Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 RNU7-175P-201ENST00000515915 61 ntBASIC4.35□□□□□ -1.71
PCDHA4Q9UN74 Y_RNA.706-201ENST00000516933 99 ntBASIC4.35□□□□□ -1.71
PCDHA4Q9UN74 Y_RNA.713-201ENST00000517013 96 ntBASIC4.35□□□□□ -1.71
PCDHA4Q9UN74 MIR2355-201ENST00000517199 87 ntBASIC4.35□□□□□ -1.71
PCDHA4Q9UN74 AP002770.2-201ENST00000543613 532 ntBASIC4.35□□□□□ -1.71
PCDHA4Q9UN74 AC022080.3-201ENST00000544433 482 ntBASIC4.35□□□□□ -1.71
PCDHA4Q9UN74 SYF2P1-201ENST00000550658 413 ntBASIC4.35□□□□□ -1.71
PCDHA4Q9UN74 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.35□□□□□ -1.71
PCDHA4Q9UN74 AC087499.8-201ENST00000578406 226 ntBASIC4.35□□□□□ -1.71
PCDHA4Q9UN74 AC060766.3-201ENST00000591442 263 ntBASIC4.35□□□□□ -1.71
PCDHA4Q9UN74 RPL23AP78-201ENST00000599928 470 ntBASIC4.35□□□□□ -1.71
PCDHA4Q9UN74 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC4.35□□□□□ -1.71
PCDHA4Q9UN74 BMS1P21-201ENST00000634565 365 ntBASIC4.35□□□□□ -1.71
PCDHA4Q9UN74 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
PCDHA4Q9UN74 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHA4Q9UN74 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PCDHA4Q9UN74 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.35□□□□□ -1.71
PCDHA4Q9UN74 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.34□□□□□ -1.71
PCDHA4Q9UN74 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.34□□□□□ -1.71
PCDHA4Q9UN74 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PCDHA4Q9UN74 AL391987.6-201ENST00000305671 199 ntBASIC4.34□□□□□ -1.71
PCDHA4Q9UN74 snoU2_19.2-201ENST00000363024 80 ntBASIC4.34□□□□□ -1.71
PCDHA4Q9UN74 SNORD27-201ENST00000363981 72 ntBASIC4.34□□□□□ -1.71
PCDHA4Q9UN74 Y_RNA.237-201ENST00000364439 102 ntBASIC4.34□□□□□ -1.71
PCDHA4Q9UN74 Y_RNA.439-201ENST00000384119 94 ntBASIC4.34□□□□□ -1.71
PCDHA4Q9UN74 RNY3P4-201ENST00000384428 101 ntBASIC4.34□□□□□ -1.71
PCDHA4Q9UN74 Y_RNA.539-201ENST00000384635 107 ntBASIC4.34□□□□□ -1.71
PCDHA4Q9UN74 MTND5P15-201ENST00000434246 349 ntBASIC4.34□□□□□ -1.71
PCDHA4Q9UN74 Z82210.1-201ENST00000440037 231 ntBASIC4.34□□□□□ -1.71
PCDHA4Q9UN74 AL513124.1-201ENST00000450410 614 ntBASIC4.34□□□□□ -1.71
PCDHA4Q9UN74 RNU7-87P-201ENST00000459343 62 ntBASIC4.34□□□□□ -1.71
PCDHA4Q9UN74 GZMAP1-201ENST00000503054 631 ntBASIC4.34□□□□□ -1.71
PCDHA4Q9UN74 SNORA31.6-201ENST00000516241 130 ntBASIC4.34□□□□□ -1.71
PCDHA4Q9UN74 SNORA31.18-201ENST00000517043 134 ntBASIC4.34□□□□□ -1.71
PCDHA4Q9UN74 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.34□□□□□ -1.71
PCDHA4Q9UN74 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.34□□□□□ -1.71
PCDHA4Q9UN74 AC009779.6-201ENST00000603972 165 ntBASIC4.34□□□□□ -1.71
PCDHA4Q9UN74 MIR6798-201ENST00000612887 67 ntBASIC4.34□□□□□ -1.71
PCDHA4Q9UN74 SCARNA4-202ENST00000625402 129 ntBASIC4.34□□□□□ -1.71
PCDHA4Q9UN74 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
PCDHA4Q9UN74 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.34□□□□□ -1.72
PCDHA4Q9UN74 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.33□□□□□ -1.72
PCDHA4Q9UN74 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.33□□□□□ -1.72
PCDHA4Q9UN74 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.33□□□□□ -1.72
PCDHA4Q9UN74 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHA4Q9UN74 RNU6-338P-201ENST00000383888 105 ntBASIC4.33□□□□□ -1.72
PCDHA4Q9UN74 Y_RNA.785-201ENST00000384290 109 ntBASIC4.33□□□□□ -1.72
PCDHA4Q9UN74 AP000275.1-201ENST00000411943 390 ntBASIC4.33□□□□□ -1.72
PCDHA4Q9UN74 AL591419.1-201ENST00000427423 339 ntBASIC4.33□□□□□ -1.72
PCDHA4Q9UN74 AC091286.1-201ENST00000431233 461 ntBASIC4.33□□□□□ -1.72
PCDHA4Q9UN74 BX679664.1-201ENST00000434429 253 ntBASIC4.33□□□□□ -1.72
PCDHA4Q9UN74 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.33□□□□□ -1.72
PCDHA4Q9UN74 AC093023.1-201ENST00000547375 507 ntBASIC4.33□□□□□ -1.72
PCDHA4Q9UN74 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.33□□□□□ -1.72
PCDHA4Q9UN74 AC136932.1-201ENST00000574771 208 ntBASIC4.33□□□□□ -1.72
PCDHA4Q9UN74 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.33□□□□□ -1.72
PCDHA4Q9UN74 AC010900.2-201ENST00000604508 210 ntBASIC4.33□□□□□ -1.72
PCDHA4Q9UN74 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.33□□□□□ -1.72
PCDHA4Q9UN74 MIR376A1-201ENST00000616574 68 ntBASIC4.33□□□□□ -1.72
PCDHA4Q9UN74 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.33□□□□□ -1.72
PCDHA4Q9UN74 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.33□□□□□ -1.72
PCDHA4Q9UN74 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHA4Q9UN74 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHA4Q9UN74 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.33□□□□□ -1.72
PCDHA4Q9UN74 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHA4Q9UN74 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PCDHA4Q9UN74 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.33□□□□□ -1.72
PCDHA4Q9UN74 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHA4Q9UN74 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHA4Q9UN74 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHA4Q9UN74 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHA4Q9UN74 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
PCDHA4Q9UN74 RN7SKP156-201ENST00000410308 342 ntBASIC4.32□□□□□ -1.72
PCDHA4Q9UN74 AL139247.1-201ENST00000422768 325 ntBASIC4.32□□□□□ -1.72
PCDHA4Q9UN74 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.32□□□□□ -1.72
PCDHA4Q9UN74 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.32□□□□□ -1.72
PCDHA4Q9UN74 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.32□□□□□ -1.72
PCDHA4Q9UN74 ANXA2P1-201ENST00000505539 926 ntBASIC4.32□□□□□ -1.72
PCDHA4Q9UN74 BTF3L4P4-201ENST00000506381 449 ntBASIC4.32□□□□□ -1.72
PCDHA4Q9UN74 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.32□□□□□ -1.72
PCDHA4Q9UN74 RNU6-1073P-201ENST00000517182 106 ntBASIC4.32□□□□□ -1.72
PCDHA4Q9UN74 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.32□□□□□ -1.72
PCDHA4Q9UN74 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.32□□□□□ -1.72
PCDHA4Q9UN74 AC010186.2-204ENST00000537668 439 ntBASIC4.32□□□□□ -1.72
PCDHA4Q9UN74 MIR4300-201ENST00000581016 96 ntBASIC4.32□□□□□ -1.72
PCDHA4Q9UN74 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.32□□□□□ -1.72
PCDHA4Q9UN74 AL136964.1-201ENST00000622038 2990 ntBASIC4.32□□□□□ -1.72
PCDHA4Q9UN74 U6.99-201ENST00000637524 83 ntBASIC4.32□□□□□ -1.72
PCDHA4Q9UN74 LINC02555-201ENST00000563933 1951 ntBASIC4.32□□□□□ -1.72
PCDHA4Q9UN74 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.32□□□□□ -1.72
PCDHA4Q9UN74 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PCDHA4Q9UN74 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
PCDHA4Q9UN74 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDHA4Q9UN74 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDHA4Q9UN74 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDHA4Q9UN74 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDHA4Q9UN74 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDHA4Q9UN74 SNORD81.1-201ENST00000363064 77 ntBASIC4.31□□□□□ -1.72
PCDHA4Q9UN74 RNU6-105P-201ENST00000363909 104 ntBASIC4.31□□□□□ -1.72
PCDHA4Q9UN74 SNORA7.2-201ENST00000364446 145 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms