Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 AC004584.2-201ENST00000570407 410 ntBASIC4.72□□□□□ -1.65
ATG3Q9NT62 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.72□□□□□ -1.65
ATG3Q9NT62 AC020914.4-201ENST00000597690 277 ntBASIC4.72□□□□□ -1.65
ATG3Q9NT62 SNRPGP15-201ENST00000600149 222 ntBASIC4.72□□□□□ -1.65
ATG3Q9NT62 BX284668.6-201ENST00000606899 438 ntBASIC4.72□□□□□ -1.65
ATG3Q9NT62 AC021753.1-201ENST00000635724 168 ntBASIC4.72□□□□□ -1.65
ATG3Q9NT62 AP000553.6-201ENST00000641242 118 ntBASIC4.72□□□□□ -1.65
ATG3Q9NT62 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.72□□□□□ -1.65
ATG3Q9NT62 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.72□□□□□ -1.65
ATG3Q9NT62 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
ATG3Q9NT62 AL133383.2-201ENST00000622958 2336 ntBASIC4.72□□□□□ -1.65
ATG3Q9NT62 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
ATG3Q9NT62 Y_RNA.83-201ENST00000363005 113 ntBASIC4.71□□□□□ -1.66
ATG3Q9NT62 Y_RNA.111-201ENST00000363248 100 ntBASIC4.71□□□□□ -1.66
ATG3Q9NT62 Y_RNA.533-201ENST00000384596 114 ntBASIC4.71□□□□□ -1.66
ATG3Q9NT62 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
ATG3Q9NT62 BX842559.1-201ENST00000419615 532 ntBASIC4.71□□□□□ -1.66
ATG3Q9NT62 RPS6P12-201ENST00000432491 726 ntBASIC4.71□□□□□ -1.66
ATG3Q9NT62 AL162389.1-201ENST00000449233 177 ntBASIC4.71□□□□□ -1.66
ATG3Q9NT62 AL136097.1-201ENST00000456945 913 ntBASIC4.71□□□□□ -1.66
ATG3Q9NT62 RNU7-120P-201ENST00000459334 63 ntBASIC4.71□□□□□ -1.66
ATG3Q9NT62 HMGN2P13-201ENST00000476476 274 ntBASIC4.71□□□□□ -1.66
ATG3Q9NT62 MIR2114-201ENST00000516645 80 ntBASIC4.71□□□□□ -1.66
ATG3Q9NT62 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.71□□□□□ -1.66
ATG3Q9NT62 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.71□□□□□ -1.66
ATG3Q9NT62 AC067852.3-201ENST00000589177 561 ntBASIC4.71□□□□□ -1.66
ATG3Q9NT62 MIR3976-201ENST00000606807 139 ntBASIC4.71□□□□□ -1.66
ATG3Q9NT62 AL591516.1-201ENST00000611326 274 ntBASIC4.71□□□□□ -1.66
ATG3Q9NT62 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.71□□□□□ -1.66
ATG3Q9NT62 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.71□□□□□ -1.66
ATG3Q9NT62 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.71□□□□□ -1.66
ATG3Q9NT62 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
ATG3Q9NT62 AC008725.1-201ENST00000605123 2263 ntBASIC4.71□□□□□ -1.66
ATG3Q9NT62 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
ATG3Q9NT62 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.71□□□□□ -1.66
ATG3Q9NT62 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
ATG3Q9NT62 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
ATG3Q9NT62 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC4.7□□□□□ -1.66
ATG3Q9NT62 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ATG3Q9NT62 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.7□□□□□ -1.66
ATG3Q9NT62 RNA5SP322-201ENST00000363617 119 ntBASIC4.7□□□□□ -1.66
ATG3Q9NT62 RNU6-335P-201ENST00000364563 113 ntBASIC4.7□□□□□ -1.66
ATG3Q9NT62 Y_RNA.458-201ENST00000384240 102 ntBASIC4.7□□□□□ -1.66
ATG3Q9NT62 MIR3074-201ENST00000384885 81 ntBASIC4.7□□□□□ -1.66
ATG3Q9NT62 RNA5SP239-201ENST00000410218 129 ntBASIC4.7□□□□□ -1.66
ATG3Q9NT62 RNU6-325P-201ENST00000411132 105 ntBASIC4.7□□□□□ -1.66
ATG3Q9NT62 AC096920.1-201ENST00000423991 241 ntBASIC4.7□□□□□ -1.66
ATG3Q9NT62 AC017083.1-201ENST00000428093 483 ntBASIC4.7□□□□□ -1.66
ATG3Q9NT62 AC092423.1-201ENST00000430165 186 ntBASIC4.7□□□□□ -1.66
ATG3Q9NT62 DAP3P1-201ENST00000441522 278 ntBASIC4.7□□□□□ -1.66
ATG3Q9NT62 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.7□□□□□ -1.66
ATG3Q9NT62 SNORA31.6-201ENST00000516241 130 ntBASIC4.7□□□□□ -1.66
ATG3Q9NT62 RNU6-346P-201ENST00000516288 111 ntBASIC4.7□□□□□ -1.66
ATG3Q9NT62 RNU6-1338P-201ENST00000516328 91 ntBASIC4.7□□□□□ -1.66
ATG3Q9NT62 RN7SKP60-201ENST00000516985 239 ntBASIC4.7□□□□□ -1.66
ATG3Q9NT62 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ATG3Q9NT62 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.7□□□□□ -1.66
ATG3Q9NT62 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.7□□□□□ -1.66
ATG3Q9NT62 AMZ2P1-203ENST00000565833 850 ntBASIC4.7□□□□□ -1.66
ATG3Q9NT62 YPEL5P2-201ENST00000605553 359 ntBASIC4.7□□□□□ -1.66
ATG3Q9NT62 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.7□□□□□ -1.66
ATG3Q9NT62 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ATG3Q9NT62 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
ATG3Q9NT62 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ATG3Q9NT62 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ATG3Q9NT62 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
ATG3Q9NT62 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
ATG3Q9NT62 Y_RNA.170-201ENST00000363746 110 ntBASIC4.69□□□□□ -1.66
ATG3Q9NT62 RNU6-629P-201ENST00000384061 103 ntBASIC4.69□□□□□ -1.66
ATG3Q9NT62 SNORD115-46-201ENST00000390982 71 ntBASIC4.69□□□□□ -1.66
ATG3Q9NT62 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.69□□□□□ -1.66
ATG3Q9NT62 RNU4-65P-201ENST00000410473 140 ntBASIC4.69□□□□□ -1.66
ATG3Q9NT62 AC092447.6-201ENST00000414578 210 ntBASIC4.69□□□□□ -1.66
ATG3Q9NT62 RPL21P90-201ENST00000415692 466 ntBASIC4.69□□□□□ -1.66
ATG3Q9NT62 COX6CP10-201ENST00000416832 224 ntBASIC4.69□□□□□ -1.66
ATG3Q9NT62 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.69□□□□□ -1.66
ATG3Q9NT62 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.69□□□□□ -1.66
ATG3Q9NT62 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.69□□□□□ -1.66
ATG3Q9NT62 RPL21P41-201ENST00000459863 264 ntBASIC4.69□□□□□ -1.66
ATG3Q9NT62 RPL21P10-201ENST00000463521 490 ntBASIC4.69□□□□□ -1.66
ATG3Q9NT62 AC025518.1-201ENST00000479856 347 ntBASIC4.69□□□□□ -1.66
ATG3Q9NT62 MTND3P25-201ENST00000509243 135 ntBASIC4.69□□□□□ -1.66
ATG3Q9NT62 AC008716.1-201ENST00000511084 513 ntBASIC4.69□□□□□ -1.66
ATG3Q9NT62 Y_RNA.713-201ENST00000517013 96 ntBASIC4.69□□□□□ -1.66
ATG3Q9NT62 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.69□□□□□ -1.66
ATG3Q9NT62 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.69□□□□□ -1.66
ATG3Q9NT62 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.69□□□□□ -1.66
ATG3Q9NT62 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.69□□□□□ -1.66
ATG3Q9NT62 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.69□□□□□ -1.66
ATG3Q9NT62 AC136932.1-201ENST00000574771 208 ntBASIC4.69□□□□□ -1.66
ATG3Q9NT62 MIR5701-3-201ENST00000578890 82 ntBASIC4.69□□□□□ -1.66
ATG3Q9NT62 MIR5701-1-201ENST00000585138 82 ntBASIC4.69□□□□□ -1.66
ATG3Q9NT62 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.69□□□□□ -1.66
ATG3Q9NT62 MIR5701-2-201ENST00000615634 82 ntBASIC4.69□□□□□ -1.66
ATG3Q9NT62 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.69□□□□□ -1.66
ATG3Q9NT62 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.69□□□□□ -1.66
ATG3Q9NT62 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
ATG3Q9NT62 AC090740.1-201ENST00000623193 2262 ntBASIC4.69□□□□□ -1.66
ATG3Q9NT62 AL133412.1-201ENST00000380194 2992 ntBASIC4.68□□□□□ -1.66
ATG3Q9NT62 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms