Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.34□□□□□ -1.88
AMBRA1Q9C0C7 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
AMBRA1Q9C0C7 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.33□□□□□ -1.88
AMBRA1Q9C0C7 AL513302.2-201ENST00000562313 1842 ntBASIC3.33□□□□□ -1.88
AMBRA1Q9C0C7 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.33□□□□□ -1.88
AMBRA1Q9C0C7 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
AMBRA1Q9C0C7 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
AMBRA1Q9C0C7 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.33□□□□□ -1.88
AMBRA1Q9C0C7 Y_RNA.148-201ENST00000363557 117 ntBASIC3.33□□□□□ -1.88
AMBRA1Q9C0C7 RNU6-827P-201ENST00000365553 106 ntBASIC3.33□□□□□ -1.88
AMBRA1Q9C0C7 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
AMBRA1Q9C0C7 RNU6-933P-201ENST00000384424 107 ntBASIC3.33□□□□□ -1.88
AMBRA1Q9C0C7 U8.11-201ENST00000384699 133 ntBASIC3.33□□□□□ -1.88
AMBRA1Q9C0C7 U8.12-201ENST00000384701 133 ntBASIC3.33□□□□□ -1.88
AMBRA1Q9C0C7 PTMAP5-201ENST00000393073 333 ntBASIC3.33□□□□□ -1.88
AMBRA1Q9C0C7 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.33□□□□□ -1.88
AMBRA1Q9C0C7 RNU6-174P-201ENST00000410406 106 ntBASIC3.33□□□□□ -1.88
AMBRA1Q9C0C7 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.33□□□□□ -1.88
AMBRA1Q9C0C7 YPEL5P1-201ENST00000419731 367 ntBASIC3.33□□□□□ -1.88
AMBRA1Q9C0C7 AL160004.2-201ENST00000432935 350 ntBASIC3.33□□□□□ -1.88
AMBRA1Q9C0C7 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.33□□□□□ -1.88
AMBRA1Q9C0C7 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.33□□□□□ -1.88
AMBRA1Q9C0C7 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.33□□□□□ -1.88
AMBRA1Q9C0C7 U8.18-201ENST00000459285 133 ntBASIC3.33□□□□□ -1.88
AMBRA1Q9C0C7 snoU109.2-201ENST00000459316 135 ntBASIC3.33□□□□□ -1.88
AMBRA1Q9C0C7 RPS4XP22-201ENST00000480755 780 ntBASIC3.33□□□□□ -1.88
AMBRA1Q9C0C7 PTP4A1P4-201ENST00000512479 322 ntBASIC3.33□□□□□ -1.88
AMBRA1Q9C0C7 ACA59.1-201ENST00000515966 143 ntBASIC3.33□□□□□ -1.88
AMBRA1Q9C0C7 RNU6-120P-201ENST00000516077 103 ntBASIC3.33□□□□□ -1.88
AMBRA1Q9C0C7 RNU6-579P-201ENST00000516879 102 ntBASIC3.33□□□□□ -1.88
AMBRA1Q9C0C7 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.33□□□□□ -1.88
AMBRA1Q9C0C7 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
AMBRA1Q9C0C7 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.33□□□□□ -1.88
AMBRA1Q9C0C7 HMGB1P14-201ENST00000557424 591 ntBASIC3.33□□□□□ -1.88
AMBRA1Q9C0C7 AC109446.1-201ENST00000566172 220 ntBASIC3.33□□□□□ -1.88
AMBRA1Q9C0C7 MIR3186-201ENST00000577404 85 ntBASIC3.33□□□□□ -1.88
AMBRA1Q9C0C7 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.33□□□□□ -1.88
AMBRA1Q9C0C7 MIR3200-201ENST00000580767 85 ntBASIC3.33□□□□□ -1.88
AMBRA1Q9C0C7 AL110115.1-201ENST00000614396 364 ntBASIC3.33□□□□□ -1.88
AMBRA1Q9C0C7 AC092628.2-201ENST00000622492 339 ntBASIC3.33□□□□□ -1.88
AMBRA1Q9C0C7 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.33□□□□□ -1.88
AMBRA1Q9C0C7 MTND4P1-201ENST00000457501 1466 ntBASIC3.33□□□□□ -1.88
AMBRA1Q9C0C7 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.33□□□□□ -1.88
AMBRA1Q9C0C7 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
AMBRA1Q9C0C7 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
AMBRA1Q9C0C7 AC090740.1-201ENST00000623193 2262 ntBASIC3.32□□□□□ -1.88
AMBRA1Q9C0C7 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.32□□□□□ -1.88
AMBRA1Q9C0C7 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
AMBRA1Q9C0C7 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
AMBRA1Q9C0C7 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.32□□□□□ -1.88
AMBRA1Q9C0C7 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.32□□□□□ -1.88
AMBRA1Q9C0C7 RNU1-75P-201ENST00000347264 129 ntBASIC3.32□□□□□ -1.88
AMBRA1Q9C0C7 Y_RNA.158-201ENST00000363651 101 ntBASIC3.32□□□□□ -1.88
AMBRA1Q9C0C7 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.32□□□□□ -1.88
AMBRA1Q9C0C7 Y_RNA.428-201ENST00000384078 102 ntBASIC3.32□□□□□ -1.88
AMBRA1Q9C0C7 MRPL42P3-201ENST00000401492 326 ntBASIC3.32□□□□□ -1.88
AMBRA1Q9C0C7 AL513475.1-201ENST00000406602 315 ntBASIC3.32□□□□□ -1.88
AMBRA1Q9C0C7 U3.39-201ENST00000408569 239 ntBASIC3.32□□□□□ -1.88
AMBRA1Q9C0C7 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.32□□□□□ -1.88
AMBRA1Q9C0C7 AC243428.1-201ENST00000421099 264 ntBASIC3.32□□□□□ -1.88
AMBRA1Q9C0C7 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.32□□□□□ -1.88
AMBRA1Q9C0C7 AC091286.1-201ENST00000431233 461 ntBASIC3.32□□□□□ -1.88
AMBRA1Q9C0C7 RPS15AP10-201ENST00000432472 382 ntBASIC3.32□□□□□ -1.88
AMBRA1Q9C0C7 AC011816.1-201ENST00000441346 546 ntBASIC3.32□□□□□ -1.88
AMBRA1Q9C0C7 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.32□□□□□ -1.88
AMBRA1Q9C0C7 AC021205.2-201ENST00000480069 347 ntBASIC3.32□□□□□ -1.88
AMBRA1Q9C0C7 RPS4XP13-201ENST00000483219 789 ntBASIC3.32□□□□□ -1.88
AMBRA1Q9C0C7 AC074250.1-201ENST00000511117 192 ntBASIC3.32□□□□□ -1.88
AMBRA1Q9C0C7 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.32□□□□□ -1.88
AMBRA1Q9C0C7 RNU1-61P-201ENST00000516107 151 ntBASIC3.32□□□□□ -1.88
AMBRA1Q9C0C7 RNU6-1137P-201ENST00000517073 99 ntBASIC3.32□□□□□ -1.88
AMBRA1Q9C0C7 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
AMBRA1Q9C0C7 AC026333.2-201ENST00000542164 106 ntBASIC3.32□□□□□ -1.88
AMBRA1Q9C0C7 DNAJC8P1-201ENST00000554535 372 ntBASIC3.32□□□□□ -1.88
AMBRA1Q9C0C7 MIR4782-201ENST00000577987 79 ntBASIC3.32□□□□□ -1.88
AMBRA1Q9C0C7 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.32□□□□□ -1.88
AMBRA1Q9C0C7 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.32□□□□□ -1.88
AMBRA1Q9C0C7 AC006157.1-201ENST00000611750 366 ntBASIC3.32□□□□□ -1.88
AMBRA1Q9C0C7 AC007485.1-201ENST00000616755 206 ntBASIC3.32□□□□□ -1.88
AMBRA1Q9C0C7 AC008121.3-201ENST00000618726 433 ntBASIC3.32□□□□□ -1.88
AMBRA1Q9C0C7 AC091925.1-201ENST00000623204 462 ntBASIC3.32□□□□□ -1.88
AMBRA1Q9C0C7 AC027309.3-201ENST00000623419 351 ntBASIC3.32□□□□□ -1.88
AMBRA1Q9C0C7 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.32□□□□□ -1.88
AMBRA1Q9C0C7 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
AMBRA1Q9C0C7 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
AMBRA1Q9C0C7 AL672296.1-201ENST00000427780 2158 ntBASIC3.32□□□□□ -1.88
AMBRA1Q9C0C7 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
AMBRA1Q9C0C7 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
AMBRA1Q9C0C7 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.31□□□□□ -1.88
AMBRA1Q9C0C7 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.31□□□□□ -1.88
AMBRA1Q9C0C7 RNU6-1317P-201ENST00000364582 104 ntBASIC3.31□□□□□ -1.88
AMBRA1Q9C0C7 SNORA73.2-201ENST00000364946 201 ntBASIC3.31□□□□□ -1.88
AMBRA1Q9C0C7 SNORA5A-201ENST00000384111 134 ntBASIC3.31□□□□□ -1.88
AMBRA1Q9C0C7 RNY1P14-201ENST00000384426 108 ntBASIC3.31□□□□□ -1.88
AMBRA1Q9C0C7 AC096664.2-201ENST00000411843 406 ntBASIC3.31□□□□□ -1.88
AMBRA1Q9C0C7 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.31□□□□□ -1.88
AMBRA1Q9C0C7 AC113618.1-201ENST00000416747 285 ntBASIC3.31□□□□□ -1.88
AMBRA1Q9C0C7 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.31□□□□□ -1.88
AMBRA1Q9C0C7 TMEM167AP1-201ENST00000423409 219 ntBASIC3.31□□□□□ -1.88
AMBRA1Q9C0C7 BX276092.3-201ENST00000424182 230 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 166.3 ms