Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 RPL23AP50-201ENST00000434149 455 ntBASIC4.08□□□□□ -1.76
CHAMP1Q96JM3 AC099799.1-201ENST00000439809 192 ntBASIC4.08□□□□□ -1.76
CHAMP1Q96JM3 AL731563.1-201ENST00000442202 214 ntBASIC4.08□□□□□ -1.76
CHAMP1Q96JM3 AL133162.1-201ENST00000463228 453 ntBASIC4.08□□□□□ -1.76
CHAMP1Q96JM3 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.08□□□□□ -1.76
CHAMP1Q96JM3 RPL17P19-201ENST00000489069 552 ntBASIC4.08□□□□□ -1.76
CHAMP1Q96JM3 AC139453.3-201ENST00000493276 369 ntBASIC4.08□□□□□ -1.76
CHAMP1Q96JM3 AC078918.1-201ENST00000498515 228 ntBASIC4.08□□□□□ -1.76
CHAMP1Q96JM3 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CHAMP1Q96JM3 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC4.08□□□□□ -1.76
CHAMP1Q96JM3 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.08□□□□□ -1.76
CHAMP1Q96JM3 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.08□□□□□ -1.76
CHAMP1Q96JM3 RNA5SP290-201ENST00000517133 127 ntBASIC4.08□□□□□ -1.76
CHAMP1Q96JM3 RN7SKP57-201ENST00000517248 293 ntBASIC4.08□□□□□ -1.76
CHAMP1Q96JM3 CBX3P8-201ENST00000532412 525 ntBASIC4.08□□□□□ -1.76
CHAMP1Q96JM3 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.08□□□□□ -1.76
CHAMP1Q96JM3 TGIF1P1-201ENST00000558095 802 ntBASIC4.08□□□□□ -1.76
CHAMP1Q96JM3 U6.105-201ENST00000637379 88 ntBASIC4.08□□□□□ -1.76
CHAMP1Q96JM3 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CHAMP1Q96JM3 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.07□□□□□ -1.76
CHAMP1Q96JM3 Y_RNA.48-201ENST00000362710 103 ntBASIC4.07□□□□□ -1.76
CHAMP1Q96JM3 Y_RNA.149-201ENST00000363558 117 ntBASIC4.07□□□□□ -1.76
CHAMP1Q96JM3 Y_RNA.401-201ENST00000383965 117 ntBASIC4.07□□□□□ -1.76
CHAMP1Q96JM3 RNU6-166P-201ENST00000384371 107 ntBASIC4.07□□□□□ -1.76
CHAMP1Q96JM3 MIR128-1-201ENST00000384921 82 ntBASIC4.07□□□□□ -1.76
CHAMP1Q96JM3 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CHAMP1Q96JM3 AL138885.1-201ENST00000405921 675 ntBASIC4.07□□□□□ -1.76
CHAMP1Q96JM3 MIR1183-201ENST00000408856 89 ntBASIC4.07□□□□□ -1.76
CHAMP1Q96JM3 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.07□□□□□ -1.76
CHAMP1Q96JM3 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC4.07□□□□□ -1.76
CHAMP1Q96JM3 HIGD1AP2-201ENST00000446367 280 ntBASIC4.07□□□□□ -1.76
CHAMP1Q96JM3 RPS3AP46-201ENST00000448352 682 ntBASIC4.07□□□□□ -1.76
CHAMP1Q96JM3 NDUFS5P3-201ENST00000450668 321 ntBASIC4.07□□□□□ -1.76
CHAMP1Q96JM3 ANP32BP2-201ENST00000454525 545 ntBASIC4.07□□□□□ -1.76
CHAMP1Q96JM3 AL353752.1-201ENST00000454946 260 ntBASIC4.07□□□□□ -1.76
CHAMP1Q96JM3 AL583843.1-201ENST00000456070 346 ntBASIC4.07□□□□□ -1.76
CHAMP1Q96JM3 BX510359.1-201ENST00000456973 237 ntBASIC4.07□□□□□ -1.76
CHAMP1Q96JM3 KC877373.1-201ENST00000479066 408 ntBASIC4.07□□□□□ -1.76
CHAMP1Q96JM3 RN7SL429P-201ENST00000479090 223 ntBASIC4.07□□□□□ -1.76
CHAMP1Q96JM3 RN7SL293P-201ENST00000481765 281 ntBASIC4.07□□□□□ -1.76
CHAMP1Q96JM3 RN7SL489P-201ENST00000486185 223 ntBASIC4.07□□□□□ -1.76
CHAMP1Q96JM3 RN7SL327P-201ENST00000488659 223 ntBASIC4.07□□□□□ -1.76
CHAMP1Q96JM3 AC105758.1-201ENST00000506038 399 ntBASIC4.07□□□□□ -1.76
CHAMP1Q96JM3 HMGB1P14-201ENST00000557424 591 ntBASIC4.07□□□□□ -1.76
CHAMP1Q96JM3 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC4.07□□□□□ -1.76
CHAMP1Q96JM3 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC4.07□□□□□ -1.76
CHAMP1Q96JM3 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.07□□□□□ -1.76
CHAMP1Q96JM3 PRR13P7-201ENST00000605538 430 ntBASIC4.07□□□□□ -1.76
CHAMP1Q96JM3 MIR3976-201ENST00000606807 139 ntBASIC4.07□□□□□ -1.76
CHAMP1Q96JM3 RN7SL853P-201ENST00000617250 223 ntBASIC4.07□□□□□ -1.76
CHAMP1Q96JM3 AL713922.2-201ENST00000619384 716 ntBASIC4.07□□□□□ -1.76
CHAMP1Q96JM3 U4.1-201ENST00000620349 87 ntBASIC4.07□□□□□ -1.76
CHAMP1Q96JM3 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CHAMP1Q96JM3 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
CHAMP1Q96JM3 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.07□□□□□ -1.76
CHAMP1Q96JM3 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.07□□□□□ -1.76
CHAMP1Q96JM3 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CHAMP1Q96JM3 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.07□□□□□ -1.76
CHAMP1Q96JM3 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC4.07□□□□□ -1.76
CHAMP1Q96JM3 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.06□□□□□ -1.76
CHAMP1Q96JM3 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CHAMP1Q96JM3 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.06□□□□□ -1.76
CHAMP1Q96JM3 SNORD9-201ENST00000362566 104 ntBASIC4.06□□□□□ -1.76
CHAMP1Q96JM3 RNU6-1317P-201ENST00000364582 104 ntBASIC4.06□□□□□ -1.76
CHAMP1Q96JM3 RNU6-741P-201ENST00000383889 107 ntBASIC4.06□□□□□ -1.76
CHAMP1Q96JM3 RNU6-790P-201ENST00000384479 105 ntBASIC4.06□□□□□ -1.76
CHAMP1Q96JM3 MIR3074-201ENST00000384885 81 ntBASIC4.06□□□□□ -1.76
CHAMP1Q96JM3 U3.42-201ENST00000408746 214 ntBASIC4.06□□□□□ -1.76
CHAMP1Q96JM3 PGBD4P6-201ENST00000421501 610 ntBASIC4.06□□□□□ -1.76
CHAMP1Q96JM3 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.06□□□□□ -1.76
CHAMP1Q96JM3 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CHAMP1Q96JM3 AC007919.1-201ENST00000429380 217 ntBASIC4.06□□□□□ -1.76
CHAMP1Q96JM3 AL627311.1-201ENST00000431514 115 ntBASIC4.06□□□□□ -1.76
CHAMP1Q96JM3 AL031274.1-201ENST00000450334 232 ntBASIC4.06□□□□□ -1.76
CHAMP1Q96JM3 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CHAMP1Q96JM3 RNU6-1037P-201ENST00000459571 107 ntBASIC4.06□□□□□ -1.76
CHAMP1Q96JM3 AP000873.1-201ENST00000463987 400 ntBASIC4.06□□□□□ -1.76
CHAMP1Q96JM3 FO393415.2-201ENST00000480085 343 ntBASIC4.06□□□□□ -1.76
CHAMP1Q96JM3 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.06□□□□□ -1.76
CHAMP1Q96JM3 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.06□□□□□ -1.76
CHAMP1Q96JM3 RNU6-1073P-201ENST00000517182 106 ntBASIC4.06□□□□□ -1.76
CHAMP1Q96JM3 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.06□□□□□ -1.76
CHAMP1Q96JM3 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.06□□□□□ -1.76
CHAMP1Q96JM3 TRAV28-201ENST00000557548 323 ntBASIC4.06□□□□□ -1.76
CHAMP1Q96JM3 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.06□□□□□ -1.76
CHAMP1Q96JM3 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.06□□□□□ -1.76
CHAMP1Q96JM3 AC136601.2-201ENST00000604356 474 ntBASIC4.06□□□□□ -1.76
CHAMP1Q96JM3 AP000787.2-201ENST00000604432 568 ntBASIC4.06□□□□□ -1.76
CHAMP1Q96JM3 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.06□□□□□ -1.76
CHAMP1Q96JM3 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.06□□□□□ -1.76
CHAMP1Q96JM3 MIR3651-201ENST00000630427 90 ntBASIC4.06□□□□□ -1.76
CHAMP1Q96JM3 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
CHAMP1Q96JM3 AL359693.1-201ENST00000614959 2407 ntBASIC4.06□□□□□ -1.76
CHAMP1Q96JM3 AC008725.1-201ENST00000605123 2263 ntBASIC4.06□□□□□ -1.76
CHAMP1Q96JM3 AC007390.2-201ENST00000606229 3803 ntBASIC4.06□□□□□ -1.76
CHAMP1Q96JM3 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CHAMP1Q96JM3 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CHAMP1Q96JM3 AP001486.2-201ENST00000561652 5113 ntBASIC4.05□□□□□ -1.76
CHAMP1Q96JM3 AC007685.1-201ENST00000329806 452 ntBASIC4.05□□□□□ -1.76
CHAMP1Q96JM3 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms