Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.3□□□□□ -2.04
CCDC197Q8NCU1 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.3□□□□□ -2.04
CCDC197Q8NCU1 AC105137.2-201ENST00000569073 466 ntBASIC2.3□□□□□ -2.04
CCDC197Q8NCU1 MTCYBP33-201ENST00000575007 1130 ntBASIC2.3□□□□□ -2.04
CCDC197Q8NCU1 MIR5694-201ENST00000581190 76 ntBASIC2.3□□□□□ -2.04
CCDC197Q8NCU1 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.3□□□□□ -2.04
CCDC197Q8NCU1 AL021997.1-201ENST00000605757 193 ntBASIC2.3□□□□□ -2.04
CCDC197Q8NCU1 RNU6-91P-201ENST00000607774 107 ntBASIC2.3□□□□□ -2.04
CCDC197Q8NCU1 AC017083.3-201ENST00000609955 700 ntBASIC2.3□□□□□ -2.04
CCDC197Q8NCU1 AL731566.2-201ENST00000618971 317 ntBASIC2.3□□□□□ -2.04
CCDC197Q8NCU1 AC024581.2-201ENST00000619986 252 ntBASIC2.3□□□□□ -2.04
CCDC197Q8NCU1 AC244517.12-201ENST00000623581 663 ntBASIC2.3□□□□□ -2.04
CCDC197Q8NCU1 MTND4P1-201ENST00000457501 1466 ntBASIC2.3□□□□□ -2.04
CCDC197Q8NCU1 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.3□□□□□ -2.04
CCDC197Q8NCU1 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.3□□□□□ -2.04
CCDC197Q8NCU1 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CCDC197Q8NCU1 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.29□□□□□ -2.04
CCDC197Q8NCU1 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.29□□□□□ -2.04
CCDC197Q8NCU1 AC006020.1-201ENST00000420179 1854 ntBASIC2.29□□□□□ -2.04
CCDC197Q8NCU1 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.29□□□□□ -2.04
CCDC197Q8NCU1 RNU6-486P-201ENST00000363116 107 ntBASIC2.29□□□□□ -2.04
CCDC197Q8NCU1 RNU4-75P-201ENST00000364621 146 ntBASIC2.29□□□□□ -2.04
CCDC197Q8NCU1 RNU6-996P-201ENST00000365438 107 ntBASIC2.29□□□□□ -2.04
CCDC197Q8NCU1 Y_RNA.436-201ENST00000384097 102 ntBASIC2.29□□□□□ -2.04
CCDC197Q8NCU1 RNU1-52P-201ENST00000384190 164 ntBASIC2.29□□□□□ -2.04
CCDC197Q8NCU1 SNORA16.2-201ENST00000390991 127 ntBASIC2.29□□□□□ -2.04
CCDC197Q8NCU1 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.29□□□□□ -2.04
CCDC197Q8NCU1 MTCYBP8-201ENST00000422855 651 ntBASIC2.29□□□□□ -2.04
CCDC197Q8NCU1 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.29□□□□□ -2.04
CCDC197Q8NCU1 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.29□□□□□ -2.04
CCDC197Q8NCU1 AC073415.1-201ENST00000449240 153 ntBASIC2.29□□□□□ -2.04
CCDC197Q8NCU1 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.29□□□□□ -2.04
CCDC197Q8NCU1 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.29□□□□□ -2.04
CCDC197Q8NCU1 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.29□□□□□ -2.04
CCDC197Q8NCU1 RN7SL807P-201ENST00000470923 297 ntBASIC2.29□□□□□ -2.04
CCDC197Q8NCU1 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.29□□□□□ -2.04
CCDC197Q8NCU1 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.29□□□□□ -2.04
CCDC197Q8NCU1 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.29□□□□□ -2.04
CCDC197Q8NCU1 AC074344.1-201ENST00000512823 224 ntBASIC2.29□□□□□ -2.04
CCDC197Q8NCU1 AC114781.4-201ENST00000513707 639 ntBASIC2.29□□□□□ -2.04
CCDC197Q8NCU1 RNA5SP112-201ENST00000515937 99 ntBASIC2.29□□□□□ -2.04
CCDC197Q8NCU1 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.29□□□□□ -2.04
CCDC197Q8NCU1 AP003034.1-201ENST00000534621 422 ntBASIC2.29□□□□□ -2.04
CCDC197Q8NCU1 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.29□□□□□ -2.04
CCDC197Q8NCU1 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.29□□□□□ -2.04
CCDC197Q8NCU1 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.29□□□□□ -2.04
CCDC197Q8NCU1 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.29□□□□□ -2.04
CCDC197Q8NCU1 BNIP3P30-201ENST00000601184 574 ntBASIC2.29□□□□□ -2.04
CCDC197Q8NCU1 AL121917.1-203ENST00000605534 577 ntBASIC2.29□□□□□ -2.04
CCDC197Q8NCU1 AP001330.5-201ENST00000607176 411 ntBASIC2.29□□□□□ -2.04
CCDC197Q8NCU1 HMGB1P24-202ENST00000615653 685 ntBASIC2.29□□□□□ -2.04
CCDC197Q8NCU1 AL031601.2-202ENST00000622650 282 ntBASIC2.29□□□□□ -2.04
CCDC197Q8NCU1 OR5AK4P-201ENST00000635912 903 ntBASIC2.29□□□□□ -2.04
CCDC197Q8NCU1 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
CCDC197Q8NCU1 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.29□□□□□ -2.04
CCDC197Q8NCU1 AL354685.2-201ENST00000448218 1447 ntBASIC2.28□□□□□ -2.04
CCDC197Q8NCU1 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CCDC197Q8NCU1 RNU6-858P-201ENST00000362436 107 ntBASIC2.28□□□□□ -2.04
CCDC197Q8NCU1 RNA5SP374-201ENST00000362939 125 ntBASIC2.28□□□□□ -2.04
CCDC197Q8NCU1 RNU6-1303P-201ENST00000364841 107 ntBASIC2.28□□□□□ -2.04
CCDC197Q8NCU1 RNA5SP479-201ENST00000364858 117 ntBASIC2.28□□□□□ -2.04
CCDC197Q8NCU1 Y_RNA.381-201ENST00000365666 102 ntBASIC2.28□□□□□ -2.04
CCDC197Q8NCU1 MIR218-1-201ENST00000384999 110 ntBASIC2.28□□□□□ -2.04
CCDC197Q8NCU1 MIR27B-201ENST00000385129 97 ntBASIC2.28□□□□□ -2.04
CCDC197Q8NCU1 AL133475.1-201ENST00000404414 305 ntBASIC2.28□□□□□ -2.04
CCDC197Q8NCU1 U6atac.2-201ENST00000408644 118 ntBASIC2.28□□□□□ -2.04
CCDC197Q8NCU1 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.28□□□□□ -2.04
CCDC197Q8NCU1 BX276092.3-201ENST00000424182 230 ntBASIC2.28□□□□□ -2.04
CCDC197Q8NCU1 RPL35AP12-201ENST00000425362 338 ntBASIC2.28□□□□□ -2.04
CCDC197Q8NCU1 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC197Q8NCU1 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC197Q8NCU1 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC197Q8NCU1 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.28□□□□□ -2.04
CCDC197Q8NCU1 SCARNA18-201ENST00000459004 134 ntBASIC2.28□□□□□ -2.04
CCDC197Q8NCU1 AC080013.2-201ENST00000460866 323 ntBASIC2.28□□□□□ -2.04
CCDC197Q8NCU1 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
CCDC197Q8NCU1 LRRC34P2-201ENST00000514850 553 ntBASIC2.28□□□□□ -2.04
CCDC197Q8NCU1 RNU2-69P-201ENST00000516061 100 ntBASIC2.28□□□□□ -2.04
CCDC197Q8NCU1 SNORA40.12-201ENST00000516329 111 ntBASIC2.28□□□□□ -2.04
CCDC197Q8NCU1 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC197Q8NCU1 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.28□□□□□ -2.04
CCDC197Q8NCU1 AC010186.2-204ENST00000537668 439 ntBASIC2.28□□□□□ -2.04
CCDC197Q8NCU1 AC079598.5-201ENST00000547460 117 ntBASIC2.28□□□□□ -2.04
CCDC197Q8NCU1 CR383656.8-201ENST00000549046 145 ntBASIC2.28□□□□□ -2.04
CCDC197Q8NCU1 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.28□□□□□ -2.04
CCDC197Q8NCU1 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.28□□□□□ -2.04
CCDC197Q8NCU1 HIF1AP1-201ENST00000553642 175 ntBASIC2.28□□□□□ -2.04
CCDC197Q8NCU1 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.28□□□□□ -2.04
CCDC197Q8NCU1 MTCO3P23-201ENST00000561363 289 ntBASIC2.28□□□□□ -2.04
CCDC197Q8NCU1 AC105245.1-201ENST00000581934 244 ntBASIC2.28□□□□□ -2.04
CCDC197Q8NCU1 AC103987.3-201ENST00000582071 292 ntBASIC2.28□□□□□ -2.04
CCDC197Q8NCU1 AC012507.3-201ENST00000603556 477 ntBASIC2.28□□□□□ -2.04
CCDC197Q8NCU1 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.28□□□□□ -2.04
CCDC197Q8NCU1 RMST_7.1-201ENST00000621935 268 ntBASIC2.28□□□□□ -2.04
CCDC197Q8NCU1 AC022418.1-201ENST00000624118 445 ntBASIC2.28□□□□□ -2.04
CCDC197Q8NCU1 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CCDC197Q8NCU1 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.27□□□□□ -2.05
CCDC197Q8NCU1 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CCDC197Q8NCU1 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CCDC197Q8NCU1 RBBP8P1-201ENST00000449447 1844 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms