Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 IGKV2-38-201ENST00000517443 247 ntBASIC3.84□□□□□ -1.79
NUP43Q8NFH3 CBX3P4-201ENST00000538909 354 ntBASIC3.84□□□□□ -1.79
NUP43Q8NFH3 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.84□□□□□ -1.79
NUP43Q8NFH3 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.84□□□□□ -1.79
NUP43Q8NFH3 MIR4782-201ENST00000577987 79 ntBASIC3.84□□□□□ -1.79
NUP43Q8NFH3 MIR3138-201ENST00000585238 82 ntBASIC3.84□□□□□ -1.79
NUP43Q8NFH3 RPL23AP88-201ENST00000605759 454 ntBASIC3.84□□□□□ -1.79
NUP43Q8NFH3 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.84□□□□□ -1.79
NUP43Q8NFH3 AC034229.5-201ENST00000624258 185 ntBASIC3.84□□□□□ -1.79
NUP43Q8NFH3 AC127459.3-201ENST00000624328 466 ntBASIC3.84□□□□□ -1.79
NUP43Q8NFH3 U6.99-201ENST00000637524 83 ntBASIC3.84□□□□□ -1.79
NUP43Q8NFH3 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
NUP43Q8NFH3 AC008568.2-201ENST00000623862 2313 ntBASIC3.84□□□□□ -1.79
NUP43Q8NFH3 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
NUP43Q8NFH3 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
NUP43Q8NFH3 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
NUP43Q8NFH3 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.84□□□□□ -1.8
NUP43Q8NFH3 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.84□□□□□ -1.8
NUP43Q8NFH3 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
NUP43Q8NFH3 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
NUP43Q8NFH3 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
NUP43Q8NFH3 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.83□□□□□ -1.8
NUP43Q8NFH3 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NUP43Q8NFH3 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
NUP43Q8NFH3 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
NUP43Q8NFH3 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.83□□□□□ -1.8
NUP43Q8NFH3 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
NUP43Q8NFH3 Y_RNA.83-201ENST00000363005 113 ntBASIC3.83□□□□□ -1.8
NUP43Q8NFH3 SNORD35B-201ENST00000363660 87 ntBASIC3.83□□□□□ -1.8
NUP43Q8NFH3 Y_RNA.464-201ENST00000384282 110 ntBASIC3.83□□□□□ -1.8
NUP43Q8NFH3 RNU6-318P-201ENST00000384283 103 ntBASIC3.83□□□□□ -1.8
NUP43Q8NFH3 U3.37-201ENST00000408528 213 ntBASIC3.83□□□□□ -1.8
NUP43Q8NFH3 AC017079.2-201ENST00000416102 485 ntBASIC3.83□□□□□ -1.8
NUP43Q8NFH3 AL445305.1-201ENST00000432577 575 ntBASIC3.83□□□□□ -1.8
NUP43Q8NFH3 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.83□□□□□ -1.8
NUP43Q8NFH3 AL451050.1-201ENST00000450126 415 ntBASIC3.83□□□□□ -1.8
NUP43Q8NFH3 AC105137.1-201ENST00000484355 562 ntBASIC3.83□□□□□ -1.8
NUP43Q8NFH3 RPL30P1-201ENST00000488676 339 ntBASIC3.83□□□□□ -1.8
NUP43Q8NFH3 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.83□□□□□ -1.8
NUP43Q8NFH3 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.83□□□□□ -1.8
NUP43Q8NFH3 AC053481.4-201ENST00000583164 216 ntBASIC3.83□□□□□ -1.8
NUP43Q8NFH3 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.83□□□□□ -1.8
NUP43Q8NFH3 AC024153.1-201ENST00000603103 365 ntBASIC3.83□□□□□ -1.8
NUP43Q8NFH3 ARF4P1-201ENST00000605447 541 ntBASIC3.83□□□□□ -1.8
NUP43Q8NFH3 BRDTP1-201ENST00000605735 677 ntBASIC3.83□□□□□ -1.8
NUP43Q8NFH3 AC097372.5-201ENST00000623665 376 ntBASIC3.83□□□□□ -1.8
NUP43Q8NFH3 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NUP43Q8NFH3 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NUP43Q8NFH3 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.83□□□□□ -1.8
NUP43Q8NFH3 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NUP43Q8NFH3 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NUP43Q8NFH3 AC016588.2-201ENST00000632484 3021 ntBASIC3.82□□□□□ -1.8
NUP43Q8NFH3 AL133412.1-201ENST00000380194 2992 ntBASIC3.82□□□□□ -1.8
NUP43Q8NFH3 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NUP43Q8NFH3 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.82□□□□□ -1.8
NUP43Q8NFH3 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.82□□□□□ -1.8
NUP43Q8NFH3 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NUP43Q8NFH3 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.82□□□□□ -1.8
NUP43Q8NFH3 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
NUP43Q8NFH3 SNORD115-32-201ENST00000364079 82 ntBASIC3.82□□□□□ -1.8
NUP43Q8NFH3 RNU1-64P-201ENST00000365443 163 ntBASIC3.82□□□□□ -1.8
NUP43Q8NFH3 SNORD63-201ENST00000384262 68 ntBASIC3.82□□□□□ -1.8
NUP43Q8NFH3 MIR518D-201ENST00000385014 87 ntBASIC3.82□□□□□ -1.8
NUP43Q8NFH3 RNA5SP213-201ENST00000391031 106 ntBASIC3.82□□□□□ -1.8
NUP43Q8NFH3 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NUP43Q8NFH3 SNORA3C-201ENST00000408792 125 ntBASIC3.82□□□□□ -1.8
NUP43Q8NFH3 AC092047.1-201ENST00000424997 240 ntBASIC3.82□□□□□ -1.8
NUP43Q8NFH3 EIF1P2-201ENST00000428233 350 ntBASIC3.82□□□□□ -1.8
NUP43Q8NFH3 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NUP43Q8NFH3 AC010469.1-201ENST00000463864 576 ntBASIC3.82□□□□□ -1.8
NUP43Q8NFH3 AC010618.1-201ENST00000469924 477 ntBASIC3.82□□□□□ -1.8
NUP43Q8NFH3 UBE2CP3-201ENST00000502715 450 ntBASIC3.82□□□□□ -1.8
NUP43Q8NFH3 Vault.1-201ENST00000516474 102 ntBASIC3.82□□□□□ -1.8
NUP43Q8NFH3 RN7SKP272-201ENST00000516988 232 ntBASIC3.82□□□□□ -1.8
NUP43Q8NFH3 RNU6-1183P-201ENST00000517054 60 ntBASIC3.82□□□□□ -1.8
NUP43Q8NFH3 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.82□□□□□ -1.8
NUP43Q8NFH3 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.82□□□□□ -1.8
NUP43Q8NFH3 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.82□□□□□ -1.8
NUP43Q8NFH3 AC025627.2-201ENST00000576220 160 ntBASIC3.82□□□□□ -1.8
NUP43Q8NFH3 MIR5684-201ENST00000585074 65 ntBASIC3.82□□□□□ -1.8
NUP43Q8NFH3 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.82□□□□□ -1.8
NUP43Q8NFH3 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.82□□□□□ -1.8
NUP43Q8NFH3 MIR8059-201ENST00000620427 81 ntBASIC3.82□□□□□ -1.8
NUP43Q8NFH3 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NUP43Q8NFH3 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
NUP43Q8NFH3 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
NUP43Q8NFH3 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.82□□□□□ -1.8
NUP43Q8NFH3 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NUP43Q8NFH3 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NUP43Q8NFH3 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NUP43Q8NFH3 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
NUP43Q8NFH3 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NUP43Q8NFH3 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.81□□□□□ -1.8
NUP43Q8NFH3 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NUP43Q8NFH3 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
NUP43Q8NFH3 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NUP43Q8NFH3 AC118273.1-201ENST00000525324 3006 ntBASIC3.81□□□□□ -1.8
NUP43Q8NFH3 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
NUP43Q8NFH3 MIR411-201ENST00000362239 96 ntBASIC3.81□□□□□ -1.8
NUP43Q8NFH3 RNU6-545P-201ENST00000362681 104 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms