Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 TRAV37-201ENST00000553906 342 ntBASIC4.01□□□□□ -1.77
RNF38Q9H0F5 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.01□□□□□ -1.77
RNF38Q9H0F5 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.01□□□□□ -1.77
RNF38Q9H0F5 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.01□□□□□ -1.77
RNF38Q9H0F5 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.01□□□□□ -1.77
RNF38Q9H0F5 U2.22-201ENST00000636441 106 ntBASIC4.01□□□□□ -1.77
RNF38Q9H0F5 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RNF38Q9H0F5 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
RNF38Q9H0F5 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
RNF38Q9H0F5 AC090740.1-201ENST00000623193 2262 ntBASIC4.01□□□□□ -1.77
RNF38Q9H0F5 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RNF38Q9H0F5 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RNF38Q9H0F5 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RNF38Q9H0F5 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
RNF38Q9H0F5 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
RNF38Q9H0F5 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
RNF38Q9H0F5 RNA5SP322-201ENST00000363617 119 ntBASIC4□□□□□ -1.77
RNF38Q9H0F5 RNU6-827P-201ENST00000365553 106 ntBASIC4□□□□□ -1.77
RNF38Q9H0F5 RNU6-338P-201ENST00000383888 105 ntBASIC4□□□□□ -1.77
RNF38Q9H0F5 RNU6-741P-201ENST00000383889 107 ntBASIC4□□□□□ -1.77
RNF38Q9H0F5 Y_RNA.478-201ENST00000384358 107 ntBASIC4□□□□□ -1.77
RNF38Q9H0F5 MIR199A2-201ENST00000385289 110 ntBASIC4□□□□□ -1.77
RNF38Q9H0F5 Y_RNA.592-201ENST00000410274 109 ntBASIC4□□□□□ -1.77
RNF38Q9H0F5 RNU6-1025P-201ENST00000410629 104 ntBASIC4□□□□□ -1.77
RNF38Q9H0F5 RNA5SP306-201ENST00000411087 107 ntBASIC4□□□□□ -1.77
RNF38Q9H0F5 AL591419.1-201ENST00000427423 339 ntBASIC4□□□□□ -1.77
RNF38Q9H0F5 AC087650.1-201ENST00000431445 468 ntBASIC4□□□□□ -1.77
RNF38Q9H0F5 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4□□□□□ -1.77
RNF38Q9H0F5 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4□□□□□ -1.77
RNF38Q9H0F5 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4□□□□□ -1.77
RNF38Q9H0F5 PRELID3BP1-201ENST00000457142 540 ntBASIC4□□□□□ -1.77
RNF38Q9H0F5 RNU6-1037P-201ENST00000459571 107 ntBASIC4□□□□□ -1.77
RNF38Q9H0F5 AC091153.1-201ENST00000466297 402 ntBASIC4□□□□□ -1.77
RNF38Q9H0F5 RPL31P61-201ENST00000496160 376 ntBASIC4□□□□□ -1.77
RNF38Q9H0F5 RNU1-95P-201ENST00000516357 160 ntBASIC4□□□□□ -1.77
RNF38Q9H0F5 RNU1-128P-201ENST00000516704 160 ntBASIC4□□□□□ -1.77
RNF38Q9H0F5 GNRHR2P1-201ENST00000555315 631 ntBASIC4□□□□□ -1.77
RNF38Q9H0F5 AL137100.2-201ENST00000555786 315 ntBASIC4□□□□□ -1.77
RNF38Q9H0F5 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4□□□□□ -1.77
RNF38Q9H0F5 MIR5701-3-201ENST00000578890 82 ntBASIC4□□□□□ -1.77
RNF38Q9H0F5 MIR4644-201ENST00000579929 84 ntBASIC4□□□□□ -1.77
RNF38Q9H0F5 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4□□□□□ -1.77
RNF38Q9H0F5 MIR5701-1-201ENST00000585138 82 ntBASIC4□□□□□ -1.77
RNF38Q9H0F5 AC098826.3-201ENST00000603823 466 ntBASIC4□□□□□ -1.77
RNF38Q9H0F5 MIR5701-2-201ENST00000615634 82 ntBASIC4□□□□□ -1.77
RNF38Q9H0F5 RMST_4.1-201ENST00000616886 107 ntBASIC4□□□□□ -1.77
RNF38Q9H0F5 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4□□□□□ -1.77
RNF38Q9H0F5 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4□□□□□ -1.77
RNF38Q9H0F5 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RNF38Q9H0F5 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4□□□□□ -1.77
RNF38Q9H0F5 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RNF38Q9H0F5 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
RNF38Q9H0F5 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
RNF38Q9H0F5 MTND5P9-201ENST00000503854 1755 ntBASIC3.99□□□□□ -1.77
RNF38Q9H0F5 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.99□□□□□ -1.77
RNF38Q9H0F5 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
RNF38Q9H0F5 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RNF38Q9H0F5 Y_RNA.33-201ENST00000362591 102 ntBASIC3.99□□□□□ -1.77
RNF38Q9H0F5 RNU6-1167P-201ENST00000363227 94 ntBASIC3.99□□□□□ -1.77
RNF38Q9H0F5 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
RNF38Q9H0F5 Y_RNA.416-201ENST00000384014 113 ntBASIC3.99□□□□□ -1.77
RNF38Q9H0F5 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
RNF38Q9H0F5 AL591034.1-201ENST00000407447 340 ntBASIC3.99□□□□□ -1.77
RNF38Q9H0F5 RNA5SP494-201ENST00000410653 129 ntBASIC3.99□□□□□ -1.77
RNF38Q9H0F5 RNU2-25P-201ENST00000411041 191 ntBASIC3.99□□□□□ -1.77
RNF38Q9H0F5 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.99□□□□□ -1.77
RNF38Q9H0F5 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.99□□□□□ -1.77
RNF38Q9H0F5 AL358232.1-201ENST00000448030 501 ntBASIC3.99□□□□□ -1.77
RNF38Q9H0F5 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.99□□□□□ -1.77
RNF38Q9H0F5 AL133162.1-201ENST00000463228 453 ntBASIC3.99□□□□□ -1.77
RNF38Q9H0F5 AC034236.1-201ENST00000469891 373 ntBASIC3.99□□□□□ -1.77
RNF38Q9H0F5 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.99□□□□□ -1.77
RNF38Q9H0F5 AL160314.1-201ENST00000490836 438 ntBASIC3.99□□□□□ -1.77
RNF38Q9H0F5 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.99□□□□□ -1.77
RNF38Q9H0F5 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.99□□□□□ -1.77
RNF38Q9H0F5 RNU6-182P-201ENST00000516970 105 ntBASIC3.99□□□□□ -1.77
RNF38Q9H0F5 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.99□□□□□ -1.77
RNF38Q9H0F5 AC007458.1-201ENST00000542812 373 ntBASIC3.99□□□□□ -1.77
RNF38Q9H0F5 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.99□□□□□ -1.77
RNF38Q9H0F5 MIR1273C-201ENST00000578669 77 ntBASIC3.99□□□□□ -1.77
RNF38Q9H0F5 AC244505.7-201ENST00000599675 272 ntBASIC3.99□□□□□ -1.77
RNF38Q9H0F5 AL591424.2-201ENST00000617023 128 ntBASIC3.99□□□□□ -1.77
RNF38Q9H0F5 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.99□□□□□ -1.77
RNF38Q9H0F5 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
RNF38Q9H0F5 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.99□□□□□ -1.77
RNF38Q9H0F5 AC007785.2-201ENST00000598627 1916 ntBASIC3.99□□□□□ -1.77
RNF38Q9H0F5 AF127577.6-201ENST00000623352 2191 ntBASIC3.99□□□□□ -1.77
RNF38Q9H0F5 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
RNF38Q9H0F5 AP001148.1-201ENST00000624124 2359 ntBASIC3.98□□□□□ -1.77
RNF38Q9H0F5 AP000560.1-201ENST00000624150 1937 ntBASIC3.98□□□□□ -1.77
RNF38Q9H0F5 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
RNF38Q9H0F5 MIR423-201ENST00000362201 94 ntBASIC3.98□□□□□ -1.77
RNF38Q9H0F5 Y_RNA.84-201ENST00000363011 104 ntBASIC3.98□□□□□ -1.77
RNF38Q9H0F5 Y_RNA.183-201ENST00000363882 113 ntBASIC3.98□□□□□ -1.77
RNF38Q9H0F5 RNU6-595P-201ENST00000363944 107 ntBASIC3.98□□□□□ -1.77
RNF38Q9H0F5 Y_RNA.462-201ENST00000384268 102 ntBASIC3.98□□□□□ -1.77
RNF38Q9H0F5 Y_RNA.518-201ENST00000384552 113 ntBASIC3.98□□□□□ -1.77
RNF38Q9H0F5 RNU1-89P-201ENST00000384592 164 ntBASIC3.98□□□□□ -1.77
RNF38Q9H0F5 MIR215-201ENST00000384858 110 ntBASIC3.98□□□□□ -1.77
RNF38Q9H0F5 MIR301A-201ENST00000385261 86 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms