Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
VAPAQ9P0L0 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.46□□□□□ -2.18
VAPAQ9P0L0 RNU1-98P-201ENST00000458992 160 ntBASIC1.46□□□□□ -2.18
VAPAQ9P0L0 AL121594.1-201ENST00000475906 575 ntBASIC1.46□□□□□ -2.18
VAPAQ9P0L0 AC119751.4-201ENST00000507498 357 ntBASIC1.46□□□□□ -2.18
VAPAQ9P0L0 AC008834.1-201ENST00000511612 175 ntBASIC1.46□□□□□ -2.18
VAPAQ9P0L0 RNU6-965P-201ENST00000516721 96 ntBASIC1.46□□□□□ -2.18
VAPAQ9P0L0 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.46□□□□□ -2.18
VAPAQ9P0L0 MTATP6P15-201ENST00000527233 835 ntBASIC1.46□□□□□ -2.18
VAPAQ9P0L0 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.46□□□□□ -2.18
VAPAQ9P0L0 AC012065.4-201ENST00000602445 679 ntBASIC1.46□□□□□ -2.18
VAPAQ9P0L0 AC174048.1-201ENST00000603389 144 ntBASIC1.46□□□□□ -2.18
VAPAQ9P0L0 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.46□□□□□ -2.18
VAPAQ9P0L0 MIR502-201ENST00000606349 86 ntBASIC1.46□□□□□ -2.18
VAPAQ9P0L0 U1.36-201ENST00000620684 176 ntBASIC1.46□□□□□ -2.18
VAPAQ9P0L0 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.46□□□□□ -2.18
VAPAQ9P0L0 HAUS6P2-201ENST00000433254 2404 ntBASIC1.46□□□□□ -2.18
VAPAQ9P0L0 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
VAPAQ9P0L0 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.45□□□□□ -2.18
VAPAQ9P0L0 AL356292.1-201ENST00000283110 373 ntBASIC1.45□□□□□ -2.18
VAPAQ9P0L0 RNU4-92P-201ENST00000363783 136 ntBASIC1.45□□□□□ -2.18
VAPAQ9P0L0 RNU6-944P-201ENST00000364023 107 ntBASIC1.45□□□□□ -2.18
VAPAQ9P0L0 RNY4P16-201ENST00000364768 94 ntBASIC1.45□□□□□ -2.18
VAPAQ9P0L0 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
VAPAQ9P0L0 RNU6-1242P-201ENST00000391052 103 ntBASIC1.45□□□□□ -2.18
VAPAQ9P0L0 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.45□□□□□ -2.18
VAPAQ9P0L0 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.45□□□□□ -2.18
VAPAQ9P0L0 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.45□□□□□ -2.18
VAPAQ9P0L0 AL360221.1-201ENST00000445989 335 ntBASIC1.45□□□□□ -2.18
VAPAQ9P0L0 EXOSC3P1-201ENST00000448649 500 ntBASIC1.45□□□□□ -2.18
VAPAQ9P0L0 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.45□□□□□ -2.18
VAPAQ9P0L0 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.45□□□□□ -2.18
VAPAQ9P0L0 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.45□□□□□ -2.18
VAPAQ9P0L0 AC022616.8-201ENST00000533569 253 ntBASIC1.45□□□□□ -2.18
VAPAQ9P0L0 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.45□□□□□ -2.18
VAPAQ9P0L0 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.45□□□□□ -2.18
VAPAQ9P0L0 MIR4307-201ENST00000582802 84 ntBASIC1.45□□□□□ -2.18
VAPAQ9P0L0 AL022345.1-201ENST00000607292 135 ntBASIC1.45□□□□□ -2.18
VAPAQ9P0L0 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
VAPAQ9P0L0 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.44□□□□□ -2.18
VAPAQ9P0L0 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
VAPAQ9P0L0 RNU6-212P-201ENST00000362642 104 ntBASIC1.44□□□□□ -2.18
VAPAQ9P0L0 Y_RNA.40-201ENST00000362645 93 ntBASIC1.44□□□□□ -2.18
VAPAQ9P0L0 SNORD3E-201ENST00000362899 217 ntBASIC1.44□□□□□ -2.18
VAPAQ9P0L0 RNU6-1164P-201ENST00000364428 107 ntBASIC1.44□□□□□ -2.18
VAPAQ9P0L0 RNU6-487P-201ENST00000365430 104 ntBASIC1.44□□□□□ -2.18
VAPAQ9P0L0 RNU6-72P-201ENST00000384285 79 ntBASIC1.44□□□□□ -2.18
VAPAQ9P0L0 MIR504-201ENST00000385065 83 ntBASIC1.44□□□□□ -2.18
VAPAQ9P0L0 BTF3L4P2-201ENST00000392798 346 ntBASIC1.44□□□□□ -2.18
VAPAQ9P0L0 CISD1P1-201ENST00000393907 327 ntBASIC1.44□□□□□ -2.18
VAPAQ9P0L0 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.44□□□□□ -2.18
VAPAQ9P0L0 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.44□□□□□ -2.18
VAPAQ9P0L0 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC1.44□□□□□ -2.18
VAPAQ9P0L0 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.44□□□□□ -2.18
VAPAQ9P0L0 AMD1P1-201ENST00000457220 922 ntBASIC1.44□□□□□ -2.18
VAPAQ9P0L0 USP9YP25-201ENST00000457708 443 ntBASIC1.44□□□□□ -2.18
VAPAQ9P0L0 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.44□□□□□ -2.18
VAPAQ9P0L0 RNU1-41P-201ENST00000516161 162 ntBASIC1.44□□□□□ -2.18
VAPAQ9P0L0 RNU1-48P-201ENST00000516400 162 ntBASIC1.44□□□□□ -2.18
VAPAQ9P0L0 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.44□□□□□ -2.18
VAPAQ9P0L0 AP004607.1-201ENST00000524456 203 ntBASIC1.44□□□□□ -2.18
VAPAQ9P0L0 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.44□□□□□ -2.18
VAPAQ9P0L0 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
VAPAQ9P0L0 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.44□□□□□ -2.18
VAPAQ9P0L0 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.44□□□□□ -2.18
VAPAQ9P0L0 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.44□□□□□ -2.18
VAPAQ9P0L0 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.44□□□□□ -2.18
VAPAQ9P0L0 AC018645.2-201ENST00000609151 472 ntBASIC1.44□□□□□ -2.18
VAPAQ9P0L0 AC093648.1-201ENST00000623546 606 ntBASIC1.44□□□□□ -2.18
VAPAQ9P0L0 FARSBP1-201ENST00000435808 1778 ntBASIC1.44□□□□□ -2.18
VAPAQ9P0L0 RNU1-58P-201ENST00000362413 163 ntBASIC1.43□□□□□ -2.18
VAPAQ9P0L0 RNY4P24-201ENST00000362735 96 ntBASIC1.43□□□□□ -2.18
VAPAQ9P0L0 RNU6-1210P-201ENST00000363775 107 ntBASIC1.43□□□□□ -2.18
VAPAQ9P0L0 SNORA70B-201ENST00000384210 135 ntBASIC1.43□□□□□ -2.18
VAPAQ9P0L0 RNU6-622P-201ENST00000384272 103 ntBASIC1.43□□□□□ -2.18
VAPAQ9P0L0 SNORD116-20-201ENST00000384529 92 ntBASIC1.43□□□□□ -2.18
VAPAQ9P0L0 RPS20P2-201ENST00000402520 389 ntBASIC1.43□□□□□ -2.18
VAPAQ9P0L0 MIR1323-201ENST00000408090 73 ntBASIC1.43□□□□□ -2.18
VAPAQ9P0L0 MIR1304-201ENST00000408243 91 ntBASIC1.43□□□□□ -2.18
VAPAQ9P0L0 AC006366.1-201ENST00000422002 759 ntBASIC1.43□□□□□ -2.18
VAPAQ9P0L0 RPL23AP30-201ENST00000432419 501 ntBASIC1.43□□□□□ -2.18
VAPAQ9P0L0 MTCO3P5-201ENST00000433620 714 ntBASIC1.43□□□□□ -2.18
VAPAQ9P0L0 AL008629.1-201ENST00000438615 184 ntBASIC1.43□□□□□ -2.18
VAPAQ9P0L0 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.43□□□□□ -2.18
VAPAQ9P0L0 TRBV12-1-201ENST00000479785 344 ntBASIC1.43□□□□□ -2.18
VAPAQ9P0L0 AC023790.1-201ENST00000482174 347 ntBASIC1.43□□□□□ -2.18
VAPAQ9P0L0 AC134050.1-201ENST00000495088 933 ntBASIC1.43□□□□□ -2.18
VAPAQ9P0L0 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.43□□□□□ -2.18
VAPAQ9P0L0 RNU2-10P-201ENST00000516375 211 ntBASIC1.43□□□□□ -2.18
VAPAQ9P0L0 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.43□□□□□ -2.18
VAPAQ9P0L0 CR383656.8-201ENST00000549046 145 ntBASIC1.43□□□□□ -2.18
VAPAQ9P0L0 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.43□□□□□ -2.18
VAPAQ9P0L0 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.43□□□□□ -2.18
VAPAQ9P0L0 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.43□□□□□ -2.18
VAPAQ9P0L0 CYP2C61P-201ENST00000604072 290 ntBASIC1.43□□□□□ -2.18
VAPAQ9P0L0 AC016925.2-201ENST00000605108 242 ntBASIC1.43□□□□□ -2.18
VAPAQ9P0L0 BX248123.2-201ENST00000606318 124 ntBASIC1.43□□□□□ -2.18
VAPAQ9P0L0 AC099842.1-201ENST00000619919 596 ntBASIC1.43□□□□□ -2.18
VAPAQ9P0L0 AC103706.2-201ENST00000638080 240 ntBASIC1.43□□□□□ -2.18
VAPAQ9P0L0 MIR412-201ENST00000362142 91 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 144.5 ms