Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AL691482.1-201ENST00000453255 87 ntBASIC4.64□□□□□ -1.67
COL25A1Q9BXS0 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
COL25A1Q9BXS0 RNU1-95P-201ENST00000516357 160 ntBASIC4.64□□□□□ -1.67
COL25A1Q9BXS0 RNU6-1007P-201ENST00000516586 107 ntBASIC4.64□□□□□ -1.67
COL25A1Q9BXS0 RNU1-128P-201ENST00000516704 160 ntBASIC4.64□□□□□ -1.67
COL25A1Q9BXS0 snoU109.6-201ENST00000516831 118 ntBASIC4.64□□□□□ -1.67
COL25A1Q9BXS0 RNU2-60P-201ENST00000517290 128 ntBASIC4.64□□□□□ -1.67
COL25A1Q9BXS0 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.64□□□□□ -1.67
COL25A1Q9BXS0 Y_RNA.757-201ENST00000578934 114 ntBASIC4.64□□□□□ -1.67
COL25A1Q9BXS0 AC013791.1-201ENST00000616619 62 ntBASIC4.64□□□□□ -1.67
COL25A1Q9BXS0 uc_338.13-201ENST00000618243 179 ntBASIC4.64□□□□□ -1.67
COL25A1Q9BXS0 MIR7975-201ENST00000619350 68 ntBASIC4.64□□□□□ -1.67
COL25A1Q9BXS0 AC091932.3-201ENST00000624223 323 ntBASIC4.64□□□□□ -1.67
COL25A1Q9BXS0 AC241585.2-209ENST00000638217 143 ntBASIC4.64□□□□□ -1.67
COL25A1Q9BXS0 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.64□□□□□ -1.67
COL25A1Q9BXS0 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC4.64□□□□□ -1.67
COL25A1Q9BXS0 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
COL25A1Q9BXS0 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
COL25A1Q9BXS0 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
COL25A1Q9BXS0 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
COL25A1Q9BXS0 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.64□□□□□ -1.67
COL25A1Q9BXS0 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL25A1Q9BXS0 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
COL25A1Q9BXS0 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
COL25A1Q9BXS0 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
COL25A1Q9BXS0 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
COL25A1Q9BXS0 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
COL25A1Q9BXS0 RNU6-801P-201ENST00000364087 105 ntBASIC4.63□□□□□ -1.67
COL25A1Q9BXS0 RNU6-1164P-201ENST00000364428 107 ntBASIC4.63□□□□□ -1.67
COL25A1Q9BXS0 Y_RNA.280-201ENST00000364765 112 ntBASIC4.63□□□□□ -1.67
COL25A1Q9BXS0 AC138623.1-201ENST00000418060 216 ntBASIC4.63□□□□□ -1.67
COL25A1Q9BXS0 FABP5P15-201ENST00000453566 214 ntBASIC4.63□□□□□ -1.67
COL25A1Q9BXS0 BX510359.1-201ENST00000456973 237 ntBASIC4.63□□□□□ -1.67
COL25A1Q9BXS0 RNU6-625P-201ENST00000459412 107 ntBASIC4.63□□□□□ -1.67
COL25A1Q9BXS0 RN7SL558P-201ENST00000497468 299 ntBASIC4.63□□□□□ -1.67
COL25A1Q9BXS0 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.63□□□□□ -1.67
COL25A1Q9BXS0 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.63□□□□□ -1.67
COL25A1Q9BXS0 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.63□□□□□ -1.67
COL25A1Q9BXS0 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC4.63□□□□□ -1.67
COL25A1Q9BXS0 AL139124.1-201ENST00000609123 421 ntBASIC4.63□□□□□ -1.67
COL25A1Q9BXS0 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC4.63□□□□□ -1.67
COL25A1Q9BXS0 AC138965.3-201ENST00000623875 498 ntBASIC4.63□□□□□ -1.67
COL25A1Q9BXS0 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
COL25A1Q9BXS0 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
COL25A1Q9BXS0 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
COL25A1Q9BXS0 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
COL25A1Q9BXS0 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC4.63□□□□□ -1.67
COL25A1Q9BXS0 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
COL25A1Q9BXS0 AC016588.2-201ENST00000632484 3021 ntBASIC4.62□□□□□ -1.67
COL25A1Q9BXS0 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.62□□□□□ -1.67
COL25A1Q9BXS0 SNORD115-8-201ENST00000363856 82 ntBASIC4.62□□□□□ -1.67
COL25A1Q9BXS0 SNORD115-38-201ENST00000365037 82 ntBASIC4.62□□□□□ -1.67
COL25A1Q9BXS0 Y_RNA.393-201ENST00000383936 102 ntBASIC4.62□□□□□ -1.67
COL25A1Q9BXS0 MIR15B-201ENST00000385045 98 ntBASIC4.62□□□□□ -1.67
COL25A1Q9BXS0 MIR548A3-201ENST00000385297 97 ntBASIC4.62□□□□□ -1.67
COL25A1Q9BXS0 RNU6-882P-201ENST00000391025 103 ntBASIC4.62□□□□□ -1.67
COL25A1Q9BXS0 SNORA40C-201ENST00000391285 128 ntBASIC4.62□□□□□ -1.67
COL25A1Q9BXS0 AL139095.1-201ENST00000404326 391 ntBASIC4.62□□□□□ -1.67
COL25A1Q9BXS0 RNU2-54P-201ENST00000410299 190 ntBASIC4.62□□□□□ -1.67
COL25A1Q9BXS0 RPL21P66-201ENST00000426566 466 ntBASIC4.62□□□□□ -1.67
COL25A1Q9BXS0 BX276092.6-201ENST00000430476 250 ntBASIC4.62□□□□□ -1.67
COL25A1Q9BXS0 BX276092.8-201ENST00000455722 250 ntBASIC4.62□□□□□ -1.67
COL25A1Q9BXS0 AC091874.1-201ENST00000511402 339 ntBASIC4.62□□□□□ -1.67
COL25A1Q9BXS0 AC018448.1-201ENST00000552843 316 ntBASIC4.62□□□□□ -1.67
COL25A1Q9BXS0 SNORA74C-1-201ENST00000580726 201 ntBASIC4.62□□□□□ -1.67
COL25A1Q9BXS0 uc_338.28-201ENST00000612082 187 ntBASIC4.62□□□□□ -1.67
COL25A1Q9BXS0 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
COL25A1Q9BXS0 UGP2-230ENST00000626380 276 ntTSL 5 BASIC4.62□□□□□ -1.67
COL25A1Q9BXS0 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL25A1Q9BXS0 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
COL25A1Q9BXS0 AC063976.2-201ENST00000425667 3556 ntBASIC4.62□□□□□ -1.67
COL25A1Q9BXS0 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
COL25A1Q9BXS0 AC068647.1-201ENST00000489539 2265 ntBASIC4.62□□□□□ -1.67
COL25A1Q9BXS0 AL596211.1-201ENST00000569873 2277 ntBASIC4.62□□□□□ -1.67
COL25A1Q9BXS0 AC018529.3-201ENST00000624212 2254 ntBASIC4.62□□□□□ -1.67
COL25A1Q9BXS0 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
COL25A1Q9BXS0 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
COL25A1Q9BXS0 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
COL25A1Q9BXS0 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
COL25A1Q9BXS0 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
COL25A1Q9BXS0 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
COL25A1Q9BXS0 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
COL25A1Q9BXS0 SAGE2P-201ENST00000420011 2126 ntBASIC4.61□□□□□ -1.67
COL25A1Q9BXS0 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
COL25A1Q9BXS0 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.61□□□□□ -1.67
COL25A1Q9BXS0 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
COL25A1Q9BXS0 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
COL25A1Q9BXS0 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.61□□□□□ -1.67
COL25A1Q9BXS0 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.61□□□□□ -1.67
COL25A1Q9BXS0 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.61□□□□□ -1.67
COL25A1Q9BXS0 SNORA5A-201ENST00000384111 134 ntBASIC4.61□□□□□ -1.67
COL25A1Q9BXS0 RNU6-166P-201ENST00000384371 107 ntBASIC4.61□□□□□ -1.67
COL25A1Q9BXS0 RNA5SP187-201ENST00000384400 119 ntBASIC4.61□□□□□ -1.67
COL25A1Q9BXS0 Y_RNA.558-201ENST00000384685 113 ntBASIC4.61□□□□□ -1.67
COL25A1Q9BXS0 SNORA26.5-201ENST00000391215 123 ntBASIC4.61□□□□□ -1.67
COL25A1Q9BXS0 SDHCP2-201ENST00000398565 501 ntBASIC4.61□□□□□ -1.67
COL25A1Q9BXS0 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.61□□□□□ -1.67
COL25A1Q9BXS0 AL714022.1-201ENST00000439897 151 ntBASIC4.61□□□□□ -1.67
COL25A1Q9BXS0 AC083899.1-201ENST00000454465 3819 ntBASIC4.61□□□□□ -1.67
COL25A1Q9BXS0 RNU6-1198P-201ENST00000516904 67 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 178.3 ms