Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 MIR4299-201ENST00000577899 72 ntBASIC0.55□□□□□ -2.32
TTC28Q96AY4 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC0.55□□□□□ -2.32
TTC28Q96AY4 AC040174.2-201ENST00000602701 465 ntBASIC0.55□□□□□ -2.32
TTC28Q96AY4 BNIP3P31-201ENST00000604515 566 ntBASIC0.55□□□□□ -2.32
TTC28Q96AY4 AC004067.1-201ENST00000608733 700 ntBASIC0.55□□□□□ -2.32
TTC28Q96AY4 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC0.55□□□□□ -2.32
TTC28Q96AY4 Y_RNA.311-201ENST00000365068 96 ntBASIC0.54□□□□□ -2.32
TTC28Q96AY4 MIR676-201ENST00000390702 67 ntBASIC0.54□□□□□ -2.32
TTC28Q96AY4 RPL22P22-201ENST00000395439 379 ntBASIC0.54□□□□□ -2.32
TTC28Q96AY4 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.54□□□□□ -2.32
TTC28Q96AY4 NDUFS5P4-201ENST00000412983 318 ntBASIC0.54□□□□□ -2.32
TTC28Q96AY4 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC0.54□□□□□ -2.32
TTC28Q96AY4 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.54□□□□□ -2.32
TTC28Q96AY4 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC0.54□□□□□ -2.32
TTC28Q96AY4 VN1R10P-201ENST00000447106 875 ntBASIC0.54□□□□□ -2.32
TTC28Q96AY4 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.54□□□□□ -2.32
TTC28Q96AY4 AL592447.1-201ENST00000447592 540 ntBASIC0.54□□□□□ -2.32
TTC28Q96AY4 HMGB1P36-201ENST00000487709 576 ntBASIC0.54□□□□□ -2.32
TTC28Q96AY4 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
TTC28Q96AY4 SNORA4.4-201ENST00000515921 135 ntBASIC0.54□□□□□ -2.32
TTC28Q96AY4 RNU6-416P-201ENST00000516265 103 ntBASIC0.54□□□□□ -2.32
TTC28Q96AY4 RNA5SP461-201ENST00000516451 104 ntBASIC0.54□□□□□ -2.32
TTC28Q96AY4 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC0.54□□□□□ -2.32
TTC28Q96AY4 AC002545.1-201ENST00000592511 181 ntBASIC0.54□□□□□ -2.32
TTC28Q96AY4 AL139344.1-201ENST00000605228 195 ntBASIC0.54□□□□□ -2.32
TTC28Q96AY4 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC0.54□□□□□ -2.32
TTC28Q96AY4 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.54□□□□□ -2.32
TTC28Q96AY4 AC079416.3-201ENST00000624479 549 ntBASIC0.54□□□□□ -2.32
TTC28Q96AY4 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC0.54□□□□□ -2.32
TTC28Q96AY4 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.54□□□□□ -2.32
TTC28Q96AY4 ANKRD26P2-201ENST00000445530 1710 ntBASIC0.54□□□□□ -2.32
TTC28Q96AY4 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
TTC28Q96AY4 RNU5A-1-201ENST00000362698 116 ntBASIC0.54□□□□□ -2.32
TTC28Q96AY4 RNU6-748P-201ENST00000384648 107 ntBASIC0.54□□□□□ -2.32
TTC28Q96AY4 MIR934-201ENST00000401241 83 ntBASIC0.54□□□□□ -2.32
TTC28Q96AY4 RNU6-77P-201ENST00000410554 91 ntBASIC0.54□□□□□ -2.32
TTC28Q96AY4 ZNF863P-201ENST00000426746 417 ntBASIC0.54□□□□□ -2.32
TTC28Q96AY4 PSMA6P3-201ENST00000428242 164 ntBASIC0.54□□□□□ -2.32
TTC28Q96AY4 NANOGP2-201ENST00000435391 727 ntBASIC0.54□□□□□ -2.32
TTC28Q96AY4 RSU1P2-202ENST00000437884 485 ntBASIC0.54□□□□□ -2.32
TTC28Q96AY4 AC245102.2-201ENST00000448956 180 ntBASIC0.54□□□□□ -2.32
TTC28Q96AY4 RNU6-1037P-201ENST00000459571 107 ntBASIC0.54□□□□□ -2.32
TTC28Q96AY4 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.54□□□□□ -2.32
TTC28Q96AY4 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC0.54□□□□□ -2.32
TTC28Q96AY4 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC0.54□□□□□ -2.32
TTC28Q96AY4 RNY1P9-201ENST00000532431 109 ntBASIC0.54□□□□□ -2.32
TTC28Q96AY4 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC0.54□□□□□ -2.32
TTC28Q96AY4 LARP7P2-201ENST00000575306 125 ntBASIC0.54□□□□□ -2.32
TTC28Q96AY4 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.54□□□□□ -2.32
TTC28Q96AY4 VN1R88P-201ENST00000596787 292 ntBASIC0.54□□□□□ -2.32
TTC28Q96AY4 AL138478.1-201ENST00000612252 832 ntBASIC0.54□□□□□ -2.32
TTC28Q96AY4 AC022202.1-201ENST00000613515 211 ntBASIC0.54□□□□□ -2.32
TTC28Q96AY4 AC011939.3-201ENST00000613686 466 ntBASIC0.54□□□□□ -2.32
TTC28Q96AY4 AC004009.2-201ENST00000623016 728 ntBASIC0.54□□□□□ -2.32
TTC28Q96AY4 Z75746.1-201ENST00000440243 2080 ntBASIC0.53□□□□□ -2.32
TTC28Q96AY4 RNU1-58P-201ENST00000362413 163 ntBASIC0.53□□□□□ -2.32
TTC28Q96AY4 RNU6-1184P-201ENST00000384588 108 ntBASIC0.53□□□□□ -2.32
TTC28Q96AY4 AL512844.2-201ENST00000433990 593 ntBASIC0.53□□□□□ -2.32
TTC28Q96AY4 AC241584.1-201ENST00000438469 1241 ntBASIC0.53□□□□□ -2.32
TTC28Q96AY4 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.53□□□□□ -2.32
TTC28Q96AY4 CR769776.1-201ENST00000441254 787 ntBASIC0.53□□□□□ -2.32
TTC28Q96AY4 AC118469.1-201ENST00000442943 488 ntBASIC0.53□□□□□ -2.32
TTC28Q96AY4 AC087884.1-201ENST00000469738 328 ntBASIC0.53□□□□□ -2.32
TTC28Q96AY4 AC048346.1-201ENST00000510247 144 ntBASIC0.53□□□□□ -2.32
TTC28Q96AY4 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.53□□□□□ -2.32
TTC28Q96AY4 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC0.53□□□□□ -2.32
TTC28Q96AY4 AC095057.3-201ENST00000567102 1157 ntBASIC0.53□□□□□ -2.32
TTC28Q96AY4 AC136932.1-201ENST00000574771 208 ntBASIC0.53□□□□□ -2.32
TTC28Q96AY4 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC0.53□□□□□ -2.32
TTC28Q96AY4 AL391813.1-201ENST00000603098 260 ntBASIC0.53□□□□□ -2.32
TTC28Q96AY4 AP003973.1-201ENST00000604639 691 ntBASIC0.53□□□□□ -2.32
TTC28Q96AY4 AC021646.1-201ENST00000605469 484 ntBASIC0.53□□□□□ -2.32
TTC28Q96AY4 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.53□□□□□ -2.32
TTC28Q96AY4 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC0.53□□□□□ -2.32
TTC28Q96AY4 AL163051.2-201ENST00000618976 735 ntBASIC0.53□□□□□ -2.32
TTC28Q96AY4 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
TTC28Q96AY4 AC005832.2-201ENST00000538921 1430 ntBASIC0.53□□□□□ -2.32
TTC28Q96AY4 AL390862.1-201ENST00000635467 1469 ntBASIC0.53□□□□□ -2.32
TTC28Q96AY4 RNU4-73P-201ENST00000363164 141 ntBASIC0.53□□□□□ -2.33
TTC28Q96AY4 SNORD118-201ENST00000363593 134 ntBASIC0.53□□□□□ -2.33
TTC28Q96AY4 RNU6-40P-201ENST00000384254 107 ntBASIC0.53□□□□□ -2.33
TTC28Q96AY4 AL133264.1-201ENST00000407157 562 ntBASIC0.53□□□□□ -2.33
TTC28Q96AY4 AC078974.1-201ENST00000411597 223 ntBASIC0.53□□□□□ -2.33
TTC28Q96AY4 AC114737.2-201ENST00000421583 173 ntBASIC0.53□□□□□ -2.33
TTC28Q96AY4 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.53□□□□□ -2.33
TTC28Q96AY4 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC0.53□□□□□ -2.33
TTC28Q96AY4 RSL24D1P8-201ENST00000434442 492 ntBASIC0.53□□□□□ -2.33
TTC28Q96AY4 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.53□□□□□ -2.33
TTC28Q96AY4 AC098862.1-201ENST00000504991 413 ntBASIC0.53□□□□□ -2.33
TTC28Q96AY4 AC005741.1-201ENST00000511094 432 ntBASIC0.53□□□□□ -2.33
TTC28Q96AY4 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC0.53□□□□□ -2.33
TTC28Q96AY4 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC0.53□□□□□ -2.33
TTC28Q96AY4 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC0.53□□□□□ -2.33
TTC28Q96AY4 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC0.53□□□□□ -2.33
TTC28Q96AY4 AL160236.1-201ENST00000556317 195 ntBASIC0.53□□□□□ -2.33
TTC28Q96AY4 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC0.53□□□□□ -2.33
TTC28Q96AY4 AC091946.2-201ENST00000606105 291 ntBASIC0.53□□□□□ -2.33
TTC28Q96AY4 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC0.53□□□□□ -2.33
TTC28Q96AY4 MIR5739-201ENST00000619803 80 ntBASIC0.53□□□□□ -2.33
TTC28Q96AY4 AC013470.4-201ENST00000619978 986 ntBASIC0.53□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms