Protein–RNA interactions for Protein: Q96JN2

CCDC136, Coiled-coil domain-containing protein 136, humanhuman

Predictions only

Length 1,154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136Q96JN2 AC090525.1-201ENST00000479116 478 ntBASIC3.58□□□□□ -1.84
CCDC136Q96JN2 AC006445.1-201ENST00000491925 405 ntBASIC3.58□□□□□ -1.84
CCDC136Q96JN2 AC008885.1-201ENST00000514930 301 ntBASIC3.58□□□□□ -1.84
CCDC136Q96JN2 RNU4-29P-201ENST00000515943 174 ntBASIC3.58□□□□□ -1.84
CCDC136Q96JN2 SNORA70.24-201ENST00000517233 118 ntBASIC3.58□□□□□ -1.84
CCDC136Q96JN2 RNU1-104P-201ENST00000517280 175 ntBASIC3.58□□□□□ -1.84
CCDC136Q96JN2 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.58□□□□□ -1.84
CCDC136Q96JN2 AL512310.1-201ENST00000548639 172 ntBASIC3.58□□□□□ -1.84
CCDC136Q96JN2 AL118558.2-201ENST00000556294 238 ntBASIC3.58□□□□□ -1.84
CCDC136Q96JN2 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.58□□□□□ -1.84
CCDC136Q96JN2 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC136Q96JN2 AC012493.2-201ENST00000595083 291 ntBASIC3.58□□□□□ -1.84
CCDC136Q96JN2 AC008121.1-201ENST00000603244 268 ntBASIC3.58□□□□□ -1.84
CCDC136Q96JN2 AL049779.4-201ENST00000604500 156 ntBASIC3.58□□□□□ -1.84
CCDC136Q96JN2 AL021997.1-201ENST00000605757 193 ntBASIC3.58□□□□□ -1.84
CCDC136Q96JN2 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.58□□□□□ -1.84
CCDC136Q96JN2 YWHAEP7-203ENST00000622054 312 ntBASIC3.58□□□□□ -1.84
CCDC136Q96JN2 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.58□□□□□ -1.84
CCDC136Q96JN2 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CCDC136Q96JN2 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
CCDC136Q96JN2 SNORA71.1-201ENST00000364523 117 ntBASIC3.57□□□□□ -1.84
CCDC136Q96JN2 RNU1-138P-201ENST00000384093 164 ntBASIC3.57□□□□□ -1.84
CCDC136Q96JN2 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.57□□□□□ -1.84
CCDC136Q96JN2 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC136Q96JN2 HMGB1P31-201ENST00000437242 427 ntBASIC3.57□□□□□ -1.84
CCDC136Q96JN2 DYNLL1P5-201ENST00000467158 270 ntBASIC3.57□□□□□ -1.84
CCDC136Q96JN2 MED28P2-201ENST00000475771 317 ntBASIC3.57□□□□□ -1.84
CCDC136Q96JN2 MTAPP1-201ENST00000489154 819 ntBASIC3.57□□□□□ -1.84
CCDC136Q96JN2 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.57□□□□□ -1.84
CCDC136Q96JN2 TBCAP3-201ENST00000512475 312 ntBASIC3.57□□□□□ -1.84
CCDC136Q96JN2 SCARNA13-201ENST00000516672 275 ntBASIC3.57□□□□□ -1.84
CCDC136Q96JN2 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.57□□□□□ -1.84
CCDC136Q96JN2 ZNF861P-201ENST00000588126 639 ntBASIC3.57□□□□□ -1.84
CCDC136Q96JN2 AL670379.10-201ENST00000604330 253 ntBASIC3.57□□□□□ -1.84
CCDC136Q96JN2 ATP1B3P1-201ENST00000605365 821 ntBASIC3.57□□□□□ -1.84
CCDC136Q96JN2 AL670379.9-201ENST00000605428 253 ntBASIC3.57□□□□□ -1.84
CCDC136Q96JN2 AC123912.5-201ENST00000605470 343 ntBASIC3.57□□□□□ -1.84
CCDC136Q96JN2 MIR8057-201ENST00000620957 69 ntBASIC3.57□□□□□ -1.84
CCDC136Q96JN2 SCARNA4-202ENST00000625402 129 ntBASIC3.57□□□□□ -1.84
CCDC136Q96JN2 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.57□□□□□ -1.84
CCDC136Q96JN2 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.56□□□□□ -1.84
CCDC136Q96JN2 RNU6-266P-201ENST00000364225 107 ntBASIC3.56□□□□□ -1.84
CCDC136Q96JN2 RNU4-66P-201ENST00000365199 138 ntBASIC3.56□□□□□ -1.84
CCDC136Q96JN2 MIR181A1-201ENST00000385026 110 ntBASIC3.56□□□□□ -1.84
CCDC136Q96JN2 NUP35P1-201ENST00000422734 947 ntBASIC3.56□□□□□ -1.84
CCDC136Q96JN2 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC136Q96JN2 MTCO3P38-201ENST00000468910 766 ntBASIC3.56□□□□□ -1.84
CCDC136Q96JN2 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC136Q96JN2 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.56□□□□□ -1.84
CCDC136Q96JN2 MTCO3P23-201ENST00000561363 289 ntBASIC3.56□□□□□ -1.84
CCDC136Q96JN2 AC009163.5-201ENST00000575421 637 ntBASIC3.56□□□□□ -1.84
CCDC136Q96JN2 AL356575.1-201ENST00000603008 283 ntBASIC3.56□□□□□ -1.84
CCDC136Q96JN2 U2.17-201ENST00000611454 95 ntBASIC3.56□□□□□ -1.84
CCDC136Q96JN2 AL162274.2-201ENST00000614406 332 ntBASIC3.56□□□□□ -1.84
CCDC136Q96JN2 AC080128.1-201ENST00000474389 1917 ntBASIC3.56□□□□□ -1.84
CCDC136Q96JN2 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.55□□□□□ -1.84
CCDC136Q96JN2 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC136Q96JN2 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC136Q96JN2 MIR26A1-201ENST00000362205 77 ntBASIC3.55□□□□□ -1.84
CCDC136Q96JN2 Y_RNA.38-201ENST00000362617 102 ntBASIC3.55□□□□□ -1.84
CCDC136Q96JN2 RNU6-37P-201ENST00000362692 107 ntBASIC3.55□□□□□ -1.84
CCDC136Q96JN2 RNU6-11P-201ENST00000364234 107 ntBASIC3.55□□□□□ -1.84
CCDC136Q96JN2 RNU6-7-201ENST00000364784 107 ntBASIC3.55□□□□□ -1.84
CCDC136Q96JN2 RNU6-8-201ENST00000365467 107 ntBASIC3.55□□□□□ -1.84
CCDC136Q96JN2 RNU6-25P-201ENST00000383873 107 ntBASIC3.55□□□□□ -1.84
CCDC136Q96JN2 RNU6-1-201ENST00000383898 107 ntBASIC3.55□□□□□ -1.84
CCDC136Q96JN2 RNU6-38P-201ENST00000384085 107 ntBASIC3.55□□□□□ -1.84
CCDC136Q96JN2 RNU6-48P-201ENST00000384161 107 ntBASIC3.55□□□□□ -1.84
CCDC136Q96JN2 RNU6-36P-201ENST00000384172 107 ntBASIC3.55□□□□□ -1.84
CCDC136Q96JN2 RNU6-4P-201ENST00000384205 107 ntBASIC3.55□□□□□ -1.84
CCDC136Q96JN2 SNORA9-201ENST00000384215 133 ntBASIC3.55□□□□□ -1.84
CCDC136Q96JN2 RNU6-5P-201ENST00000384238 107 ntBASIC3.55□□□□□ -1.84
CCDC136Q96JN2 RNU6-3P-201ENST00000384314 107 ntBASIC3.55□□□□□ -1.84
CCDC136Q96JN2 RNU6-16P-201ENST00000384385 107 ntBASIC3.55□□□□□ -1.84
CCDC136Q96JN2 SNORD116-20-201ENST00000384529 92 ntBASIC3.55□□□□□ -1.84
CCDC136Q96JN2 RNU6-15P-201ENST00000384534 107 ntBASIC3.55□□□□□ -1.84
CCDC136Q96JN2 RNU6-2-201ENST00000384627 107 ntBASIC3.55□□□□□ -1.84
CCDC136Q96JN2 RNU6-29P-201ENST00000384637 107 ntBASIC3.55□□□□□ -1.84
CCDC136Q96JN2 RNU6-9-201ENST00000384776 107 ntBASIC3.55□□□□□ -1.84
CCDC136Q96JN2 RNU6-33P-201ENST00000384793 107 ntBASIC3.55□□□□□ -1.84
CCDC136Q96JN2 MIR491-201ENST00000384877 84 ntBASIC3.55□□□□□ -1.84
CCDC136Q96JN2 MIR592-201ENST00000384959 97 ntBASIC3.55□□□□□ -1.84
CCDC136Q96JN2 MIR218-1-201ENST00000384999 110 ntBASIC3.55□□□□□ -1.84
CCDC136Q96JN2 RNA5SP219-201ENST00000390940 113 ntBASIC3.55□□□□□ -1.84
CCDC136Q96JN2 MIR548F1-201ENST00000408667 84 ntBASIC3.55□□□□□ -1.84
CCDC136Q96JN2 RNU6-1140P-201ENST00000410517 106 ntBASIC3.55□□□□□ -1.84
CCDC136Q96JN2 AF274854.1-201ENST00000413236 615 ntBASIC3.55□□□□□ -1.84
CCDC136Q96JN2 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC136Q96JN2 FABP5P14-201ENST00000437273 393 ntBASIC3.55□□□□□ -1.84
CCDC136Q96JN2 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC136Q96JN2 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC136Q96JN2 RNU6-333P-201ENST00000459117 107 ntBASIC3.55□□□□□ -1.84
CCDC136Q96JN2 RNU7-167P-201ENST00000459160 62 ntBASIC3.55□□□□□ -1.84
CCDC136Q96JN2 AC087884.1-201ENST00000469738 328 ntBASIC3.55□□□□□ -1.84
CCDC136Q96JN2 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC136Q96JN2 AC091826.1-201ENST00000514065 313 ntBASIC3.55□□□□□ -1.84
CCDC136Q96JN2 SNORA25.17-201ENST00000517184 124 ntBASIC3.55□□□□□ -1.84
CCDC136Q96JN2 AC009812.2-201ENST00000517657 457 ntBASIC3.55□□□□□ -1.84
CCDC136Q96JN2 AL138976.2-201ENST00000563989 694 ntBASIC3.55□□□□□ -1.84
CCDC136Q96JN2 MIR3199-1-201ENST00000582434 88 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms