Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.79□□□□□ -1.8
CDK5RAP1Q96SZ6 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.79□□□□□ -1.8
CDK5RAP1Q96SZ6 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.79□□□□□ -1.8
CDK5RAP1Q96SZ6 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.79□□□□□ -1.8
CDK5RAP1Q96SZ6 RPL21P41-201ENST00000459863 264 ntBASIC3.79□□□□□ -1.8
CDK5RAP1Q96SZ6 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.79□□□□□ -1.8
CDK5RAP1Q96SZ6 AC110768.1-201ENST00000509222 400 ntBASIC3.79□□□□□ -1.8
CDK5RAP1Q96SZ6 HIGD1AP3-201ENST00000515857 278 ntBASIC3.79□□□□□ -1.8
CDK5RAP1Q96SZ6 RNU5B-3P-201ENST00000516601 115 ntBASIC3.79□□□□□ -1.8
CDK5RAP1Q96SZ6 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.79□□□□□ -1.8
CDK5RAP1Q96SZ6 AC007458.1-201ENST00000542812 373 ntBASIC3.79□□□□□ -1.8
CDK5RAP1Q96SZ6 AC004584.2-201ENST00000570407 410 ntBASIC3.79□□□□□ -1.8
CDK5RAP1Q96SZ6 MIR4643-201ENST00000577473 78 ntBASIC3.79□□□□□ -1.8
CDK5RAP1Q96SZ6 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.79□□□□□ -1.8
CDK5RAP1Q96SZ6 MIR15A-201ENST00000607334 83 ntBASIC3.79□□□□□ -1.8
CDK5RAP1Q96SZ6 AC006023.2-201ENST00000609916 167 ntBASIC3.79□□□□□ -1.8
CDK5RAP1Q96SZ6 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.79□□□□□ -1.8
CDK5RAP1Q96SZ6 AL138825.1-201ENST00000618587 192 ntBASIC3.79□□□□□ -1.8
CDK5RAP1Q96SZ6 SNORD39.4-201ENST00000620099 78 ntBASIC3.79□□□□□ -1.8
CDK5RAP1Q96SZ6 AC112200.1-201ENST00000625015 234 ntBASIC3.79□□□□□ -1.8
CDK5RAP1Q96SZ6 U6.104-201ENST00000637979 90 ntBASIC3.79□□□□□ -1.8
CDK5RAP1Q96SZ6 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.79□□□□□ -1.8
CDK5RAP1Q96SZ6 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CDK5RAP1Q96SZ6 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDK5RAP1Q96SZ6 AP000560.1-201ENST00000624150 1937 ntBASIC3.79□□□□□ -1.8
CDK5RAP1Q96SZ6 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDK5RAP1Q96SZ6 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CDK5RAP1Q96SZ6 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.78□□□□□ -1.8
CDK5RAP1Q96SZ6 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CDK5RAP1Q96SZ6 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDK5RAP1Q96SZ6 SNORA7.2-201ENST00000364446 145 ntBASIC3.78□□□□□ -1.8
CDK5RAP1Q96SZ6 MIR135A2-201ENST00000384854 100 ntBASIC3.78□□□□□ -1.8
CDK5RAP1Q96SZ6 MIR7-3-201ENST00000384898 110 ntBASIC3.78□□□□□ -1.8
CDK5RAP1Q96SZ6 MIR218-2-201ENST00000385006 110 ntBASIC3.78□□□□□ -1.8
CDK5RAP1Q96SZ6 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDK5RAP1Q96SZ6 HSPE1P8-201ENST00000406997 288 ntBASIC3.78□□□□□ -1.8
CDK5RAP1Q96SZ6 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.78□□□□□ -1.8
CDK5RAP1Q96SZ6 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.78□□□□□ -1.8
CDK5RAP1Q96SZ6 SSXP9-201ENST00000417503 292 ntBASIC3.78□□□□□ -1.8
CDK5RAP1Q96SZ6 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.78□□□□□ -1.8
CDK5RAP1Q96SZ6 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.78□□□□□ -1.8
CDK5RAP1Q96SZ6 AC004383.1-201ENST00000438135 289 ntBASIC3.78□□□□□ -1.8
CDK5RAP1Q96SZ6 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.78□□□□□ -1.8
CDK5RAP1Q96SZ6 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.78□□□□□ -1.8
CDK5RAP1Q96SZ6 AL360271.2-201ENST00000447710 161 ntBASIC3.78□□□□□ -1.8
CDK5RAP1Q96SZ6 AC234775.1-201ENST00000454247 670 ntBASIC3.78□□□□□ -1.8
CDK5RAP1Q96SZ6 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.78□□□□□ -1.8
CDK5RAP1Q96SZ6 RNU6-579P-201ENST00000516879 102 ntBASIC3.78□□□□□ -1.8
CDK5RAP1Q96SZ6 HMGN1P28-201ENST00000521340 364 ntBASIC3.78□□□□□ -1.8
CDK5RAP1Q96SZ6 AC008011.1-201ENST00000545989 227 ntBASIC3.78□□□□□ -1.8
CDK5RAP1Q96SZ6 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.78□□□□□ -1.8
CDK5RAP1Q96SZ6 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.78□□□□□ -1.8
CDK5RAP1Q96SZ6 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.78□□□□□ -1.8
CDK5RAP1Q96SZ6 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.78□□□□□ -1.8
CDK5RAP1Q96SZ6 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDK5RAP1Q96SZ6 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
CDK5RAP1Q96SZ6 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.8
CDK5RAP1Q96SZ6 AC090740.1-201ENST00000623193 2262 ntBASIC3.78□□□□□ -1.8
CDK5RAP1Q96SZ6 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CDK5RAP1Q96SZ6 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.78□□□□□ -1.81
CDK5RAP1Q96SZ6 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
CDK5RAP1Q96SZ6 CEP170P1-201ENST00000502249 4587 ntBASIC3.77□□□□□ -1.81
CDK5RAP1Q96SZ6 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.77□□□□□ -1.81
CDK5RAP1Q96SZ6 SNORD9-201ENST00000362566 104 ntBASIC3.77□□□□□ -1.81
CDK5RAP1Q96SZ6 RNA5SP119-201ENST00000362715 117 ntBASIC3.77□□□□□ -1.81
CDK5RAP1Q96SZ6 MIR625-201ENST00000385047 85 ntBASIC3.77□□□□□ -1.81
CDK5RAP1Q96SZ6 MIR548H3-201ENST00000408771 118 ntBASIC3.77□□□□□ -1.81
CDK5RAP1Q96SZ6 BX842559.1-201ENST00000419615 532 ntBASIC3.77□□□□□ -1.81
CDK5RAP1Q96SZ6 AL159169.1-201ENST00000421119 127 ntBASIC3.77□□□□□ -1.81
CDK5RAP1Q96SZ6 AC244098.2-201ENST00000422068 99 ntBASIC3.77□□□□□ -1.81
CDK5RAP1Q96SZ6 AC091286.1-201ENST00000431233 461 ntBASIC3.77□□□□□ -1.81
CDK5RAP1Q96SZ6 AL591704.1-201ENST00000432574 275 ntBASIC3.77□□□□□ -1.81
CDK5RAP1Q96SZ6 AC073063.1-201ENST00000434352 607 ntBASIC3.77□□□□□ -1.81
CDK5RAP1Q96SZ6 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.77□□□□□ -1.81
CDK5RAP1Q96SZ6 AC026784.1-201ENST00000507986 352 ntBASIC3.77□□□□□ -1.81
CDK5RAP1Q96SZ6 AC074198.2-201ENST00000508153 258 ntBASIC3.77□□□□□ -1.81
CDK5RAP1Q96SZ6 AC107393.1-201ENST00000512403 346 ntBASIC3.77□□□□□ -1.81
CDK5RAP1Q96SZ6 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.77□□□□□ -1.81
CDK5RAP1Q96SZ6 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.77□□□□□ -1.81
CDK5RAP1Q96SZ6 TRAV32-201ENST00000553993 340 ntBASIC3.77□□□□□ -1.81
CDK5RAP1Q96SZ6 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.77□□□□□ -1.81
CDK5RAP1Q96SZ6 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.77□□□□□ -1.81
CDK5RAP1Q96SZ6 OR1M4P-201ENST00000589199 287 ntBASIC3.77□□□□□ -1.81
CDK5RAP1Q96SZ6 AL121917.1-203ENST00000605534 577 ntBASIC3.77□□□□□ -1.81
CDK5RAP1Q96SZ6 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.77□□□□□ -1.81
CDK5RAP1Q96SZ6 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.77□□□□□ -1.81
CDK5RAP1Q96SZ6 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.77□□□□□ -1.81
CDK5RAP1Q96SZ6 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CDK5RAP1Q96SZ6 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.77□□□□□ -1.81
CDK5RAP1Q96SZ6 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.77□□□□□ -1.81
CDK5RAP1Q96SZ6 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDK5RAP1Q96SZ6 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
CDK5RAP1Q96SZ6 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDK5RAP1Q96SZ6 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDK5RAP1Q96SZ6 AL391987.6-201ENST00000305671 199 ntBASIC3.76□□□□□ -1.81
CDK5RAP1Q96SZ6 RNU6-545P-201ENST00000362681 104 ntBASIC3.76□□□□□ -1.81
CDK5RAP1Q96SZ6 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.76□□□□□ -1.81
CDK5RAP1Q96SZ6 HMGN2P8-201ENST00000391458 268 ntBASIC3.76□□□□□ -1.81
CDK5RAP1Q96SZ6 MIR1250-201ENST00000408098 113 ntBASIC3.76□□□□□ -1.81
CDK5RAP1Q96SZ6 RNU2-71P-201ENST00000411395 189 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms