Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CDT1Q9H211 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.13□□□□□ -1.91
CDT1Q9H211 RNU6-371P-201ENST00000364283 108 ntBASIC3.13□□□□□ -1.91
CDT1Q9H211 Y_RNA.326-201ENST00000365176 113 ntBASIC3.13□□□□□ -1.91
CDT1Q9H211 RNU6-140P-201ENST00000384566 108 ntBASIC3.13□□□□□ -1.91
CDT1Q9H211 RPS4XP3-201ENST00000398541 413 ntBASIC3.13□□□□□ -1.91
CDT1Q9H211 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.13□□□□□ -1.91
CDT1Q9H211 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.13□□□□□ -1.91
CDT1Q9H211 TRIAP1P1-201ENST00000427062 225 ntBASIC3.13□□□□□ -1.91
CDT1Q9H211 AL669831.1-202ENST00000428504 417 ntBASIC3.13□□□□□ -1.91
CDT1Q9H211 AC005534.2-201ENST00000431047 433 ntBASIC3.13□□□□□ -1.91
CDT1Q9H211 GTF2IP13-201ENST00000438487 386 ntBASIC3.13□□□□□ -1.91
CDT1Q9H211 NIPA2P5-201ENST00000452282 464 ntBASIC3.13□□□□□ -1.91
CDT1Q9H211 RPL21P41-201ENST00000459863 264 ntBASIC3.13□□□□□ -1.91
CDT1Q9H211 TRBV1-201ENST00000476502 284 ntBASIC3.13□□□□□ -1.91
CDT1Q9H211 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.13□□□□□ -1.91
CDT1Q9H211 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.13□□□□□ -1.91
CDT1Q9H211 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.13□□□□□ -1.91
CDT1Q9H211 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.13□□□□□ -1.91
CDT1Q9H211 SNORA19.2-201ENST00000516013 114 ntBASIC3.13□□□□□ -1.91
CDT1Q9H211 RN7SKP43-201ENST00000516173 320 ntBASIC3.13□□□□□ -1.91
CDT1Q9H211 Y_RNA.682-201ENST00000516457 100 ntBASIC3.13□□□□□ -1.91
CDT1Q9H211 RNU6-1282P-201ENST00000516735 96 ntBASIC3.13□□□□□ -1.91
CDT1Q9H211 RNU6-1315P-201ENST00000517187 99 ntBASIC3.13□□□□□ -1.91
CDT1Q9H211 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.13□□□□□ -1.91
CDT1Q9H211 OR11H5P-201ENST00000554039 926 ntBASIC3.13□□□□□ -1.91
CDT1Q9H211 AC004805.2-201ENST00000605382 482 ntBASIC3.13□□□□□ -1.91
CDT1Q9H211 AL627309.6-201ENST00000606857 840 ntBASIC3.13□□□□□ -1.91
CDT1Q9H211 MIR7106-201ENST00000612419 65 ntBASIC3.13□□□□□ -1.91
CDT1Q9H211 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.13□□□□□ -1.91
CDT1Q9H211 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CDT1Q9H211 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CDT1Q9H211 Y_RNA.100-201ENST00000363141 102 ntBASIC3.12□□□□□ -1.91
CDT1Q9H211 Y_RNA.414-201ENST00000384011 101 ntBASIC3.12□□□□□ -1.91
CDT1Q9H211 RNU6-393P-201ENST00000384475 107 ntBASIC3.12□□□□□ -1.91
CDT1Q9H211 SNORD116-29-201ENST00000384516 83 ntBASIC3.12□□□□□ -1.91
CDT1Q9H211 MIR578-201ENST00000384828 96 ntBASIC3.12□□□□□ -1.91
CDT1Q9H211 MIR301A-201ENST00000385261 86 ntBASIC3.12□□□□□ -1.91
CDT1Q9H211 SNORA16.2-201ENST00000390991 127 ntBASIC3.12□□□□□ -1.91
CDT1Q9H211 RPL21P3-201ENST00000395517 478 ntBASIC3.12□□□□□ -1.91
CDT1Q9H211 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.12□□□□□ -1.91
CDT1Q9H211 RPL21P90-201ENST00000415692 466 ntBASIC3.12□□□□□ -1.91
CDT1Q9H211 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.12□□□□□ -1.91
CDT1Q9H211 MTCO2P12-201ENST00000427426 682 ntBASIC3.12□□□□□ -1.91
CDT1Q9H211 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.12□□□□□ -1.91
CDT1Q9H211 HMGB3P8-201ENST00000449709 577 ntBASIC3.12□□□□□ -1.91
CDT1Q9H211 AC146507.2-201ENST00000460608 476 ntBASIC3.12□□□□□ -1.91
CDT1Q9H211 AC104472.2-201ENST00000469035 601 ntBASIC3.12□□□□□ -1.91
CDT1Q9H211 RPL30P14-201ENST00000482744 348 ntBASIC3.12□□□□□ -1.91
CDT1Q9H211 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.12□□□□□ -1.91
CDT1Q9H211 AC139453.3-201ENST00000493276 369 ntBASIC3.12□□□□□ -1.91
CDT1Q9H211 TBCAP3-201ENST00000512475 312 ntBASIC3.12□□□□□ -1.91
CDT1Q9H211 AC091826.1-201ENST00000514065 313 ntBASIC3.12□□□□□ -1.91
CDT1Q9H211 RNU6-928P-201ENST00000516876 104 ntBASIC3.12□□□□□ -1.91
CDT1Q9H211 RNA5SP165-201ENST00000517142 115 ntBASIC3.12□□□□□ -1.91
CDT1Q9H211 AP003122.3-201ENST00000526316 255 ntBASIC3.12□□□□□ -1.91
CDT1Q9H211 AC084851.1-201ENST00000529105 249 ntBASIC3.12□□□□□ -1.91
CDT1Q9H211 AP003072.1-201ENST00000531740 145 ntBASIC3.12□□□□□ -1.91
CDT1Q9H211 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.12□□□□□ -1.91
CDT1Q9H211 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.12□□□□□ -1.91
CDT1Q9H211 FRG2DP-202ENST00000566967 323 ntBASIC3.12□□□□□ -1.91
CDT1Q9H211 AC005668.1-201ENST00000571142 476 ntBASIC3.12□□□□□ -1.91
CDT1Q9H211 MIR1273C-201ENST00000578669 77 ntBASIC3.12□□□□□ -1.91
CDT1Q9H211 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.12□□□□□ -1.91
CDT1Q9H211 AC116312.1-201ENST00000606841 314 ntBASIC3.12□□□□□ -1.91
CDT1Q9H211 AC126177.8-201ENST00000618339 1015 ntBASIC3.12□□□□□ -1.91
CDT1Q9H211 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.12□□□□□ -1.91
CDT1Q9H211 AP003122.5-201ENST00000527668 3766 ntBASIC3.12□□□□□ -1.91
CDT1Q9H211 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CDT1Q9H211 FTLP6-201ENST00000355274 422 ntBASIC3.11□□□□□ -1.91
CDT1Q9H211 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CDT1Q9H211 Y_RNA.216-201ENST00000364205 93 ntBASIC3.11□□□□□ -1.91
CDT1Q9H211 RNU6-474P-201ENST00000384243 107 ntBASIC3.11□□□□□ -1.91
CDT1Q9H211 Y_RNA.510-201ENST00000384511 114 ntBASIC3.11□□□□□ -1.91
CDT1Q9H211 Y_RNA.579-201ENST00000390939 94 ntBASIC3.11□□□□□ -1.91
CDT1Q9H211 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
CDT1Q9H211 AL592114.1-201ENST00000403842 483 ntBASIC3.11□□□□□ -1.91
CDT1Q9H211 RN7SKP58-201ENST00000411010 305 ntBASIC3.11□□□□□ -1.91
CDT1Q9H211 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.11□□□□□ -1.91
CDT1Q9H211 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.11□□□□□ -1.91
CDT1Q9H211 RPS15AP6-201ENST00000420703 385 ntBASIC3.11□□□□□ -1.91
CDT1Q9H211 SNRPEP9-201ENST00000436794 238 ntBASIC3.11□□□□□ -1.91
CDT1Q9H211 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.11□□□□□ -1.91
CDT1Q9H211 RPL12P25-201ENST00000455592 494 ntBASIC3.11□□□□□ -1.91
CDT1Q9H211 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.11□□□□□ -1.91
CDT1Q9H211 SNORD19B-201ENST00000459623 84 ntBASIC3.11□□□□□ -1.91
CDT1Q9H211 TRBVA-201ENST00000498804 316 ntBASIC3.11□□□□□ -1.91
CDT1Q9H211 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
CDT1Q9H211 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.11□□□□□ -1.91
CDT1Q9H211 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.11□□□□□ -1.91
CDT1Q9H211 AC093331.1-201ENST00000521474 169 ntBASIC3.11□□□□□ -1.91
CDT1Q9H211 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.11□□□□□ -1.91
CDT1Q9H211 AL157871.3-201ENST00000557231 293 ntBASIC3.11□□□□□ -1.91
CDT1Q9H211 AC020661.2-201ENST00000560114 134 ntBASIC3.11□□□□□ -1.91
CDT1Q9H211 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.11□□□□□ -1.91
CDT1Q9H211 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.11□□□□□ -1.91
CDT1Q9H211 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CDT1Q9H211 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.11□□□□□ -1.91
CDT1Q9H211 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.11□□□□□ -1.91
CDT1Q9H211 AC093831.2-201ENST00000624393 3427 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms