3 AP004607.1-201ENST00000524456 203 ntBASIC2.11□□□□□ -2.07
CHMP2BQ9UQN3 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.11□□□□□ -2.07
CHMP2BQ9UQN3 AC019226.2-201ENST00000625973 424 ntBASIC2.11□□□□□ -2.07
CHMP2BQ9UQN3 RNU1-23P-201ENST00000363361 144 ntBASIC2.1□□□□□ -2.07
CHMP2BQ9UQN3 RNY4P34-201ENST00000364779 95 ntBASIC2.1□□□□□ -2.07
CHMP2BQ9UQN3 MIR186-201ENST00000384988 86 ntBASIC2.1□□□□□ -2.07
CHMP2BQ9UQN3 MIR561-201ENST00000385216 97 ntBASIC2.1□□□□□ -2.07
CHMP2BQ9UQN3 SNORA11.4-201ENST00000408823 129 ntBASIC2.1□□□□□ -2.07
CHMP2BQ9UQN3 RNU6-195P-201ENST00000411352 109 ntBASIC2.1□□□□□ -2.07
CHMP2BQ9UQN3 RPL21P90-201ENST00000415692 466 ntBASIC2.1□□□□□ -2.07
CHMP2BQ9UQN3 AL365203.2-201ENST00000423444 196 ntBASIC2.1□□□□□ -2.07
CHMP2BQ9UQN3 CYCSP46-201ENST00000423569 204 ntBASIC2.1□□□□□ -2.07
CHMP2BQ9UQN3 MTCYBP5-201ENST00000423752 1135 ntBASIC2.1□□□□□ -2.07
CHMP2BQ9UQN3 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.1□□□□□ -2.07
CHMP2BQ9UQN3 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.1□□□□□ -2.07
CHMP2BQ9UQN3 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.1□□□□□ -2.07
CHMP2BQ9UQN3 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.1□□□□□ -2.07
CHMP2BQ9UQN3 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.1□□□□□ -2.07
CHMP2BQ9UQN3 AP001486.1-201ENST00000463339 476 ntBASIC2.1□□□□□ -2.07
CHMP2BQ9UQN3 AC055731.1-201ENST00000474387 401 ntBASIC2.1□□□□□ -2.07
CHMP2BQ9UQN3 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.1□□□□□ -2.07
CHMP2BQ9UQN3 AC091965.2-201ENST00000512324 613 ntBASIC2.1□□□□□ -2.07
CHMP2BQ9UQN3 SNORA4.4-201ENST00000515921 135 ntBASIC2.1□□□□□ -2.07
CHMP2BQ9UQN3 RNU6-685P-201ENST00000517088 95 ntBASIC2.1□□□□□ -2.07
CHMP2BQ9UQN3 SNORA31.23-201ENST00000517219 133 ntBASIC2.1□□□□□ -2.07
CHMP2BQ9UQN3 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.1□□□□□ -2.07
CHMP2BQ9UQN3 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.1□□□□□ -2.07
CHMP2BQ9UQN3 MIR3126-201ENST00000577443 74 ntBASIC2.1□□□□□ -2.07
CHMP2BQ9UQN3 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.1□□□□□ -2.07
CHMP2BQ9UQN3 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.1□□□□□ -2.07
CHMP2BQ9UQN3 AC073410.2-201ENST00000603240 332 ntBASIC2.1□□□□□ -2.07
CHMP2BQ9UQN3 AC090578.1-201ENST00000604955 591 ntBASIC2.1□□□□□ -2.07
CHMP2BQ9UQN3 AC093648.1-201ENST00000623546 606 ntBASIC2.1□□□□□ -2.07
CHMP2BQ9UQN3 AL359740.1-201ENST00000624340 592 ntBASIC2.1□□□□□ -2.07
CHMP2BQ9UQN3 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.1□□□□□ -2.07
CHMP2BQ9UQN3 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CHMP2BQ9UQN3 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CHMP2BQ9UQN3 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
CHMP2BQ9UQN3 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CHMP2BQ9UQN3 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
CHMP2BQ9UQN3 SNORA25B-201ENST00000365507 128 ntBASIC2.09□□□□□ -2.07
CHMP2BQ9UQN3 RNU6-622P-201ENST00000384272 103 ntBASIC2.09□□□□□ -2.07
CHMP2BQ9UQN3 RNU5A-2P-201ENST00000384337 116 ntBASIC2.09□□□□□ -2.07
CHMP2BQ9UQN3 SNORD116-20-201ENST00000384529 92 ntBASIC2.09□□□□□ -2.07
CHMP2BQ9UQN3 AL030996.1-201ENST00000411430 235 ntBASIC2.09□□□□□ -2.07
CHMP2BQ9UQN3 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.09□□□□□ -2.07
CHMP2BQ9UQN3 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.09□□□□□ -2.07
CHMP2BQ9UQN3 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.09□□□□□ -2.07
CHMP2BQ9UQN3 AC000111.3-201ENST00000433478 193 ntBASIC2.09□□□□□ -2.07
CHMP2BQ9UQN3 AC073614.1-201ENST00000438690 650 ntBASIC2.09□□□□□ -2.07
CHMP2BQ9UQN3 AC012308.1-201ENST00000451232 178 ntBASIC2.09□□□□□ -2.07
CHMP2BQ9UQN3 ART2BP-201ENST00000453501 499 ntBASIC2.09□□□□□ -2.07
CHMP2BQ9UQN3 MTCYBP1-201ENST00000454315 1119 ntBASIC2.09□□□□□ -2.07
CHMP2BQ9UQN3 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.09□□□□□ -2.07
CHMP2BQ9UQN3 AC116562.3-201ENST00000506136 177 ntBASIC2.09□□□□□ -2.07
CHMP2BQ9UQN3 RNU2-53P-201ENST00000516257 147 ntBASIC2.09□□□□□ -2.07
CHMP2BQ9UQN3 Vault.3-201ENST00000516676 95 ntBASIC2.09□□□□□ -2.07
CHMP2BQ9UQN3 SNORA48.11-201ENST00000517015 89 ntBASIC2.09□□□□□ -2.07
CHMP2BQ9UQN3 AC107953.1-201ENST00000522216 297 ntBASIC2.09□□□□□ -2.07
CHMP2BQ9UQN3 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.09□□□□□ -2.07
CHMP2BQ9UQN3 AC068587.5-201ENST00000528506 175 ntBASIC2.09□□□□□ -2.07
CHMP2BQ9UQN3 BNIP3P6-201ENST00000549284 499 ntBASIC2.09□□□□□ -2.07
CHMP2BQ9UQN3 BNIP3P22-201ENST00000593399 556 ntBASIC2.09□□□□□ -2.07
CHMP2BQ9UQN3 AC025165.5-201ENST00000602802 578 ntBASIC2.09□□□□□ -2.07
CHMP2BQ9UQN3 AL160281.1-201ENST00000605307 311 ntBASIC2.09□□□□□ -2.07
CHMP2BQ9UQN3 AC087683.2-201ENST00000611384 326 ntBASIC2.09□□□□□ -2.07
CHMP2BQ9UQN3 AC008250.2-201ENST00000615261 205 ntBASIC2.09□□□□□ -2.07
CHMP2BQ9UQN3 uc_338.15-201ENST00000615470 191 ntBASIC2.09□□□□□ -2.07
CHMP2BQ9UQN3 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.09□□□□□ -2.07
CHMP2BQ9UQN3 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.09□□□□□ -2.07
CHMP2BQ9UQN3 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
CHMP2BQ9UQN3 RNU6-179P-201ENST00000363350 107 ntBASIC2.08□□□□□ -2.08
CHMP2BQ9UQN3 Y_RNA.576-201ENST00000384781 102 ntBASIC2.08□□□□□ -2.08
CHMP2BQ9UQN3 RNU4-53P-201ENST00000410828 140 ntBASIC2.08□□□□□ -2.08
CHMP2BQ9UQN3 AL139156.1-201ENST00000412785 841 ntBASIC2.08□□□□□ -2.08
CHMP2BQ9UQN3 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.08□□□□□ -2.08
CHMP2BQ9UQN3 ISCA1P6-201ENST00000427740 390 ntBASIC2.08□□□□□ -2.08
CHMP2BQ9UQN3 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.08□□□□□ -2.08
CHMP2BQ9UQN3 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.08□□□□□ -2.08
CHMP2BQ9UQN3 SNORA43.2-201ENST00000516652 128 ntBASIC2.08□□□□□ -2.08
CHMP2BQ9UQN3 AC109329.1-201ENST00000518744 317 ntBASIC2.08□□□□□ -2.08
CHMP2BQ9UQN3 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.08□□□□□ -2.08
CHMP2BQ9UQN3 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.08□□□□□ -2.08
CHMP2BQ9UQN3 AC087883.1-201ENST00000551882 391 ntBASIC2.08□□□□□ -2.08
CHMP2BQ9UQN3 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.08□□□□□ -2.08
CHMP2BQ9UQN3 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.08□□□□□ -2.08
CHMP2BQ9UQN3 AC098614.4-201ENST00000607601 462 ntBASIC2.08□□□□□ -2.08
CHMP2BQ9UQN3 AC108479.2-201ENST00000617314 601 ntBASIC2.08□□□□□ -2.08
CHMP2BQ9UQN3 MIR6873-201ENST00000622788 63 ntBASIC2.08□□□□□ -2.08
CHMP2BQ9UQN3 HAUS6P2-201ENST00000433254 2404 ntBASIC2.08□□□□□ -2.08
CHMP2BQ9UQN3 RNU4-21P-201ENST00000362802 126 ntBASIC2.07□□□□□ -2.08
CHMP2BQ9UQN3 SNORD115-7-201ENST00000365306 82 ntBASIC2.07□□□□□ -2.08
CHMP2BQ9UQN3 RNU6-487P-201ENST00000365430 104 ntBASIC2.07□□□□□ -2.08
CHMP2BQ9UQN3 NDUFB4P4-201ENST00000404822 243 ntBASIC2.07□□□□□ -2.08
CHMP2BQ9UQN3 AC074117.2-201ENST00000417130 397 ntBASIC2.07□□□□□ -2.08
CHMP2BQ9UQN3 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.07□□□□□ -2.08
CHMP2BQ9UQN3 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.07□□□□□ -2.08
CHMP2BQ9UQN3 AC027124.2-201ENST00000428249 105 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms