Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 RNA5SP493-201ENST00000364115 91 ntBASIC0.67□□□□□ -2.3
AP1S3Q96PC3 RNU1-36P-201ENST00000365130 165 ntBASIC0.67□□□□□ -2.3
AP1S3Q96PC3 RNU6-14P-201ENST00000384630 106 ntBASIC0.67□□□□□ -2.3
AP1S3Q96PC3 RNU2-42P-201ENST00000410697 113 ntBASIC0.67□□□□□ -2.3
AP1S3Q96PC3 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.67□□□□□ -2.3
AP1S3Q96PC3 POLR2J4-204ENST00000418424 324 ntBASIC0.67□□□□□ -2.3
AP1S3Q96PC3 DEFB130D-201ENST00000426866 237 ntBASIC0.67□□□□□ -2.3
AP1S3Q96PC3 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.67□□□□□ -2.3
AP1S3Q96PC3 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.67□□□□□ -2.3
AP1S3Q96PC3 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC0.67□□□□□ -2.3
AP1S3Q96PC3 FDX1P2-201ENST00000450769 375 ntBASIC0.67□□□□□ -2.3
AP1S3Q96PC3 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
AP1S3Q96PC3 HMGB1P28-201ENST00000507778 552 ntBASIC0.67□□□□□ -2.3
AP1S3Q96PC3 AC010468.3-201ENST00000508225 458 ntBASIC0.67□□□□□ -2.3
AP1S3Q96PC3 AC093259.1-201ENST00000509755 300 ntBASIC0.67□□□□□ -2.3
AP1S3Q96PC3 SNORA31.3-201ENST00000516029 96 ntBASIC0.67□□□□□ -2.3
AP1S3Q96PC3 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC0.67□□□□□ -2.3
AP1S3Q96PC3 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.67□□□□□ -2.3
AP1S3Q96PC3 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.67□□□□□ -2.3
AP1S3Q96PC3 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
AP1S3Q96PC3 TRAV32-201ENST00000553993 340 ntBASIC0.67□□□□□ -2.3
AP1S3Q96PC3 AP003465.2-201ENST00000602571 373 ntBASIC0.67□□□□□ -2.3
AP1S3Q96PC3 AC073410.2-201ENST00000603240 332 ntBASIC0.67□□□□□ -2.3
AP1S3Q96PC3 AC096772.1-201ENST00000609146 564 ntBASIC0.67□□□□□ -2.3
AP1S3Q96PC3 AC093788.1-201ENST00000609356 927 ntBASIC0.67□□□□□ -2.3
AP1S3Q96PC3 AC005332.6-201ENST00000613178 446 ntBASIC0.67□□□□□ -2.3
AP1S3Q96PC3 AC107982.1-201ENST00000507171 1300 ntBASIC0.66□□□□□ -2.3
AP1S3Q96PC3 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.66□□□□□ -2.3
AP1S3Q96PC3 PCF11-AS1-201ENST00000602322 1516 ntBASIC0.66□□□□□ -2.3
AP1S3Q96PC3 MIR16-2-201ENST00000362117 81 ntBASIC0.66□□□□□ -2.3
AP1S3Q96PC3 RNU6-23P-201ENST00000363283 107 ntBASIC0.66□□□□□ -2.3
AP1S3Q96PC3 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC0.66□□□□□ -2.3
AP1S3Q96PC3 AL161935.2-201ENST00000414627 60 ntBASIC0.66□□□□□ -2.3
AP1S3Q96PC3 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC0.66□□□□□ -2.3
AP1S3Q96PC3 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC0.66□□□□□ -2.3
AP1S3Q96PC3 AC010095.1-201ENST00000443543 144 ntBASIC0.66□□□□□ -2.3
AP1S3Q96PC3 RPS27P1-201ENST00000450552 247 ntBASIC0.66□□□□□ -2.3
AP1S3Q96PC3 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC0.66□□□□□ -2.3
AP1S3Q96PC3 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.66□□□□□ -2.3
AP1S3Q96PC3 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC0.66□□□□□ -2.3
AP1S3Q96PC3 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.66□□□□□ -2.3
AP1S3Q96PC3 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.66□□□□□ -2.3
AP1S3Q96PC3 OR6C7P-201ENST00000547875 934 ntBASIC0.66□□□□□ -2.3
AP1S3Q96PC3 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC0.66□□□□□ -2.3
AP1S3Q96PC3 AC015688.6-201ENST00000577737 104 ntBASIC0.66□□□□□ -2.3
AP1S3Q96PC3 MIR3945-201ENST00000581853 98 ntBASIC0.66□□□□□ -2.3
AP1S3Q96PC3 AC090970.3-201ENST00000612566 866 ntBASIC0.66□□□□□ -2.3
AP1S3Q96PC3 AL590240.4-201ENST00000616908 390 ntBASIC0.66□□□□□ -2.3
AP1S3Q96PC3 AC009033.1-201ENST00000624279 431 ntBASIC0.66□□□□□ -2.3
AP1S3Q96PC3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.65□□□□□ -2.3
AP1S3Q96PC3 RNU6-1010P-201ENST00000362757 107 ntBASIC0.65□□□□□ -2.31
AP1S3Q96PC3 RNU6-883P-201ENST00000384597 107 ntBASIC0.65□□□□□ -2.31
AP1S3Q96PC3 RNU6-1222P-201ENST00000384615 107 ntBASIC0.65□□□□□ -2.31
AP1S3Q96PC3 SNORA17.3-201ENST00000391159 129 ntBASIC0.65□□□□□ -2.31
AP1S3Q96PC3 RPL23AP32-201ENST00000395315 459 ntBASIC0.65□□□□□ -2.31
AP1S3Q96PC3 MRPL35P1-201ENST00000404272 572 ntBASIC0.65□□□□□ -2.31
AP1S3Q96PC3 AC068533.2-201ENST00000411872 306 ntBASIC0.65□□□□□ -2.31
AP1S3Q96PC3 RPL21P24-201ENST00000413752 448 ntBASIC0.65□□□□□ -2.31
AP1S3Q96PC3 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.65□□□□□ -2.31
AP1S3Q96PC3 C8orf59P1-201ENST00000429930 303 ntBASIC0.65□□□□□ -2.31
AP1S3Q96PC3 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.65□□□□□ -2.31
AP1S3Q96PC3 MTND2P20-201ENST00000440805 661 ntBASIC0.65□□□□□ -2.31
AP1S3Q96PC3 MTND5P14-201ENST00000441481 1267 ntBASIC0.65□□□□□ -2.31
AP1S3Q96PC3 PGBD4P5-201ENST00000445958 426 ntBASIC0.65□□□□□ -2.31
AP1S3Q96PC3 AC104058.1-201ENST00000448028 297 ntBASIC0.65□□□□□ -2.31
AP1S3Q96PC3 RPL30P6-201ENST00000475925 342 ntBASIC0.65□□□□□ -2.31
AP1S3Q96PC3 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
AP1S3Q96PC3 RPS3AP22-201ENST00000488297 769 ntBASIC0.65□□□□□ -2.31
AP1S3Q96PC3 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC0.65□□□□□ -2.31
AP1S3Q96PC3 LAMTOR3P2-201ENST00000504479 232 ntBASIC0.65□□□□□ -2.31
AP1S3Q96PC3 YWHAEP4-201ENST00000505390 198 ntBASIC0.65□□□□□ -2.31
AP1S3Q96PC3 HMGN1P13-201ENST00000505795 138 ntBASIC0.65□□□□□ -2.31
AP1S3Q96PC3 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC0.65□□□□□ -2.31
AP1S3Q96PC3 MTCYBP40-201ENST00000509390 1135 ntBASIC0.65□□□□□ -2.31
AP1S3Q96PC3 ACA64.5-201ENST00000516207 127 ntBASIC0.65□□□□□ -2.31
AP1S3Q96PC3 RNU6-572P-201ENST00000516724 80 ntBASIC0.65□□□□□ -2.31
AP1S3Q96PC3 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.65□□□□□ -2.31
AP1S3Q96PC3 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.65□□□□□ -2.31
AP1S3Q96PC3 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC0.65□□□□□ -2.31
AP1S3Q96PC3 HIGD1AP17-201ENST00000554576 276 ntBASIC0.65□□□□□ -2.31
AP1S3Q96PC3 MIR3937-201ENST00000580135 106 ntBASIC0.65□□□□□ -2.31
AP1S3Q96PC3 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC0.65□□□□□ -2.31
AP1S3Q96PC3 AC012065.4-201ENST00000602445 679 ntBASIC0.65□□□□□ -2.31
AP1S3Q96PC3 OR4H6P-202ENST00000603819 340 ntBASIC0.65□□□□□ -2.31
AP1S3Q96PC3 AL133445.2-201ENST00000611191 527 ntBASIC0.65□□□□□ -2.31
AP1S3Q96PC3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.65□□□□□ -2.31
AP1S3Q96PC3 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
AP1S3Q96PC3 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.64□□□□□ -2.31
AP1S3Q96PC3 SNORA11.2-201ENST00000408318 127 ntBASIC0.64□□□□□ -2.31
AP1S3Q96PC3 AC004965.1-201ENST00000413033 213 ntBASIC0.64□□□□□ -2.31
AP1S3Q96PC3 AC138623.1-201ENST00000418060 216 ntBASIC0.64□□□□□ -2.31
AP1S3Q96PC3 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC0.64□□□□□ -2.31
AP1S3Q96PC3 AL591806.2-201ENST00000433122 173 ntBASIC0.64□□□□□ -2.31
AP1S3Q96PC3 AC079776.3-201ENST00000450665 370 ntBASIC0.64□□□□□ -2.31
AP1S3Q96PC3 AL353752.1-201ENST00000454946 260 ntBASIC0.64□□□□□ -2.31
AP1S3Q96PC3 AC112198.4-201ENST00000515450 351 ntBASIC0.64□□□□□ -2.31
AP1S3Q96PC3 RNU6-583P-201ENST00000516012 92 ntBASIC0.64□□□□□ -2.31
AP1S3Q96PC3 RNU6-991P-201ENST00000516168 107 ntBASIC0.64□□□□□ -2.31
AP1S3Q96PC3 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
AP1S3Q96PC3 MIR4782-201ENST00000577987 79 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms