Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
POLE3Q9NRF9 SNORD56.1-201ENST00000362913 68 ntBASIC2.07□□□□□ -2.08
POLE3Q9NRF9 RNU6-179P-201ENST00000363350 107 ntBASIC2.07□□□□□ -2.08
POLE3Q9NRF9 RNU6-1210P-201ENST00000363775 107 ntBASIC2.07□□□□□ -2.08
POLE3Q9NRF9 RNU6-1274P-201ENST00000384557 107 ntBASIC2.07□□□□□ -2.08
POLE3Q9NRF9 RNA5SP390-201ENST00000410191 113 ntBASIC2.07□□□□□ -2.08
POLE3Q9NRF9 Y_RNA.598-201ENST00000410480 95 ntBASIC2.07□□□□□ -2.08
POLE3Q9NRF9 RNU2-23P-201ENST00000410545 195 ntBASIC2.07□□□□□ -2.08
POLE3Q9NRF9 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
POLE3Q9NRF9 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.07□□□□□ -2.08
POLE3Q9NRF9 AC074117.2-201ENST00000417130 397 ntBASIC2.07□□□□□ -2.08
POLE3Q9NRF9 XKRYP1-201ENST00000423438 492 ntBASIC2.07□□□□□ -2.08
POLE3Q9NRF9 XKRYP2-201ENST00000432915 492 ntBASIC2.07□□□□□ -2.08
POLE3Q9NRF9 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.07□□□□□ -2.08
POLE3Q9NRF9 MTCO3P5-201ENST00000433620 714 ntBASIC2.07□□□□□ -2.08
POLE3Q9NRF9 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.07□□□□□ -2.08
POLE3Q9NRF9 AL353689.1-201ENST00000438895 199 ntBASIC2.07□□□□□ -2.08
POLE3Q9NRF9 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.07□□□□□ -2.08
POLE3Q9NRF9 AL121594.1-201ENST00000475906 575 ntBASIC2.07□□□□□ -2.08
POLE3Q9NRF9 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.07□□□□□ -2.08
POLE3Q9NRF9 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.07□□□□□ -2.08
POLE3Q9NRF9 AC008413.1-201ENST00000511864 177 ntBASIC2.07□□□□□ -2.08
POLE3Q9NRF9 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.07□□□□□ -2.08
POLE3Q9NRF9 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.07□□□□□ -2.08
POLE3Q9NRF9 BNIP3P6-201ENST00000549284 499 ntBASIC2.07□□□□□ -2.08
POLE3Q9NRF9 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.07□□□□□ -2.08
POLE3Q9NRF9 AC005771.1-201ENST00000585581 349 ntBASIC2.07□□□□□ -2.08
POLE3Q9NRF9 AC243960.4-201ENST00000600532 288 ntBASIC2.07□□□□□ -2.08
POLE3Q9NRF9 AL133173.2-201ENST00000614270 90 ntBASIC2.07□□□□□ -2.08
POLE3Q9NRF9 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.07□□□□□ -2.08
POLE3Q9NRF9 AC008555.8-201ENST00000623602 2168 ntBASIC2.07□□□□□ -2.08
POLE3Q9NRF9 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.07□□□□□ -2.08
POLE3Q9NRF9 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.06□□□□□ -2.08
POLE3Q9NRF9 Y_RNA.22-201ENST00000362492 102 ntBASIC2.06□□□□□ -2.08
POLE3Q9NRF9 RNU6-61P-201ENST00000365528 109 ntBASIC2.06□□□□□ -2.08
POLE3Q9NRF9 OR5H15-201ENST00000383696 930 ntBASIC2.06□□□□□ -2.08
POLE3Q9NRF9 RNU6-546P-201ENST00000383991 107 ntBASIC2.06□□□□□ -2.08
POLE3Q9NRF9 Y_RNA.510-201ENST00000384511 114 ntBASIC2.06□□□□□ -2.08
POLE3Q9NRF9 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
POLE3Q9NRF9 RAP1BP3-201ENST00000407180 549 ntBASIC2.06□□□□□ -2.08
POLE3Q9NRF9 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.06□□□□□ -2.08
POLE3Q9NRF9 HMGN2P19-201ENST00000425149 265 ntBASIC2.06□□□□□ -2.08
POLE3Q9NRF9 USP9YP8-201ENST00000441913 500 ntBASIC2.06□□□□□ -2.08
POLE3Q9NRF9 AL360271.2-201ENST00000447710 161 ntBASIC2.06□□□□□ -2.08
POLE3Q9NRF9 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.06□□□□□ -2.08
POLE3Q9NRF9 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.06□□□□□ -2.08
POLE3Q9NRF9 RPL23AP3-201ENST00000453844 468 ntBASIC2.06□□□□□ -2.08
POLE3Q9NRF9 AL049873.1-201ENST00000480540 376 ntBASIC2.06□□□□□ -2.08
POLE3Q9NRF9 AC104435.1-201ENST00000483483 166 ntBASIC2.06□□□□□ -2.08
POLE3Q9NRF9 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
POLE3Q9NRF9 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.06□□□□□ -2.08
POLE3Q9NRF9 CYCSP27-201ENST00000527643 293 ntBASIC2.06□□□□□ -2.08
POLE3Q9NRF9 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.06□□□□□ -2.08
POLE3Q9NRF9 AC090616.2-202ENST00000584248 222 ntBASIC2.06□□□□□ -2.08
POLE3Q9NRF9 AC009977.1-201ENST00000586015 570 ntBASIC2.06□□□□□ -2.08
POLE3Q9NRF9 AC005034.5-201ENST00000604219 466 ntBASIC2.06□□□□□ -2.08
POLE3Q9NRF9 AL022161.1-201ENST00000604390 213 ntBASIC2.06□□□□□ -2.08
POLE3Q9NRF9 AL451064.1-201ENST00000607718 471 ntBASIC2.06□□□□□ -2.08
POLE3Q9NRF9 AC012360.2-201ENST00000609349 391 ntBASIC2.06□□□□□ -2.08
POLE3Q9NRF9 Z82243.1-201ENST00000609432 473 ntBASIC2.06□□□□□ -2.08
POLE3Q9NRF9 AC004908.3-201ENST00000610248 625 ntBASIC2.06□□□□□ -2.08
POLE3Q9NRF9 AC007792.1-201ENST00000623023 402 ntBASIC2.06□□□□□ -2.08
POLE3Q9NRF9 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
POLE3Q9NRF9 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.05□□□□□ -2.08
POLE3Q9NRF9 Y_RNA.560-201ENST00000384689 102 ntBASIC2.05□□□□□ -2.08
POLE3Q9NRF9 MTND5P25-201ENST00000430499 799 ntBASIC2.05□□□□□ -2.08
POLE3Q9NRF9 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.05□□□□□ -2.08
POLE3Q9NRF9 RPL23AP6-201ENST00000446637 472 ntBASIC2.05□□□□□ -2.08
POLE3Q9NRF9 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.05□□□□□ -2.08
POLE3Q9NRF9 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.05□□□□□ -2.08
POLE3Q9NRF9 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.05□□□□□ -2.08
POLE3Q9NRF9 RNU6-1220P-201ENST00000517126 108 ntBASIC2.05□□□□□ -2.08
POLE3Q9NRF9 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.05□□□□□ -2.08
POLE3Q9NRF9 SNRPGP18-201ENST00000553000 214 ntBASIC2.05□□□□□ -2.08
POLE3Q9NRF9 MIR4299-201ENST00000577899 72 ntBASIC2.05□□□□□ -2.08
POLE3Q9NRF9 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
POLE3Q9NRF9 AC131159.1-201ENST00000621854 213 ntBASIC2.05□□□□□ -2.08
POLE3Q9NRF9 AC093648.1-201ENST00000623546 606 ntBASIC2.05□□□□□ -2.08
POLE3Q9NRF9 AL359740.1-201ENST00000624340 592 ntBASIC2.05□□□□□ -2.08
POLE3Q9NRF9 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.05□□□□□ -2.08
POLE3Q9NRF9 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
POLE3Q9NRF9 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC2.05□□□□□ -2.08
POLE3Q9NRF9 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
POLE3Q9NRF9 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
POLE3Q9NRF9 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
POLE3Q9NRF9 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
POLE3Q9NRF9 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
POLE3Q9NRF9 Y_RNA.40-201ENST00000362645 93 ntBASIC2.04□□□□□ -2.08
POLE3Q9NRF9 RNU6-371P-201ENST00000364283 108 ntBASIC2.04□□□□□ -2.08
POLE3Q9NRF9 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
POLE3Q9NRF9 CBX3P9-201ENST00000402326 552 ntBASIC2.04□□□□□ -2.08
POLE3Q9NRF9 EEF1A1P40-201ENST00000412883 573 ntBASIC2.04□□□□□ -2.08
POLE3Q9NRF9 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.04□□□□□ -2.08
POLE3Q9NRF9 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.04□□□□□ -2.08
POLE3Q9NRF9 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.04□□□□□ -2.08
POLE3Q9NRF9 MTND1P30-201ENST00000441241 901 ntBASIC2.04□□□□□ -2.08
POLE3Q9NRF9 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.04□□□□□ -2.08
POLE3Q9NRF9 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.04□□□□□ -2.08
POLE3Q9NRF9 TAF9P1-201ENST00000445421 515 ntBASIC2.04□□□□□ -2.08
POLE3Q9NRF9 TAF9P2-201ENST00000454958 515 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms