Protein–RNA interactions for Protein: Q9ULD4

BRPF3, Bromodomain and PHD finger-containing protein 3, humanhuman

Predictions only

Length 1,205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3Q9ULD4 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.76□□□□□ -1.65
BRPF3Q9ULD4 AL512844.2-201ENST00000433990 593 ntBASIC4.76□□□□□ -1.65
BRPF3Q9ULD4 TBCAP1-201ENST00000436520 327 ntBASIC4.76□□□□□ -1.65
BRPF3Q9ULD4 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.76□□□□□ -1.65
BRPF3Q9ULD4 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.76□□□□□ -1.65
BRPF3Q9ULD4 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
BRPF3Q9ULD4 RNU6-703P-201ENST00000516946 107 ntBASIC4.76□□□□□ -1.65
BRPF3Q9ULD4 AL590705.4-201ENST00000532209 134 ntBASIC4.76□□□□□ -1.65
BRPF3Q9ULD4 AC103988.1-201ENST00000566382 2177 ntBASIC4.76□□□□□ -1.65
BRPF3Q9ULD4 AC090517.1-201ENST00000569307 266 ntBASIC4.76□□□□□ -1.65
BRPF3Q9ULD4 AL390123.1-201ENST00000603216 237 ntBASIC4.76□□□□□ -1.65
BRPF3Q9ULD4 AL442067.1-201ENST00000613261 223 ntBASIC4.76□□□□□ -1.65
BRPF3Q9ULD4 AL159153.1-201ENST00000619688 317 ntBASIC4.76□□□□□ -1.65
BRPF3Q9ULD4 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
BRPF3Q9ULD4 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.76□□□□□ -1.65
BRPF3Q9ULD4 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.75□□□□□ -1.65
BRPF3Q9ULD4 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
BRPF3Q9ULD4 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
BRPF3Q9ULD4 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
BRPF3Q9ULD4 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.75□□□□□ -1.65
BRPF3Q9ULD4 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
BRPF3Q9ULD4 AC233263.6-201ENST00000631132 1963 ntBASIC4.75□□□□□ -1.65
BRPF3Q9ULD4 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.75□□□□□ -1.65
BRPF3Q9ULD4 AL356095.1-201ENST00000417217 199 ntBASIC4.75□□□□□ -1.65
BRPF3Q9ULD4 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
BRPF3Q9ULD4 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.75□□□□□ -1.65
BRPF3Q9ULD4 NDUFB4P6-201ENST00000436819 366 ntBASIC4.75□□□□□ -1.65
BRPF3Q9ULD4 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.75□□□□□ -1.65
BRPF3Q9ULD4 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC4.75□□□□□ -1.65
BRPF3Q9ULD4 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.75□□□□□ -1.65
BRPF3Q9ULD4 RNU6-388P-201ENST00000517012 105 ntBASIC4.75□□□□□ -1.65
BRPF3Q9ULD4 RNU6-389P-201ENST00000517048 105 ntBASIC4.75□□□□□ -1.65
BRPF3Q9ULD4 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.75□□□□□ -1.65
BRPF3Q9ULD4 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.75□□□□□ -1.65
BRPF3Q9ULD4 CYCSP39-201ENST00000565821 309 ntBASIC4.75□□□□□ -1.65
BRPF3Q9ULD4 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.75□□□□□ -1.65
BRPF3Q9ULD4 MIR5047-201ENST00000579212 100 ntBASIC4.75□□□□□ -1.65
BRPF3Q9ULD4 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.75□□□□□ -1.65
BRPF3Q9ULD4 AL591034.3-201ENST00000605511 685 ntBASIC4.75□□□□□ -1.65
BRPF3Q9ULD4 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.75□□□□□ -1.65
BRPF3Q9ULD4 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
BRPF3Q9ULD4 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.75□□□□□ -1.65
BRPF3Q9ULD4 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.75□□□□□ -1.65
BRPF3Q9ULD4 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
BRPF3Q9ULD4 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
BRPF3Q9ULD4 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.74□□□□□ -1.65
BRPF3Q9ULD4 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.74□□□□□ -1.65
BRPF3Q9ULD4 Z82217.1-201ENST00000625157 8149 ntBASIC4.74□□□□□ -1.65
BRPF3Q9ULD4 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
BRPF3Q9ULD4 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
BRPF3Q9ULD4 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
BRPF3Q9ULD4 SNORD35B-201ENST00000363660 87 ntBASIC4.74□□□□□ -1.65
BRPF3Q9ULD4 Y_RNA.489-201ENST00000384410 101 ntBASIC4.74□□□□□ -1.65
BRPF3Q9ULD4 MIR184-201ENST00000384962 84 ntBASIC4.74□□□□□ -1.65
BRPF3Q9ULD4 MIR1302-6-201ENST00000408466 90 ntBASIC4.74□□□□□ -1.65
BRPF3Q9ULD4 RNA5SP317-201ENST00000410176 116 ntBASIC4.74□□□□□ -1.65
BRPF3Q9ULD4 RNA5SP31-201ENST00000411144 127 ntBASIC4.74□□□□□ -1.65
BRPF3Q9ULD4 RNA5SP311-201ENST00000411290 116 ntBASIC4.74□□□□□ -1.65
BRPF3Q9ULD4 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.74□□□□□ -1.65
BRPF3Q9ULD4 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.74□□□□□ -1.65
BRPF3Q9ULD4 FCF1P4-201ENST00000448326 183 ntBASIC4.74□□□□□ -1.65
BRPF3Q9ULD4 AC010265.1-201ENST00000513509 211 ntBASIC4.74□□□□□ -1.65
BRPF3Q9ULD4 RNU6-397P-201ENST00000516226 104 ntBASIC4.74□□□□□ -1.65
BRPF3Q9ULD4 RNU2-53P-201ENST00000516257 147 ntBASIC4.74□□□□□ -1.65
BRPF3Q9ULD4 RNA5SP315-201ENST00000516340 116 ntBASIC4.74□□□□□ -1.65
BRPF3Q9ULD4 SNORA40.15-201ENST00000516884 107 ntBASIC4.74□□□□□ -1.65
BRPF3Q9ULD4 RNA5SP312-201ENST00000517068 116 ntBASIC4.74□□□□□ -1.65
BRPF3Q9ULD4 AC109329.1-201ENST00000518744 317 ntBASIC4.74□□□□□ -1.65
BRPF3Q9ULD4 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.74□□□□□ -1.65
BRPF3Q9ULD4 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.74□□□□□ -1.65
BRPF3Q9ULD4 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.74□□□□□ -1.65
BRPF3Q9ULD4 AC005357.1-201ENST00000588399 301 ntBASIC4.74□□□□□ -1.65
BRPF3Q9ULD4 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.74□□□□□ -1.65
BRPF3Q9ULD4 AC006077.1-201ENST00000604746 343 ntBASIC4.74□□□□□ -1.65
BRPF3Q9ULD4 MIR6868-201ENST00000611215 58 ntBASIC4.74□□□□□ -1.65
BRPF3Q9ULD4 MIR492-201ENST00000638676 116 ntBASIC4.74□□□□□ -1.65
BRPF3Q9ULD4 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
BRPF3Q9ULD4 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
BRPF3Q9ULD4 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
BRPF3Q9ULD4 FAM35BP-202ENST00000497389 3337 ntBASIC4.73□□□□□ -1.65
BRPF3Q9ULD4 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
BRPF3Q9ULD4 Y_RNA.26-201ENST00000362539 101 ntBASIC4.73□□□□□ -1.65
BRPF3Q9ULD4 Y_RNA.123-201ENST00000363338 102 ntBASIC4.73□□□□□ -1.65
BRPF3Q9ULD4 TMEM167AP1-201ENST00000423409 219 ntBASIC4.73□□□□□ -1.65
BRPF3Q9ULD4 RN7SKP210-201ENST00000459176 261 ntBASIC4.73□□□□□ -1.65
BRPF3Q9ULD4 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.73□□□□□ -1.65
BRPF3Q9ULD4 RPL29P14-201ENST00000495837 428 ntBASIC4.73□□□□□ -1.65
BRPF3Q9ULD4 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.73□□□□□ -1.65
BRPF3Q9ULD4 AC026726.1-201ENST00000512859 601 ntBASIC4.73□□□□□ -1.65
BRPF3Q9ULD4 RNU6-1282P-201ENST00000516735 96 ntBASIC4.73□□□□□ -1.65
BRPF3Q9ULD4 RNU6-1183P-201ENST00000517054 60 ntBASIC4.73□□□□□ -1.65
BRPF3Q9ULD4 AC010186.2-204ENST00000537668 439 ntBASIC4.73□□□□□ -1.65
BRPF3Q9ULD4 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.73□□□□□ -1.65
BRPF3Q9ULD4 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC4.73□□□□□ -1.65
BRPF3Q9ULD4 AC025627.2-201ENST00000576220 160 ntBASIC4.73□□□□□ -1.65
BRPF3Q9ULD4 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
BRPF3Q9ULD4 AC006557.5-201ENST00000603126 811 ntBASIC4.73□□□□□ -1.65
BRPF3Q9ULD4 SNORA51-201ENST00000606420 132 ntBASIC4.73□□□□□ -1.65
BRPF3Q9ULD4 RMST_8.1-201ENST00000610287 165 ntBASIC4.73□□□□□ -1.65
BRPF3Q9ULD4 FTX_3.1-201ENST00000610451 147 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms