Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 RNU1-15P-201ENST00000353977 144 ntBASIC4.3□□□□□ -1.72
SHKBP1Q8TBC3 RNU4-9P-201ENST00000364951 139 ntBASIC4.3□□□□□ -1.72
SHKBP1Q8TBC3 SNORA62.3-201ENST00000365110 153 ntBASIC4.3□□□□□ -1.72
SHKBP1Q8TBC3 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
SHKBP1Q8TBC3 RNU6-882P-201ENST00000391025 103 ntBASIC4.3□□□□□ -1.72
SHKBP1Q8TBC3 RNA5SP171-201ENST00000391071 115 ntBASIC4.3□□□□□ -1.72
SHKBP1Q8TBC3 RNU6-257P-201ENST00000410238 98 ntBASIC4.3□□□□□ -1.72
SHKBP1Q8TBC3 AC004552.1-201ENST00000419089 348 ntBASIC4.3□□□□□ -1.72
SHKBP1Q8TBC3 RPS6P12-201ENST00000432491 726 ntBASIC4.3□□□□□ -1.72
SHKBP1Q8TBC3 AC114982.1-201ENST00000469402 321 ntBASIC4.3□□□□□ -1.72
SHKBP1Q8TBC3 RPS26P3-201ENST00000470205 348 ntBASIC4.3□□□□□ -1.72
SHKBP1Q8TBC3 AC090543.2-201ENST00000483963 348 ntBASIC4.3□□□□□ -1.72
SHKBP1Q8TBC3 AC004057.1-201ENST00000485827 348 ntBASIC4.3□□□□□ -1.72
SHKBP1Q8TBC3 AC025554.1-201ENST00000505641 188 ntBASIC4.3□□□□□ -1.72
SHKBP1Q8TBC3 RNU6-919P-201ENST00000516731 104 ntBASIC4.3□□□□□ -1.72
SHKBP1Q8TBC3 AP005660.1-201ENST00000522972 293 ntBASIC4.3□□□□□ -1.72
SHKBP1Q8TBC3 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.3□□□□□ -1.72
SHKBP1Q8TBC3 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.3□□□□□ -1.72
SHKBP1Q8TBC3 RPL21P9-201ENST00000556149 474 ntBASIC4.3□□□□□ -1.72
SHKBP1Q8TBC3 CYP4A43P-201ENST00000568156 121 ntBASIC4.3□□□□□ -1.72
SHKBP1Q8TBC3 RPL23AP88-201ENST00000605759 454 ntBASIC4.3□□□□□ -1.72
SHKBP1Q8TBC3 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.3□□□□□ -1.72
SHKBP1Q8TBC3 AC112200.1-201ENST00000625015 234 ntBASIC4.3□□□□□ -1.72
SHKBP1Q8TBC3 MIR4496-201ENST00000635896 61 ntBASIC4.3□□□□□ -1.72
SHKBP1Q8TBC3 IGHVIII-44-202ENST00000636235 289 ntBASIC4.3□□□□□ -1.72
SHKBP1Q8TBC3 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
SHKBP1Q8TBC3 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.29□□□□□ -1.72
SHKBP1Q8TBC3 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
SHKBP1Q8TBC3 AC135776.4-201ENST00000624300 1904 ntBASIC4.29□□□□□ -1.72
SHKBP1Q8TBC3 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SHKBP1Q8TBC3 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SHKBP1Q8TBC3 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SHKBP1Q8TBC3 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
SHKBP1Q8TBC3 Y_RNA.136-201ENST00000363444 102 ntBASIC4.29□□□□□ -1.72
SHKBP1Q8TBC3 Y_RNA.261-201ENST00000364631 102 ntBASIC4.29□□□□□ -1.72
SHKBP1Q8TBC3 RNU6-17P-201ENST00000384245 107 ntBASIC4.29□□□□□ -1.72
SHKBP1Q8TBC3 RNU6-18P-201ENST00000384527 107 ntBASIC4.29□□□□□ -1.72
SHKBP1Q8TBC3 MIR186-201ENST00000384988 86 ntBASIC4.29□□□□□ -1.72
SHKBP1Q8TBC3 MIR1250-201ENST00000408098 113 ntBASIC4.29□□□□□ -1.72
SHKBP1Q8TBC3 Y_RNA.597-201ENST00000410463 100 ntBASIC4.29□□□□□ -1.72
SHKBP1Q8TBC3 RNA5SP306-201ENST00000411087 107 ntBASIC4.29□□□□□ -1.72
SHKBP1Q8TBC3 AL513331.1-201ENST00000411908 397 ntBASIC4.29□□□□□ -1.72
SHKBP1Q8TBC3 AP000907.1-201ENST00000428428 510 ntBASIC4.29□□□□□ -1.72
SHKBP1Q8TBC3 AC008065.1-201ENST00000428525 348 ntBASIC4.29□□□□□ -1.72
SHKBP1Q8TBC3 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.29□□□□□ -1.72
SHKBP1Q8TBC3 RPS15AP7-201ENST00000439294 405 ntBASIC4.29□□□□□ -1.72
SHKBP1Q8TBC3 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.29□□□□□ -1.72
SHKBP1Q8TBC3 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.29□□□□□ -1.72
SHKBP1Q8TBC3 RPL26P26-201ENST00000480251 434 ntBASIC4.29□□□□□ -1.72
SHKBP1Q8TBC3 RPS27P26-201ENST00000494583 239 ntBASIC4.29□□□□□ -1.72
SHKBP1Q8TBC3 AC108145.1-201ENST00000503770 153 ntBASIC4.29□□□□□ -1.72
SHKBP1Q8TBC3 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC4.29□□□□□ -1.72
SHKBP1Q8TBC3 RNU6-426P-201ENST00000516464 97 ntBASIC4.29□□□□□ -1.72
SHKBP1Q8TBC3 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.29□□□□□ -1.72
SHKBP1Q8TBC3 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.29□□□□□ -1.72
SHKBP1Q8TBC3 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC4.29□□□□□ -1.72
SHKBP1Q8TBC3 HSPE1P5-201ENST00000561489 272 ntBASIC4.29□□□□□ -1.72
SHKBP1Q8TBC3 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.29□□□□□ -1.72
SHKBP1Q8TBC3 AC067852.4-201ENST00000590314 478 ntBASIC4.29□□□□□ -1.72
SHKBP1Q8TBC3 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SHKBP1Q8TBC3 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SHKBP1Q8TBC3 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SHKBP1Q8TBC3 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
SHKBP1Q8TBC3 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.29□□□□□ -1.72
SHKBP1Q8TBC3 AC018529.3-201ENST00000624212 2254 ntBASIC4.29□□□□□ -1.72
SHKBP1Q8TBC3 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.29□□□□□ -1.72
SHKBP1Q8TBC3 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.29□□□□□ -1.72
SHKBP1Q8TBC3 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SHKBP1Q8TBC3 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SHKBP1Q8TBC3 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SHKBP1Q8TBC3 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
SHKBP1Q8TBC3 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SHKBP1Q8TBC3 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.28□□□□□ -1.72
SHKBP1Q8TBC3 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
SHKBP1Q8TBC3 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.28□□□□□ -1.72
SHKBP1Q8TBC3 RNU6-1249P-201ENST00000363237 111 ntBASIC4.28□□□□□ -1.72
SHKBP1Q8TBC3 Y_RNA.262-201ENST00000364641 102 ntBASIC4.28□□□□□ -1.72
SHKBP1Q8TBC3 MIR670-201ENST00000390142 98 ntBASIC4.28□□□□□ -1.72
SHKBP1Q8TBC3 RNA5SP213-201ENST00000391031 106 ntBASIC4.28□□□□□ -1.72
SHKBP1Q8TBC3 SNORA46.1-201ENST00000391069 153 ntBASIC4.28□□□□□ -1.72
SHKBP1Q8TBC3 SNORD12B-201ENST00000410433 91 ntBASIC4.28□□□□□ -1.72
SHKBP1Q8TBC3 AL691449.1-201ENST00000426570 421 ntBASIC4.28□□□□□ -1.72
SHKBP1Q8TBC3 TOMM20P4-201ENST00000427861 435 ntBASIC4.28□□□□□ -1.72
SHKBP1Q8TBC3 AL445584.1-201ENST00000431451 330 ntBASIC4.28□□□□□ -1.72
SHKBP1Q8TBC3 TBCAP1-201ENST00000436520 327 ntBASIC4.28□□□□□ -1.72
SHKBP1Q8TBC3 SNORD116-25-201ENST00000516517 92 ntBASIC4.28□□□□□ -1.72
SHKBP1Q8TBC3 RN7SKP272-201ENST00000516988 232 ntBASIC4.28□□□□□ -1.72
SHKBP1Q8TBC3 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
SHKBP1Q8TBC3 MIR4444-1-201ENST00000581696 74 ntBASIC4.28□□□□□ -1.72
SHKBP1Q8TBC3 MIR4444-2-201ENST00000584390 74 ntBASIC4.28□□□□□ -1.72
SHKBP1Q8TBC3 MIR5684-201ENST00000585074 65 ntBASIC4.28□□□□□ -1.72
SHKBP1Q8TBC3 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SHKBP1Q8TBC3 AC008749.1-201ENST00000597650 306 ntBASIC4.28□□□□□ -1.72
SHKBP1Q8TBC3 AL161798.1-201ENST00000604630 131 ntBASIC4.28□□□□□ -1.72
SHKBP1Q8TBC3 AC039056.2-201ENST00000622261 511 ntBASIC4.28□□□□□ -1.72
SHKBP1Q8TBC3 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
SHKBP1Q8TBC3 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SHKBP1Q8TBC3 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
SHKBP1Q8TBC3 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SHKBP1Q8TBC3 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms