Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.13□□□□□ -1.75
PDLIM7Q9NR12 RNU6-397P-201ENST00000516226 104 ntBASIC4.13□□□□□ -1.75
PDLIM7Q9NR12 SNORA40.15-201ENST00000516884 107 ntBASIC4.13□□□□□ -1.75
PDLIM7Q9NR12 AC144568.1-201ENST00000520139 137 ntBASIC4.13□□□□□ -1.75
PDLIM7Q9NR12 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.13□□□□□ -1.75
PDLIM7Q9NR12 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.13□□□□□ -1.75
PDLIM7Q9NR12 AC090517.1-201ENST00000569307 266 ntBASIC4.13□□□□□ -1.75
PDLIM7Q9NR12 YPEL5P2-201ENST00000605553 359 ntBASIC4.13□□□□□ -1.75
PDLIM7Q9NR12 RNU6-6P-201ENST00000606623 107 ntBASIC4.13□□□□□ -1.75
PDLIM7Q9NR12 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.13□□□□□ -1.75
PDLIM7Q9NR12 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
PDLIM7Q9NR12 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PDLIM7Q9NR12 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
PDLIM7Q9NR12 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.13□□□□□ -1.75
PDLIM7Q9NR12 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
PDLIM7Q9NR12 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
PDLIM7Q9NR12 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.12□□□□□ -1.75
PDLIM7Q9NR12 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
PDLIM7Q9NR12 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PDLIM7Q9NR12 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PDLIM7Q9NR12 OR56A5-201ENST00000340110 738 ntBASIC4.12□□□□□ -1.75
PDLIM7Q9NR12 Y_RNA.19-201ENST00000362462 99 ntBASIC4.12□□□□□ -1.75
PDLIM7Q9NR12 RNU6-384P-201ENST00000364900 104 ntBASIC4.12□□□□□ -1.75
PDLIM7Q9NR12 Y_RNA.500-201ENST00000384466 111 ntBASIC4.12□□□□□ -1.75
PDLIM7Q9NR12 Y_RNA.526-201ENST00000384572 110 ntBASIC4.12□□□□□ -1.75
PDLIM7Q9NR12 RNA5SP424-201ENST00000390988 115 ntBASIC4.12□□□□□ -1.75
PDLIM7Q9NR12 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
PDLIM7Q9NR12 RNU6-1025P-201ENST00000410629 104 ntBASIC4.12□□□□□ -1.75
PDLIM7Q9NR12 AL096701.2-201ENST00000416920 238 ntBASIC4.12□□□□□ -1.75
PDLIM7Q9NR12 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.12□□□□□ -1.75
PDLIM7Q9NR12 AC005300.1-201ENST00000428401 373 ntBASIC4.12□□□□□ -1.75
PDLIM7Q9NR12 AC092423.1-201ENST00000430165 186 ntBASIC4.12□□□□□ -1.75
PDLIM7Q9NR12 AC092573.2-201ENST00000434546 243 ntBASIC4.12□□□□□ -1.75
PDLIM7Q9NR12 AL356535.1-201ENST00000440335 398 ntBASIC4.12□□□□□ -1.75
PDLIM7Q9NR12 RPL21P10-201ENST00000463521 490 ntBASIC4.12□□□□□ -1.75
PDLIM7Q9NR12 AC133134.1-201ENST00000466800 359 ntBASIC4.12□□□□□ -1.75
PDLIM7Q9NR12 MTND1P19-201ENST00000511780 315 ntBASIC4.12□□□□□ -1.75
PDLIM7Q9NR12 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PDLIM7Q9NR12 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.12□□□□□ -1.75
PDLIM7Q9NR12 MED28P6-201ENST00000558776 231 ntBASIC4.12□□□□□ -1.75
PDLIM7Q9NR12 ZNF192P1-203ENST00000565888 810 ntBASIC4.12□□□□□ -1.75
PDLIM7Q9NR12 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.12□□□□□ -1.75
PDLIM7Q9NR12 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.12□□□□□ -1.75
PDLIM7Q9NR12 MIR3124-201ENST00000582636 67 ntBASIC4.12□□□□□ -1.75
PDLIM7Q9NR12 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.12□□□□□ -1.75
PDLIM7Q9NR12 MIR4727-201ENST00000622232 55 ntBASIC4.12□□□□□ -1.75
PDLIM7Q9NR12 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.12□□□□□ -1.75
PDLIM7Q9NR12 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.12□□□□□ -1.75
PDLIM7Q9NR12 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
PDLIM7Q9NR12 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
PDLIM7Q9NR12 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
PDLIM7Q9NR12 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PDLIM7Q9NR12 NCAPGP1-201ENST00000505112 1814 ntBASIC4.11□□□□□ -1.75
PDLIM7Q9NR12 LINC02471-203ENST00000641941 4752 ntBASIC4.11□□□□□ -1.75
PDLIM7Q9NR12 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.11□□□□□ -1.75
PDLIM7Q9NR12 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.11□□□□□ -1.75
PDLIM7Q9NR12 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PDLIM7Q9NR12 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.11□□□□□ -1.75
PDLIM7Q9NR12 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
PDLIM7Q9NR12 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PDLIM7Q9NR12 Y_RNA.60-201ENST00000362831 98 ntBASIC4.11□□□□□ -1.75
PDLIM7Q9NR12 RNU6-770P-201ENST00000363929 105 ntBASIC4.11□□□□□ -1.75
PDLIM7Q9NR12 SNORA38.1-201ENST00000364172 131 ntBASIC4.11□□□□□ -1.75
PDLIM7Q9NR12 RNU4-50P-201ENST00000364361 141 ntBASIC4.11□□□□□ -1.75
PDLIM7Q9NR12 Y_RNA.477-201ENST00000384352 108 ntBASIC4.11□□□□□ -1.75
PDLIM7Q9NR12 RNU4-70P-201ENST00000384579 139 ntBASIC4.11□□□□□ -1.75
PDLIM7Q9NR12 MIR521-1-201ENST00000384902 87 ntBASIC4.11□□□□□ -1.75
PDLIM7Q9NR12 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
PDLIM7Q9NR12 RNA5SP39-201ENST00000411245 120 ntBASIC4.11□□□□□ -1.75
PDLIM7Q9NR12 AL592148.1-201ENST00000413568 445 ntBASIC4.11□□□□□ -1.75
PDLIM7Q9NR12 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.11□□□□□ -1.75
PDLIM7Q9NR12 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.11□□□□□ -1.75
PDLIM7Q9NR12 SUMO1P3-201ENST00000439961 304 ntBASIC4.11□□□□□ -1.75
PDLIM7Q9NR12 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.11□□□□□ -1.75
PDLIM7Q9NR12 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.11□□□□□ -1.75
PDLIM7Q9NR12 RNU6-897P-201ENST00000517135 105 ntBASIC4.11□□□□□ -1.75
PDLIM7Q9NR12 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.11□□□□□ -1.75
PDLIM7Q9NR12 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.11□□□□□ -1.75
PDLIM7Q9NR12 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC4.11□□□□□ -1.75
PDLIM7Q9NR12 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.11□□□□□ -1.75
PDLIM7Q9NR12 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC4.11□□□□□ -1.75
PDLIM7Q9NR12 AC012493.2-201ENST00000595083 291 ntBASIC4.11□□□□□ -1.75
PDLIM7Q9NR12 uc_338.32-201ENST00000615087 172 ntBASIC4.11□□□□□ -1.75
PDLIM7Q9NR12 AL159153.1-201ENST00000619688 317 ntBASIC4.11□□□□□ -1.75
PDLIM7Q9NR12 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
PDLIM7Q9NR12 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.11□□□□□ -1.75
PDLIM7Q9NR12 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PDLIM7Q9NR12 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PDLIM7Q9NR12 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.11□□□□□ -1.75
PDLIM7Q9NR12 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
PDLIM7Q9NR12 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.1□□□□□ -1.75
PDLIM7Q9NR12 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
PDLIM7Q9NR12 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
PDLIM7Q9NR12 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PDLIM7Q9NR12 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
PDLIM7Q9NR12 ZNF299P-201ENST00000406845 1804 ntBASIC4.1□□□□□ -1.75
PDLIM7Q9NR12 Y_RNA.14-201ENST00000362415 103 ntBASIC4.1□□□□□ -1.75
PDLIM7Q9NR12 MIR3074-201ENST00000384885 81 ntBASIC4.1□□□□□ -1.75
PDLIM7Q9NR12 MIR548I3-201ENST00000408378 149 ntBASIC4.1□□□□□ -1.75
PDLIM7Q9NR12 MIR548I1-201ENST00000408810 149 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms