Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 AC025423.5-201ENST00000550230 219 ntBASIC3.26□□□□□ -1.89
CCDC138Q96M89 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC138Q96M89 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC138Q96M89 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.26□□□□□ -1.89
CCDC138Q96M89 AL355365.1-201ENST00000616480 294 ntBASIC3.26□□□□□ -1.89
CCDC138Q96M89 AC091953.5-201ENST00000622919 233 ntBASIC3.26□□□□□ -1.89
CCDC138Q96M89 AC009033.1-201ENST00000624279 431 ntBASIC3.26□□□□□ -1.89
CCDC138Q96M89 MIR7515-201ENST00000637837 67 ntBASIC3.26□□□□□ -1.89
CCDC138Q96M89 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC138Q96M89 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC138Q96M89 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC138Q96M89 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC138Q96M89 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CCDC138Q96M89 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.26□□□□□ -1.89
CCDC138Q96M89 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC138Q96M89 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
CCDC138Q96M89 MIR208A-201ENST00000362287 71 ntBASIC3.25□□□□□ -1.89
CCDC138Q96M89 Y_RNA.72-201ENST00000362894 103 ntBASIC3.25□□□□□ -1.89
CCDC138Q96M89 RNU6-487P-201ENST00000365430 104 ntBASIC3.25□□□□□ -1.89
CCDC138Q96M89 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC138Q96M89 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC138Q96M89 SNORA32.2-201ENST00000384049 122 ntBASIC3.25□□□□□ -1.89
CCDC138Q96M89 RNU6-214P-201ENST00000384130 107 ntBASIC3.25□□□□□ -1.89
CCDC138Q96M89 MT-TL1-201ENST00000386347 75 ntBASIC3.25□□□□□ -1.89
CCDC138Q96M89 RN7SKP123-201ENST00000410732 291 ntBASIC3.25□□□□□ -1.89
CCDC138Q96M89 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.25□□□□□ -1.89
CCDC138Q96M89 AL513043.1-201ENST00000439124 535 ntBASIC3.25□□□□□ -1.89
CCDC138Q96M89 CYCSP35-201ENST00000451978 304 ntBASIC3.25□□□□□ -1.89
CCDC138Q96M89 AC013470.1-201ENST00000453438 462 ntBASIC3.25□□□□□ -1.89
CCDC138Q96M89 RNU7-66P-201ENST00000459469 62 ntBASIC3.25□□□□□ -1.89
CCDC138Q96M89 AP001324.2-201ENST00000461163 319 ntBASIC3.25□□□□□ -1.89
CCDC138Q96M89 AC133134.1-201ENST00000466800 359 ntBASIC3.25□□□□□ -1.89
CCDC138Q96M89 RPL7P49-201ENST00000471402 708 ntBASIC3.25□□□□□ -1.89
CCDC138Q96M89 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC138Q96M89 AC010486.1-201ENST00000511793 424 ntBASIC3.25□□□□□ -1.89
CCDC138Q96M89 SNORA31.6-201ENST00000516241 130 ntBASIC3.25□□□□□ -1.89
CCDC138Q96M89 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC138Q96M89 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC138Q96M89 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC138Q96M89 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC138Q96M89 FAM157A-202ENST00000615155 405 ntBASIC3.25□□□□□ -1.89
CCDC138Q96M89 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC138Q96M89 AC012314.7-201ENST00000619693 93 ntBASIC3.25□□□□□ -1.89
CCDC138Q96M89 AL136221.1-201ENST00000621449 509 ntBASIC3.25□□□□□ -1.89
CCDC138Q96M89 AC099654.14-201ENST00000638599 341 ntBASIC3.25□□□□□ -1.89
CCDC138Q96M89 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
CCDC138Q96M89 AC138915.1-201ENST00000565427 1685 ntBASIC3.24□□□□□ -1.89
CCDC138Q96M89 AL109809.4-201ENST00000603520 2185 ntBASIC3.24□□□□□ -1.89
CCDC138Q96M89 RNU6-510P-201ENST00000391239 108 ntBASIC3.24□□□□□ -1.89
CCDC138Q96M89 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC138Q96M89 AL117339.3-201ENST00000418733 162 ntBASIC3.24□□□□□ -1.89
CCDC138Q96M89 AC244505.4-201ENST00000434905 287 ntBASIC3.24□□□□□ -1.89
CCDC138Q96M89 AC005019.1-201ENST00000436455 431 ntBASIC3.24□□□□□ -1.89
CCDC138Q96M89 SSXP5-201ENST00000443473 287 ntBASIC3.24□□□□□ -1.89
CCDC138Q96M89 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC138Q96M89 AC006445.1-201ENST00000491925 405 ntBASIC3.24□□□□□ -1.89
CCDC138Q96M89 AC008628.2-201ENST00000502605 298 ntBASIC3.24□□□□□ -1.89
CCDC138Q96M89 AC116353.2-201ENST00000505332 712 ntBASIC3.24□□□□□ -1.89
CCDC138Q96M89 RNU6-1332P-201ENST00000516666 104 ntBASIC3.24□□□□□ -1.89
CCDC138Q96M89 SNORA31.23-201ENST00000517219 133 ntBASIC3.24□□□□□ -1.89
CCDC138Q96M89 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.24□□□□□ -1.89
CCDC138Q96M89 AP005597.4-201ENST00000526762 229 ntBASIC3.24□□□□□ -1.89
CCDC138Q96M89 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC138Q96M89 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
CCDC138Q96M89 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.24□□□□□ -1.89
CCDC138Q96M89 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.24□□□□□ -1.89
CCDC138Q96M89 AC100830.2-201ENST00000581636 240 ntBASIC3.24□□□□□ -1.89
CCDC138Q96M89 AC011712.1-201ENST00000588959 234 ntBASIC3.24□□□□□ -1.89
CCDC138Q96M89 AC021646.1-201ENST00000605469 484 ntBASIC3.24□□□□□ -1.89
CCDC138Q96M89 AC096772.1-201ENST00000609146 564 ntBASIC3.24□□□□□ -1.89
CCDC138Q96M89 uc_338.1-201ENST00000612113 180 ntBASIC3.24□□□□□ -1.89
CCDC138Q96M89 AC084757.4-201ENST00000616350 526 ntBASIC3.24□□□□□ -1.89
CCDC138Q96M89 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.24□□□□□ -1.89
CCDC138Q96M89 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC138Q96M89 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.24□□□□□ -1.89
CCDC138Q96M89 MTND5P30-201ENST00000452896 1731 ntBASIC3.24□□□□□ -1.89
CCDC138Q96M89 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC138Q96M89 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
CCDC138Q96M89 RBBP8P1-201ENST00000449447 1844 ntBASIC3.23□□□□□ -1.89
CCDC138Q96M89 Z83843.1-201ENST00000604070 3685 ntBASIC3.23□□□□□ -1.89
CCDC138Q96M89 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC138Q96M89 SNORD56.1-201ENST00000362913 68 ntBASIC3.23□□□□□ -1.89
CCDC138Q96M89 RNU6-1252P-201ENST00000363054 104 ntBASIC3.23□□□□□ -1.89
CCDC138Q96M89 RNU6-827P-201ENST00000365553 106 ntBASIC3.23□□□□□ -1.89
CCDC138Q96M89 RNU6-128P-201ENST00000383976 107 ntBASIC3.23□□□□□ -1.89
CCDC138Q96M89 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CCDC138Q96M89 RNU6-1148P-201ENST00000410992 104 ntBASIC3.23□□□□□ -1.89
CCDC138Q96M89 VN1R36P-201ENST00000414936 291 ntBASIC3.23□□□□□ -1.89
CCDC138Q96M89 AL513477.1-202ENST00000417061 214 ntBASIC3.23□□□□□ -1.89
CCDC138Q96M89 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC138Q96M89 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.23□□□□□ -1.89
CCDC138Q96M89 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC138Q96M89 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.23□□□□□ -1.89
CCDC138Q96M89 PRSS3P4-201ENST00000453323 162 ntBASIC3.23□□□□□ -1.89
CCDC138Q96M89 RPL21P10-201ENST00000463521 490 ntBASIC3.23□□□□□ -1.89
CCDC138Q96M89 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC138Q96M89 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.23□□□□□ -1.89
CCDC138Q96M89 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.23□□□□□ -1.89
CCDC138Q96M89 AC025465.4-201ENST00000513422 638 ntBASIC3.23□□□□□ -1.89
CCDC138Q96M89 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms