Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 IGHVIII-44-202ENST00000636235 289 ntBASIC0.72□□□□□ -2.29
CHCHD1Q96BP2 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
CHCHD1Q96BP2 MTND5P33-201ENST00000571250 1450 ntBASIC0.72□□□□□ -2.29
CHCHD1Q96BP2 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.72□□□□□ -2.29
CHCHD1Q96BP2 NF1-214ENST00000490416 1329 ntTSL 3 BASIC0.71□□□□□ -2.3
CHCHD1Q96BP2 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
CHCHD1Q96BP2 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
CHCHD1Q96BP2 RNA5SP387-201ENST00000364226 106 ntBASIC0.71□□□□□ -2.3
CHCHD1Q96BP2 RNU6-853P-201ENST00000364306 107 ntBASIC0.71□□□□□ -2.3
CHCHD1Q96BP2 SNORD114-6-201ENST00000364393 72 ntBASIC0.71□□□□□ -2.3
CHCHD1Q96BP2 Y_RNA.534-201ENST00000384599 112 ntBASIC0.71□□□□□ -2.3
CHCHD1Q96BP2 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
CHCHD1Q96BP2 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
CHCHD1Q96BP2 RNU2-23P-201ENST00000410545 195 ntBASIC0.71□□□□□ -2.3
CHCHD1Q96BP2 AC016769.2-201ENST00000414815 475 ntBASIC0.71□□□□□ -2.3
CHCHD1Q96BP2 CST2P1-201ENST00000425770 87 ntBASIC0.71□□□□□ -2.3
CHCHD1Q96BP2 AL589872.1-201ENST00000426602 288 ntBASIC0.71□□□□□ -2.3
CHCHD1Q96BP2 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.71□□□□□ -2.3
CHCHD1Q96BP2 RSL24D1P8-201ENST00000434442 492 ntBASIC0.71□□□□□ -2.3
CHCHD1Q96BP2 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
CHCHD1Q96BP2 OR2AQ1P-201ENST00000451972 200 ntBASIC0.71□□□□□ -2.3
CHCHD1Q96BP2 AC130509.1-201ENST00000464158 433 ntBASIC0.71□□□□□ -2.3
CHCHD1Q96BP2 RPL36AP21-201ENST00000490372 323 ntBASIC0.71□□□□□ -2.3
CHCHD1Q96BP2 HMGN1P13-201ENST00000505795 138 ntBASIC0.71□□□□□ -2.3
CHCHD1Q96BP2 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC0.71□□□□□ -2.3
CHCHD1Q96BP2 RNU7-40P-201ENST00000516397 64 ntBASIC0.71□□□□□ -2.3
CHCHD1Q96BP2 AC019176.1-201ENST00000518519 225 ntBASIC0.71□□□□□ -2.3
CHCHD1Q96BP2 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC0.71□□□□□ -2.3
CHCHD1Q96BP2 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.71□□□□□ -2.3
CHCHD1Q96BP2 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.71□□□□□ -2.3
CHCHD1Q96BP2 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.71□□□□□ -2.3
CHCHD1Q96BP2 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC0.71□□□□□ -2.3
CHCHD1Q96BP2 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC0.71□□□□□ -2.3
CHCHD1Q96BP2 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
CHCHD1Q96BP2 SNORD114-21-201ENST00000606412 72 ntBASIC0.71□□□□□ -2.3
CHCHD1Q96BP2 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.71□□□□□ -2.3
CHCHD1Q96BP2 AC018926.1-201ENST00000616335 435 ntBASIC0.71□□□□□ -2.3
CHCHD1Q96BP2 AC130454.1-201ENST00000622948 401 ntBASIC0.71□□□□□ -2.3
CHCHD1Q96BP2 PCMTD1P7-201ENST00000634506 357 ntBASIC0.71□□□□□ -2.3
CHCHD1Q96BP2 AL512643.1-201ENST00000635735 524 ntBASIC0.71□□□□□ -2.3
CHCHD1Q96BP2 AL391516.1-201ENST00000554380 2449 ntBASIC0.71□□□□□ -2.3
CHCHD1Q96BP2 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.7□□□□□ -2.3
CHCHD1Q96BP2 SNORD114-1-201ENST00000362705 72 ntBASIC0.7□□□□□ -2.3
CHCHD1Q96BP2 SNORD33-201ENST00000362761 85 ntBASIC0.7□□□□□ -2.3
CHCHD1Q96BP2 RNU6-942P-201ENST00000363002 107 ntBASIC0.7□□□□□ -2.3
CHCHD1Q96BP2 RNU1-22P-201ENST00000363334 158 ntBASIC0.7□□□□□ -2.3
CHCHD1Q96BP2 RNA5SP190-201ENST00000365222 118 ntBASIC0.7□□□□□ -2.3
CHCHD1Q96BP2 RNU6-26P-201ENST00000383985 107 ntBASIC0.7□□□□□ -2.3
CHCHD1Q96BP2 MIR301A-201ENST00000385261 86 ntBASIC0.7□□□□□ -2.3
CHCHD1Q96BP2 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
CHCHD1Q96BP2 RPS12P24-201ENST00000412619 387 ntBASIC0.7□□□□□ -2.3
CHCHD1Q96BP2 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.7□□□□□ -2.3
CHCHD1Q96BP2 RPL21P90-201ENST00000415692 466 ntBASIC0.7□□□□□ -2.3
CHCHD1Q96BP2 TIMM9P2-201ENST00000419324 266 ntBASIC0.7□□□□□ -2.3
CHCHD1Q96BP2 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC0.7□□□□□ -2.3
CHCHD1Q96BP2 EIF1P1-201ENST00000421436 341 ntBASIC0.7□□□□□ -2.3
CHCHD1Q96BP2 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC0.7□□□□□ -2.3
CHCHD1Q96BP2 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC0.7□□□□□ -2.3
CHCHD1Q96BP2 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
CHCHD1Q96BP2 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC0.7□□□□□ -2.3
CHCHD1Q96BP2 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.7□□□□□ -2.3
CHCHD1Q96BP2 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.7□□□□□ -2.3
CHCHD1Q96BP2 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.7□□□□□ -2.3
CHCHD1Q96BP2 CYP3A52P-201ENST00000563326 91 ntBASIC0.7□□□□□ -2.3
CHCHD1Q96BP2 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC0.7□□□□□ -2.3
CHCHD1Q96BP2 AC078795.2-201ENST00000602835 1252 ntBASIC0.7□□□□□ -2.3
CHCHD1Q96BP2 RPL21P136-201ENST00000605378 396 ntBASIC0.7□□□□□ -2.3
CHCHD1Q96BP2 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.7□□□□□ -2.3
CHCHD1Q96BP2 AL136313.1-201ENST00000624804 202 ntBASIC0.7□□□□□ -2.3
CHCHD1Q96BP2 AP003485.1-201ENST00000625093 753 ntBASIC0.7□□□□□ -2.3
CHCHD1Q96BP2 DDX43P2-201ENST00000604753 1354 ntBASIC0.7□□□□□ -2.3
CHCHD1Q96BP2 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
CHCHD1Q96BP2 RNU6-777P-201ENST00000364265 104 ntBASIC0.69□□□□□ -2.3
CHCHD1Q96BP2 RNU6-701P-201ENST00000384059 107 ntBASIC0.69□□□□□ -2.3
CHCHD1Q96BP2 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.69□□□□□ -2.3
CHCHD1Q96BP2 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
CHCHD1Q96BP2 AC083875.1-201ENST00000419509 405 ntBASIC0.69□□□□□ -2.3
CHCHD1Q96BP2 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.69□□□□□ -2.3
CHCHD1Q96BP2 AL953862.1-201ENST00000423016 168 ntBASIC0.69□□□□□ -2.3
CHCHD1Q96BP2 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
CHCHD1Q96BP2 C8orf59P1-201ENST00000429930 303 ntBASIC0.69□□□□□ -2.3
CHCHD1Q96BP2 CBX3P6-201ENST00000430257 527 ntBASIC0.69□□□□□ -2.3
CHCHD1Q96BP2 AL591704.1-201ENST00000432574 275 ntBASIC0.69□□□□□ -2.3
CHCHD1Q96BP2 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC0.69□□□□□ -2.3
CHCHD1Q96BP2 SNRPEP7-201ENST00000438350 220 ntBASIC0.69□□□□□ -2.3
CHCHD1Q96BP2 NEFMP1-201ENST00000443423 1006 ntBASIC0.69□□□□□ -2.3
CHCHD1Q96BP2 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.69□□□□□ -2.3
CHCHD1Q96BP2 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
CHCHD1Q96BP2 AC003071.1-201ENST00000451219 789 ntBASIC0.69□□□□□ -2.3
CHCHD1Q96BP2 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.69□□□□□ -2.3
CHCHD1Q96BP2 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
CHCHD1Q96BP2 SNORA3.4-201ENST00000515969 96 ntBASIC0.69□□□□□ -2.3
CHCHD1Q96BP2 RNU6-295P-201ENST00000516901 104 ntBASIC0.69□□□□□ -2.3
CHCHD1Q96BP2 RNU6-1315P-201ENST00000517187 99 ntBASIC0.69□□□□□ -2.3
CHCHD1Q96BP2 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.69□□□□□ -2.3
CHCHD1Q96BP2 AC087441.2-201ENST00000529141 262 ntBASIC0.69□□□□□ -2.3
CHCHD1Q96BP2 DEFB130C-202ENST00000530001 230 ntBASIC0.69□□□□□ -2.3
CHCHD1Q96BP2 YWHAZP1-201ENST00000556286 722 ntBASIC0.69□□□□□ -2.3
CHCHD1Q96BP2 MTATP6P25-201ENST00000574491 261 ntBASIC0.69□□□□□ -2.3
CHCHD1Q96BP2 MIR3937-201ENST00000580135 106 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms