Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 MTCO3P41-201ENST00000414801 328 ntBASIC2.38□□□□□ -2.03
VIPAS39Q9H9C1 AL606489.2-201ENST00000433886 234 ntBASIC2.38□□□□□ -2.03
VIPAS39Q9H9C1 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.38□□□□□ -2.03
VIPAS39Q9H9C1 FABP5P14-201ENST00000437273 393 ntBASIC2.38□□□□□ -2.03
VIPAS39Q9H9C1 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.38□□□□□ -2.03
VIPAS39Q9H9C1 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.38□□□□□ -2.03
VIPAS39Q9H9C1 MTCO2P7-201ENST00000446518 666 ntBASIC2.38□□□□□ -2.03
VIPAS39Q9H9C1 RNU6-717P-201ENST00000459076 104 ntBASIC2.38□□□□□ -2.03
VIPAS39Q9H9C1 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.38□□□□□ -2.03
VIPAS39Q9H9C1 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.38□□□□□ -2.03
VIPAS39Q9H9C1 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.38□□□□□ -2.03
VIPAS39Q9H9C1 Y_RNA.687-201ENST00000516558 91 ntBASIC2.38□□□□□ -2.03
VIPAS39Q9H9C1 RN7SKP219-201ENST00000516825 296 ntBASIC2.38□□□□□ -2.03
VIPAS39Q9H9C1 RNU1-104P-201ENST00000517280 175 ntBASIC2.38□□□□□ -2.03
VIPAS39Q9H9C1 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.38□□□□□ -2.03
VIPAS39Q9H9C1 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.38□□□□□ -2.03
VIPAS39Q9H9C1 AP005435.4-201ENST00000529514 284 ntBASIC2.38□□□□□ -2.03
VIPAS39Q9H9C1 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.38□□□□□ -2.03
VIPAS39Q9H9C1 AC245505.1-201ENST00000556398 224 ntBASIC2.38□□□□□ -2.03
VIPAS39Q9H9C1 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.38□□□□□ -2.03
VIPAS39Q9H9C1 AC234778.2-201ENST00000566241 354 ntBASIC2.38□□□□□ -2.03
VIPAS39Q9H9C1 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.38□□□□□ -2.03
VIPAS39Q9H9C1 MIR5583-1-201ENST00000580941 59 ntBASIC2.38□□□□□ -2.03
VIPAS39Q9H9C1 MIR3199-1-201ENST00000582434 88 ntBASIC2.38□□□□□ -2.03
VIPAS39Q9H9C1 MIR4765-201ENST00000585007 77 ntBASIC2.38□□□□□ -2.03
VIPAS39Q9H9C1 AC012507.3-201ENST00000603556 477 ntBASIC2.38□□□□□ -2.03
VIPAS39Q9H9C1 AC087045.1-201ENST00000605856 382 ntBASIC2.38□□□□□ -2.03
VIPAS39Q9H9C1 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.38□□□□□ -2.03
VIPAS39Q9H9C1 AP001486.3-201ENST00000615334 372 ntBASIC2.38□□□□□ -2.03
VIPAS39Q9H9C1 AC139792.3-201ENST00000623525 224 ntBASIC2.38□□□□□ -2.03
VIPAS39Q9H9C1 MIR1291-201ENST00000627649 87 ntBASIC2.38□□□□□ -2.03
VIPAS39Q9H9C1 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.38□□□□□ -2.03
VIPAS39Q9H9C1 AC080128.1-201ENST00000474389 1917 ntBASIC2.38□□□□□ -2.03
VIPAS39Q9H9C1 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
VIPAS39Q9H9C1 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
VIPAS39Q9H9C1 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.38□□□□□ -2.03
VIPAS39Q9H9C1 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.37□□□□□ -2.03
VIPAS39Q9H9C1 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.37□□□□□ -2.03
VIPAS39Q9H9C1 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
VIPAS39Q9H9C1 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
VIPAS39Q9H9C1 SNORA67.1-201ENST00000364749 141 ntBASIC2.37□□□□□ -2.03
VIPAS39Q9H9C1 SNORD70.1-201ENST00000391007 85 ntBASIC2.37□□□□□ -2.03
VIPAS39Q9H9C1 RNU6-1158P-201ENST00000391167 107 ntBASIC2.37□□□□□ -2.03
VIPAS39Q9H9C1 RNU6-903P-201ENST00000391270 109 ntBASIC2.37□□□□□ -2.03
VIPAS39Q9H9C1 AL669831.1-202ENST00000428504 417 ntBASIC2.37□□□□□ -2.03
VIPAS39Q9H9C1 RPL23AP83-201ENST00000434984 473 ntBASIC2.37□□□□□ -2.03
VIPAS39Q9H9C1 GTF2IP13-201ENST00000438487 386 ntBASIC2.37□□□□□ -2.03
VIPAS39Q9H9C1 CALM1P1-201ENST00000442082 433 ntBASIC2.37□□□□□ -2.03
VIPAS39Q9H9C1 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.37□□□□□ -2.03
VIPAS39Q9H9C1 MRPL42P6-201ENST00000486397 371 ntBASIC2.37□□□□□ -2.03
VIPAS39Q9H9C1 AC107401.1-201ENST00000503426 685 ntBASIC2.37□□□□□ -2.03
VIPAS39Q9H9C1 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.37□□□□□ -2.03
VIPAS39Q9H9C1 MIR892C-201ENST00000516410 77 ntBASIC2.37□□□□□ -2.03
VIPAS39Q9H9C1 SCARNA11.3-201ENST00000517276 130 ntBASIC2.37□□□□□ -2.03
VIPAS39Q9H9C1 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.37□□□□□ -2.03
VIPAS39Q9H9C1 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.37□□□□□ -2.03
VIPAS39Q9H9C1 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.37□□□□□ -2.03
VIPAS39Q9H9C1 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.37□□□□□ -2.03
VIPAS39Q9H9C1 AC068792.1-201ENST00000621354 417 ntBASIC2.37□□□□□ -2.03
VIPAS39Q9H9C1 MIR6766-201ENST00000622641 72 ntBASIC2.37□□□□□ -2.03
VIPAS39Q9H9C1 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
VIPAS39Q9H9C1 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.37□□□□□ -2.03
VIPAS39Q9H9C1 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
VIPAS39Q9H9C1 RNU6-552P-201ENST00000362869 119 ntBASIC2.36□□□□□ -2.03
VIPAS39Q9H9C1 RNU6-996P-201ENST00000365438 107 ntBASIC2.36□□□□□ -2.03
VIPAS39Q9H9C1 RNU6-1083P-201ENST00000384022 107 ntBASIC2.36□□□□□ -2.03
VIPAS39Q9H9C1 RNU4-52P-201ENST00000384209 138 ntBASIC2.36□□□□□ -2.03
VIPAS39Q9H9C1 RNU6-72P-201ENST00000384285 79 ntBASIC2.36□□□□□ -2.03
VIPAS39Q9H9C1 MIR34A-201ENST00000385130 110 ntBASIC2.36□□□□□ -2.03
VIPAS39Q9H9C1 AL359511.1-201ENST00000402970 211 ntBASIC2.36□□□□□ -2.03
VIPAS39Q9H9C1 RNA5SP338-201ENST00000410495 85 ntBASIC2.36□□□□□ -2.03
VIPAS39Q9H9C1 RNU4-46P-201ENST00000410818 138 ntBASIC2.36□□□□□ -2.03
VIPAS39Q9H9C1 AL353621.1-201ENST00000418219 243 ntBASIC2.36□□□□□ -2.03
VIPAS39Q9H9C1 HMGN2P38-201ENST00000423806 265 ntBASIC2.36□□□□□ -2.03
VIPAS39Q9H9C1 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.36□□□□□ -2.03
VIPAS39Q9H9C1 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.36□□□□□ -2.03
VIPAS39Q9H9C1 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.36□□□□□ -2.03
VIPAS39Q9H9C1 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.36□□□□□ -2.03
VIPAS39Q9H9C1 AL135938.1-201ENST00000443141 297 ntBASIC2.36□□□□□ -2.03
VIPAS39Q9H9C1 NDUFB1P2-201ENST00000449477 176 ntBASIC2.36□□□□□ -2.03
VIPAS39Q9H9C1 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.36□□□□□ -2.03
VIPAS39Q9H9C1 SCARNA18-201ENST00000459004 134 ntBASIC2.36□□□□□ -2.03
VIPAS39Q9H9C1 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.36□□□□□ -2.03
VIPAS39Q9H9C1 RPL9P6-201ENST00000492764 598 ntBASIC2.36□□□□□ -2.03
VIPAS39Q9H9C1 RPL23AP49-201ENST00000492925 468 ntBASIC2.36□□□□□ -2.03
VIPAS39Q9H9C1 AC105417.1-201ENST00000514691 285 ntBASIC2.36□□□□□ -2.03
VIPAS39Q9H9C1 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.36□□□□□ -2.03
VIPAS39Q9H9C1 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.36□□□□□ -2.03
VIPAS39Q9H9C1 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.36□□□□□ -2.03
VIPAS39Q9H9C1 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.36□□□□□ -2.03
VIPAS39Q9H9C1 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.36□□□□□ -2.03
VIPAS39Q9H9C1 AC008121.1-201ENST00000603244 268 ntBASIC2.36□□□□□ -2.03
VIPAS39Q9H9C1 ATP5A1P2-202ENST00000616464 443 ntBASIC2.36□□□□□ -2.03
VIPAS39Q9H9C1 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.36□□□□□ -2.03
VIPAS39Q9H9C1 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.36□□□□□ -2.03
VIPAS39Q9H9C1 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
VIPAS39Q9H9C1 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.35□□□□□ -2.03
VIPAS39Q9H9C1 RNA5SP138-201ENST00000365098 114 ntBASIC2.35□□□□□ -2.03
VIPAS39Q9H9C1 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.35□□□□□ -2.03
VIPAS39Q9H9C1 RNU2-3P-201ENST00000410144 191 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms