Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 SNORD18A-201ENST00000363753 72 ntBASIC0.28□□□□□ -2.36
CDC42SE2Q9NRR3 RNU6-296P-201ENST00000384608 107 ntBASIC0.28□□□□□ -2.36
CDC42SE2Q9NRR3 MIR10B-201ENST00000385011 110 ntBASIC0.28□□□□□ -2.36
CDC42SE2Q9NRR3 UBE2V1P11-201ENST00000411559 285 ntBASIC0.28□□□□□ -2.36
CDC42SE2Q9NRR3 AC114482.1-201ENST00000418010 247 ntBASIC0.28□□□□□ -2.36
CDC42SE2Q9NRR3 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.28□□□□□ -2.36
CDC42SE2Q9NRR3 AC010099.3-201ENST00000423896 409 ntBASIC0.28□□□□□ -2.36
CDC42SE2Q9NRR3 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.28□□□□□ -2.36
CDC42SE2Q9NRR3 MTND2P5-201ENST00000432656 1006 ntBASIC0.28□□□□□ -2.36
CDC42SE2Q9NRR3 AC092628.1-201ENST00000436250 252 ntBASIC0.28□□□□□ -2.36
CDC42SE2Q9NRR3 AL096829.2-201ENST00000446582 742 ntBASIC0.28□□□□□ -2.36
CDC42SE2Q9NRR3 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
CDC42SE2Q9NRR3 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.28□□□□□ -2.36
CDC42SE2Q9NRR3 COX6CP6-201ENST00000490840 228 ntBASIC0.28□□□□□ -2.36
CDC42SE2Q9NRR3 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.28□□□□□ -2.36
CDC42SE2Q9NRR3 RNU5B-3P-201ENST00000516601 115 ntBASIC0.28□□□□□ -2.36
CDC42SE2Q9NRR3 RNU6-1092P-201ENST00000516955 87 ntBASIC0.28□□□□□ -2.36
CDC42SE2Q9NRR3 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC0.28□□□□□ -2.36
CDC42SE2Q9NRR3 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC0.28□□□□□ -2.36
CDC42SE2Q9NRR3 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC0.28□□□□□ -2.36
CDC42SE2Q9NRR3 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.28□□□□□ -2.36
CDC42SE2Q9NRR3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.28□□□□□ -2.36
CDC42SE2Q9NRR3 AC093519.1-201ENST00000566109 298 ntBASIC0.28□□□□□ -2.36
CDC42SE2Q9NRR3 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.28□□□□□ -2.36
CDC42SE2Q9NRR3 MIR4714-201ENST00000580728 77 ntBASIC0.28□□□□□ -2.36
CDC42SE2Q9NRR3 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC0.28□□□□□ -2.36
CDC42SE2Q9NRR3 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC0.28□□□□□ -2.36
CDC42SE2Q9NRR3 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.28□□□□□ -2.36
CDC42SE2Q9NRR3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.28□□□□□ -2.36
CDC42SE2Q9NRR3 AC136443.5-201ENST00000603741 370 ntBASIC0.28□□□□□ -2.36
CDC42SE2Q9NRR3 AC022387.2-201ENST00000604050 448 ntBASIC0.28□□□□□ -2.36
CDC42SE2Q9NRR3 AC010133.1-201ENST00000615809 842 ntBASIC0.28□□□□□ -2.36
CDC42SE2Q9NRR3 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.28□□□□□ -2.36
CDC42SE2Q9NRR3 AC130454.1-201ENST00000622948 401 ntBASIC0.28□□□□□ -2.36
CDC42SE2Q9NRR3 LINC00216-201ENST00000623548 1126 ntBASIC0.28□□□□□ -2.36
CDC42SE2Q9NRR3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.28□□□□□ -2.36
CDC42SE2Q9NRR3 PCF11-AS1-201ENST00000602322 1516 ntBASIC0.28□□□□□ -2.37
CDC42SE2Q9NRR3 MTND5P11-201ENST00000511037 1812 ntBASIC0.27□□□□□ -2.37
CDC42SE2Q9NRR3 RNA5SP347-201ENST00000362445 119 ntBASIC0.27□□□□□ -2.37
CDC42SE2Q9NRR3 RNA5SP493-201ENST00000364115 91 ntBASIC0.27□□□□□ -2.37
CDC42SE2Q9NRR3 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.27□□□□□ -2.37
CDC42SE2Q9NRR3 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.27□□□□□ -2.37
CDC42SE2Q9NRR3 AC008267.5-201ENST00000424928 265 ntBASIC0.27□□□□□ -2.37
CDC42SE2Q9NRR3 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.27□□□□□ -2.37
CDC42SE2Q9NRR3 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC0.27□□□□□ -2.37
CDC42SE2Q9NRR3 AL050341.1-201ENST00000447743 313 ntBASIC0.27□□□□□ -2.37
CDC42SE2Q9NRR3 SNRPFP3-201ENST00000457792 225 ntBASIC0.27□□□□□ -2.37
CDC42SE2Q9NRR3 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC0.27□□□□□ -2.37
CDC42SE2Q9NRR3 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.27□□□□□ -2.37
CDC42SE2Q9NRR3 RNU6-1053P-201ENST00000515930 101 ntBASIC0.27□□□□□ -2.37
CDC42SE2Q9NRR3 RNA5SP503-201ENST00000517047 117 ntBASIC0.27□□□□□ -2.37
CDC42SE2Q9NRR3 SNORA70.22-201ENST00000517160 124 ntBASIC0.27□□□□□ -2.37
CDC42SE2Q9NRR3 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.27□□□□□ -2.37
CDC42SE2Q9NRR3 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.27□□□□□ -2.37
CDC42SE2Q9NRR3 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.27□□□□□ -2.37
CDC42SE2Q9NRR3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.27□□□□□ -2.37
CDC42SE2Q9NRR3 AC095057.3-201ENST00000567102 1157 ntBASIC0.27□□□□□ -2.37
CDC42SE2Q9NRR3 MTATP6P3-201ENST00000581686 676 ntBASIC0.27□□□□□ -2.37
CDC42SE2Q9NRR3 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.27□□□□□ -2.37
CDC42SE2Q9NRR3 AL133445.2-201ENST00000611191 527 ntBASIC0.27□□□□□ -2.37
CDC42SE2Q9NRR3 AC083806.3-201ENST00000614016 455 ntBASIC0.27□□□□□ -2.37
CDC42SE2Q9NRR3 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.27□□□□□ -2.37
CDC42SE2Q9NRR3 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.27□□□□□ -2.37
CDC42SE2Q9NRR3 OR4G1P-203ENST00000641984 1631 ntBASIC0.27□□□□□ -2.37
CDC42SE2Q9NRR3 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.26□□□□□ -2.37
CDC42SE2Q9NRR3 RNU6-1280P-201ENST00000365211 107 ntBASIC0.26□□□□□ -2.37
CDC42SE2Q9NRR3 Y_RNA.338-201ENST00000365320 114 ntBASIC0.26□□□□□ -2.37
CDC42SE2Q9NRR3 RNU6-110P-201ENST00000384508 104 ntBASIC0.26□□□□□ -2.37
CDC42SE2Q9NRR3 RNU6-1274P-201ENST00000384557 107 ntBASIC0.26□□□□□ -2.37
CDC42SE2Q9NRR3 RNU6-160P-201ENST00000384591 107 ntBASIC0.26□□□□□ -2.37
CDC42SE2Q9NRR3 MIR16-1-201ENST00000385271 89 ntBASIC0.26□□□□□ -2.37
CDC42SE2Q9NRR3 TMSB4XP8-201ENST00000402089 135 ntBASIC0.26□□□□□ -2.37
CDC42SE2Q9NRR3 RPS3AP1-201ENST00000413190 320 ntBASIC0.26□□□□□ -2.37
CDC42SE2Q9NRR3 TMSB4XP6-201ENST00000415187 135 ntBASIC0.26□□□□□ -2.37
CDC42SE2Q9NRR3 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.26□□□□□ -2.37
CDC42SE2Q9NRR3 BTF3L4P3-201ENST00000418879 476 ntBASIC0.26□□□□□ -2.37
CDC42SE2Q9NRR3 EBAG9P1-201ENST00000418955 543 ntBASIC0.26□□□□□ -2.37
CDC42SE2Q9NRR3 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.26□□□□□ -2.37
CDC42SE2Q9NRR3 TMSB4XP1-201ENST00000424567 135 ntBASIC0.26□□□□□ -2.37
CDC42SE2Q9NRR3 AC093422.3-201ENST00000428506 305 ntBASIC0.26□□□□□ -2.37
CDC42SE2Q9NRR3 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.26□□□□□ -2.37
CDC42SE2Q9NRR3 CBX3P6-201ENST00000430257 527 ntBASIC0.26□□□□□ -2.37
CDC42SE2Q9NRR3 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC0.26□□□□□ -2.37
CDC42SE2Q9NRR3 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC0.26□□□□□ -2.37
CDC42SE2Q9NRR3 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.26□□□□□ -2.37
CDC42SE2Q9NRR3 RPL7P43-201ENST00000478876 753 ntBASIC0.26□□□□□ -2.37
CDC42SE2Q9NRR3 AC010460.2-201ENST00000509054 677 ntBASIC0.26□□□□□ -2.37
CDC42SE2Q9NRR3 RNU4-57P-201ENST00000515980 135 ntBASIC0.26□□□□□ -2.37
CDC42SE2Q9NRR3 AC044913.1-201ENST00000557200 430 ntBASIC0.26□□□□□ -2.37
CDC42SE2Q9NRR3 MIR3169-201ENST00000578032 83 ntBASIC0.26□□□□□ -2.37
CDC42SE2Q9NRR3 BNIP3P24-201ENST00000593398 557 ntBASIC0.26□□□□□ -2.37
CDC42SE2Q9NRR3 AC012065.4-201ENST00000602445 679 ntBASIC0.26□□□□□ -2.37
CDC42SE2Q9NRR3 AC104465.1-201ENST00000611365 139 ntBASIC0.26□□□□□ -2.37
CDC42SE2Q9NRR3 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.26□□□□□ -2.37
CDC42SE2Q9NRR3 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.26□□□□□ -2.37
CDC42SE2Q9NRR3 SGO1P1-201ENST00000603525 1447 ntBASIC0.26□□□□□ -2.37
CDC42SE2Q9NRR3 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
CDC42SE2Q9NRR3 MIR337-201ENST00000362281 93 ntBASIC0.25□□□□□ -2.37
CDC42SE2Q9NRR3 RNA5SP361-201ENST00000362686 118 ntBASIC0.25□□□□□ -2.37
CDC42SE2Q9NRR3 RNU6-942P-201ENST00000363002 107 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms