Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.19□□□□□ -1.9
CTHRC1Q96CG8 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.19□□□□□ -1.9
CTHRC1Q96CG8 RPL9P9-202ENST00000466501 579 ntBASIC3.19□□□□□ -1.9
CTHRC1Q96CG8 AC025518.1-201ENST00000479856 347 ntBASIC3.19□□□□□ -1.9
CTHRC1Q96CG8 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.19□□□□□ -1.9
CTHRC1Q96CG8 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.19□□□□□ -1.9
CTHRC1Q96CG8 H3F3AP1-201ENST00000559984 334 ntBASIC3.19□□□□□ -1.9
CTHRC1Q96CG8 CYCSP39-201ENST00000565821 309 ntBASIC3.19□□□□□ -1.9
CTHRC1Q96CG8 MIR3944-201ENST00000581277 108 ntBASIC3.19□□□□□ -1.9
CTHRC1Q96CG8 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.19□□□□□ -1.9
CTHRC1Q96CG8 AC006557.5-201ENST00000603126 811 ntBASIC3.19□□□□□ -1.9
CTHRC1Q96CG8 AC099778.2-201ENST00000610904 211 ntBASIC3.19□□□□□ -1.9
CTHRC1Q96CG8 AC004852.3-201ENST00000614131 326 ntBASIC3.19□□□□□ -1.9
CTHRC1Q96CG8 MIR7975-201ENST00000619350 68 ntBASIC3.19□□□□□ -1.9
CTHRC1Q96CG8 AC012314.7-201ENST00000619693 93 ntBASIC3.19□□□□□ -1.9
CTHRC1Q96CG8 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.19□□□□□ -1.9
CTHRC1Q96CG8 AC073308.1-201ENST00000623696 305 ntBASIC3.19□□□□□ -1.9
CTHRC1Q96CG8 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.19□□□□□ -1.9
CTHRC1Q96CG8 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.19□□□□□ -1.9
CTHRC1Q96CG8 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
CTHRC1Q96CG8 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CTHRC1Q96CG8 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.19□□□□□ -1.9
CTHRC1Q96CG8 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.18□□□□□ -1.9
CTHRC1Q96CG8 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
CTHRC1Q96CG8 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.18□□□□□ -1.9
CTHRC1Q96CG8 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CTHRC1Q96CG8 RNA5SP295-201ENST00000362655 121 ntBASIC3.18□□□□□ -1.9
CTHRC1Q96CG8 Y_RNA.395-201ENST00000383945 109 ntBASIC3.18□□□□□ -1.9
CTHRC1Q96CG8 Y_RNA.422-201ENST00000384054 114 ntBASIC3.18□□□□□ -1.9
CTHRC1Q96CG8 RNU6-72P-201ENST00000384285 79 ntBASIC3.18□□□□□ -1.9
CTHRC1Q96CG8 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.18□□□□□ -1.9
CTHRC1Q96CG8 RNU6-325P-201ENST00000411132 105 ntBASIC3.18□□□□□ -1.9
CTHRC1Q96CG8 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.18□□□□□ -1.9
CTHRC1Q96CG8 RPL23AP50-201ENST00000434149 455 ntBASIC3.18□□□□□ -1.9
CTHRC1Q96CG8 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.18□□□□□ -1.9
CTHRC1Q96CG8 DAP3P1-201ENST00000441522 278 ntBASIC3.18□□□□□ -1.9
CTHRC1Q96CG8 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.18□□□□□ -1.9
CTHRC1Q96CG8 RPL26P9-201ENST00000457466 433 ntBASIC3.18□□□□□ -1.9
CTHRC1Q96CG8 snoU13.22-201ENST00000459428 104 ntBASIC3.18□□□□□ -1.9
CTHRC1Q96CG8 U8.21-201ENST00000459536 136 ntBASIC3.18□□□□□ -1.9
CTHRC1Q96CG8 RPL23AP67-201ENST00000465341 474 ntBASIC3.18□□□□□ -1.9
CTHRC1Q96CG8 AC133134.1-201ENST00000466800 359 ntBASIC3.18□□□□□ -1.9
CTHRC1Q96CG8 AC096576.1-201ENST00000489014 359 ntBASIC3.18□□□□□ -1.9
CTHRC1Q96CG8 AC114801.2-201ENST00000503825 781 ntBASIC3.18□□□□□ -1.9
CTHRC1Q96CG8 AK3P2-201ENST00000507976 429 ntBASIC3.18□□□□□ -1.9
CTHRC1Q96CG8 Y_RNA.687-201ENST00000516558 91 ntBASIC3.18□□□□□ -1.9
CTHRC1Q96CG8 AC007458.1-201ENST00000542812 373 ntBASIC3.18□□□□□ -1.9
CTHRC1Q96CG8 SNRPGP18-201ENST00000553000 214 ntBASIC3.18□□□□□ -1.9
CTHRC1Q96CG8 TRAV32-201ENST00000553993 340 ntBASIC3.18□□□□□ -1.9
CTHRC1Q96CG8 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.18□□□□□ -1.9
CTHRC1Q96CG8 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.18□□□□□ -1.9
CTHRC1Q96CG8 AC011494.1-201ENST00000596454 237 ntBASIC3.18□□□□□ -1.9
CTHRC1Q96CG8 SNRPGP17-201ENST00000603780 214 ntBASIC3.18□□□□□ -1.9
CTHRC1Q96CG8 AC008962.1-201ENST00000605729 304 ntBASIC3.18□□□□□ -1.9
CTHRC1Q96CG8 AC092608.2-201ENST00000624427 218 ntBASIC3.18□□□□□ -1.9
CTHRC1Q96CG8 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
CTHRC1Q96CG8 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CTHRC1Q96CG8 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CTHRC1Q96CG8 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.18□□□□□ -1.9
CTHRC1Q96CG8 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CTHRC1Q96CG8 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CTHRC1Q96CG8 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CTHRC1Q96CG8 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CTHRC1Q96CG8 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CTHRC1Q96CG8 SNORA70.4-201ENST00000365509 134 ntBASIC3.17□□□□□ -1.9
CTHRC1Q96CG8 RNU6-1040P-201ENST00000383974 107 ntBASIC3.17□□□□□ -1.9
CTHRC1Q96CG8 Y_RNA.404-201ENST00000383978 102 ntBASIC3.17□□□□□ -1.9
CTHRC1Q96CG8 Y_RNA.473-201ENST00000384333 102 ntBASIC3.17□□□□□ -1.9
CTHRC1Q96CG8 MIR490-201ENST00000384865 128 ntBASIC3.17□□□□□ -1.9
CTHRC1Q96CG8 SNORA75.6-201ENST00000391318 127 ntBASIC3.17□□□□□ -1.9
CTHRC1Q96CG8 AL513475.1-201ENST00000406602 315 ntBASIC3.17□□□□□ -1.9
CTHRC1Q96CG8 AC099548.1-201ENST00000421443 426 ntBASIC3.17□□□□□ -1.9
CTHRC1Q96CG8 RPL23AP82-202ENST00000427528 469 ntBASIC3.17□□□□□ -1.9
CTHRC1Q96CG8 Z82205.1-201ENST00000428456 297 ntBASIC3.17□□□□□ -1.9
CTHRC1Q96CG8 AC006946.1-201ENST00000429106 328 ntBASIC3.17□□□□□ -1.9
CTHRC1Q96CG8 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.17□□□□□ -1.9
CTHRC1Q96CG8 AC124916.1-201ENST00000444020 547 ntBASIC3.17□□□□□ -1.9
CTHRC1Q96CG8 FTH1P25-201ENST00000447665 469 ntBASIC3.17□□□□□ -1.9
CTHRC1Q96CG8 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.17□□□□□ -1.9
CTHRC1Q96CG8 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.17□□□□□ -1.9
CTHRC1Q96CG8 AC093663.1-201ENST00000497190 394 ntBASIC3.17□□□□□ -1.9
CTHRC1Q96CG8 FCF1P8-201ENST00000510322 597 ntBASIC3.17□□□□□ -1.9
CTHRC1Q96CG8 RNU6-976P-201ENST00000516086 111 ntBASIC3.17□□□□□ -1.9
CTHRC1Q96CG8 RNU6-264P-201ENST00000517134 104 ntBASIC3.17□□□□□ -1.9
CTHRC1Q96CG8 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CTHRC1Q96CG8 AC093331.1-201ENST00000521474 169 ntBASIC3.17□□□□□ -1.9
CTHRC1Q96CG8 AP004607.1-201ENST00000524456 203 ntBASIC3.17□□□□□ -1.9
CTHRC1Q96CG8 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CTHRC1Q96CG8 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.17□□□□□ -1.9
CTHRC1Q96CG8 MIR4273-201ENST00000582824 84 ntBASIC3.17□□□□□ -1.9
CTHRC1Q96CG8 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.17□□□□□ -1.9
CTHRC1Q96CG8 AC005034.5-201ENST00000604219 466 ntBASIC3.17□□□□□ -1.9
CTHRC1Q96CG8 AC011890.2-201ENST00000613393 294 ntBASIC3.17□□□□□ -1.9
CTHRC1Q96CG8 AC084757.4-201ENST00000616350 526 ntBASIC3.17□□□□□ -1.9
CTHRC1Q96CG8 AC017071.1-201ENST00000564407 2204 ntBASIC3.17□□□□□ -1.9
CTHRC1Q96CG8 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CTHRC1Q96CG8 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
CTHRC1Q96CG8 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.17□□□□□ -1.9
CTHRC1Q96CG8 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CTHRC1Q96CG8 MIR30E-201ENST00000362104 92 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 1376.3 ms