Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 RPL7AP25-201ENST00000423357 805 ntBASIC4.89□□□□□ -1.63
RNF135Q8IUD6 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.89□□□□□ -1.63
RNF135Q8IUD6 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.89□□□□□ -1.63
RNF135Q8IUD6 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.89□□□□□ -1.63
RNF135Q8IUD6 RN7SL558P-201ENST00000497468 299 ntBASIC4.89□□□□□ -1.63
RNF135Q8IUD6 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.89□□□□□ -1.63
RNF135Q8IUD6 RNA5SP315-201ENST00000516340 116 ntBASIC4.89□□□□□ -1.63
RNF135Q8IUD6 RNU6-919P-201ENST00000516731 104 ntBASIC4.89□□□□□ -1.63
RNF135Q8IUD6 RNA5SP312-201ENST00000517068 116 ntBASIC4.89□□□□□ -1.63
RNF135Q8IUD6 RNU6-58P-201ENST00000517143 103 ntBASIC4.89□□□□□ -1.63
RNF135Q8IUD6 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.89□□□□□ -1.63
RNF135Q8IUD6 CR383656.8-201ENST00000549046 145 ntBASIC4.89□□□□□ -1.63
RNF135Q8IUD6 MIR5571-201ENST00000577998 113 ntBASIC4.89□□□□□ -1.63
RNF135Q8IUD6 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.89□□□□□ -1.63
RNF135Q8IUD6 AC008749.1-201ENST00000597650 306 ntBASIC4.89□□□□□ -1.63
RNF135Q8IUD6 AL591034.3-201ENST00000605511 685 ntBASIC4.89□□□□□ -1.63
RNF135Q8IUD6 LINC00901.1-201ENST00000617252 152 ntBASIC4.89□□□□□ -1.63
RNF135Q8IUD6 MIR6075-201ENST00000620782 95 ntBASIC4.89□□□□□ -1.63
RNF135Q8IUD6 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.89□□□□□ -1.63
RNF135Q8IUD6 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.89□□□□□ -1.63
RNF135Q8IUD6 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.89□□□□□ -1.63
RNF135Q8IUD6 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.89□□□□□ -1.63
RNF135Q8IUD6 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
RNF135Q8IUD6 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RNF135Q8IUD6 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
RNF135Q8IUD6 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.88□□□□□ -1.63
RNF135Q8IUD6 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.88□□□□□ -1.63
RNF135Q8IUD6 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
RNF135Q8IUD6 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RNF135Q8IUD6 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
RNF135Q8IUD6 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RNF135Q8IUD6 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RNF135Q8IUD6 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.88□□□□□ -1.63
RNF135Q8IUD6 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RNF135Q8IUD6 MIR410-201ENST00000362222 80 ntBASIC4.88□□□□□ -1.63
RNF135Q8IUD6 SNORA71.2-201ENST00000364941 134 ntBASIC4.88□□□□□ -1.63
RNF135Q8IUD6 RNU6-1175P-201ENST00000365200 107 ntBASIC4.88□□□□□ -1.63
RNF135Q8IUD6 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
RNF135Q8IUD6 Y_RNA.446-201ENST00000384178 104 ntBASIC4.88□□□□□ -1.63
RNF135Q8IUD6 MIR554-201ENST00000384874 96 ntBASIC4.88□□□□□ -1.63
RNF135Q8IUD6 SNORA46.1-201ENST00000391069 153 ntBASIC4.88□□□□□ -1.63
RNF135Q8IUD6 SNORA11.2-201ENST00000408318 127 ntBASIC4.88□□□□□ -1.63
RNF135Q8IUD6 RNU6-628P-201ENST00000410675 107 ntBASIC4.88□□□□□ -1.63
RNF135Q8IUD6 AC074117.2-201ENST00000417130 397 ntBASIC4.88□□□□□ -1.63
RNF135Q8IUD6 AL645608.4-201ENST00000423619 154 ntBASIC4.88□□□□□ -1.63
RNF135Q8IUD6 SNRPGP7-201ENST00000469016 106 ntBASIC4.88□□□□□ -1.63
RNF135Q8IUD6 RN7SL132P-201ENST00000478131 296 ntBASIC4.88□□□□□ -1.63
RNF135Q8IUD6 AC005921.1-201ENST00000510589 286 ntBASIC4.88□□□□□ -1.63
RNF135Q8IUD6 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.88□□□□□ -1.63
RNF135Q8IUD6 RNU6-1198P-201ENST00000516904 67 ntBASIC4.88□□□□□ -1.63
RNF135Q8IUD6 HSPE1P4-201ENST00000550617 308 ntBASIC4.88□□□□□ -1.63
RNF135Q8IUD6 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC4.88□□□□□ -1.63
RNF135Q8IUD6 AL391261.3-201ENST00000557194 520 ntBASIC4.88□□□□□ -1.63
RNF135Q8IUD6 HSPE1P5-201ENST00000561489 272 ntBASIC4.88□□□□□ -1.63
RNF135Q8IUD6 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RNF135Q8IUD6 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC4.88□□□□□ -1.63
RNF135Q8IUD6 AC084757.4-201ENST00000616350 526 ntBASIC4.88□□□□□ -1.63
RNF135Q8IUD6 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.88□□□□□ -1.63
RNF135Q8IUD6 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RNF135Q8IUD6 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.88□□□□□ -1.63
RNF135Q8IUD6 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.88□□□□□ -1.63
RNF135Q8IUD6 AC022336.2-201ENST00000568966 2538 ntBASIC4.88□□□□□ -1.63
RNF135Q8IUD6 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
RNF135Q8IUD6 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RNF135Q8IUD6 ZNF137P-201ENST00000456718 1920 ntBASIC4.87□□□□□ -1.63
RNF135Q8IUD6 AC135776.4-201ENST00000624300 1904 ntBASIC4.87□□□□□ -1.63
RNF135Q8IUD6 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RNF135Q8IUD6 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
RNF135Q8IUD6 TLK1P1-201ENST00000456760 2440 ntBASIC4.87□□□□□ -1.63
RNF135Q8IUD6 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.87□□□□□ -1.63
RNF135Q8IUD6 AC100821.1-201ENST00000523153 2479 ntBASIC4.87□□□□□ -1.63
RNF135Q8IUD6 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
RNF135Q8IUD6 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.87□□□□□ -1.63
RNF135Q8IUD6 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.87□□□□□ -1.63
RNF135Q8IUD6 RNU6-961P-201ENST00000363893 105 ntBASIC4.87□□□□□ -1.63
RNF135Q8IUD6 RNU6-449P-201ENST00000383914 107 ntBASIC4.87□□□□□ -1.63
RNF135Q8IUD6 RNU6-1145P-201ENST00000384246 107 ntBASIC4.87□□□□□ -1.63
RNF135Q8IUD6 RNU6-1289P-201ENST00000384431 106 ntBASIC4.87□□□□□ -1.63
RNF135Q8IUD6 MIR487A-201ENST00000385009 80 ntBASIC4.87□□□□□ -1.63
RNF135Q8IUD6 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
RNF135Q8IUD6 AL590762.2-201ENST00000395798 571 ntBASIC4.87□□□□□ -1.63
RNF135Q8IUD6 Y_RNA.597-201ENST00000410463 100 ntBASIC4.87□□□□□ -1.63
RNF135Q8IUD6 RPL23AP26-201ENST00000412728 464 ntBASIC4.87□□□□□ -1.63
RNF135Q8IUD6 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.87□□□□□ -1.63
RNF135Q8IUD6 GPM6BP3-201ENST00000442797 145 ntBASIC4.87□□□□□ -1.63
RNF135Q8IUD6 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.87□□□□□ -1.63
RNF135Q8IUD6 AC125238.1-201ENST00000448842 249 ntBASIC4.87□□□□□ -1.63
RNF135Q8IUD6 SNORD2.1-201ENST00000458762 69 ntBASIC4.87□□□□□ -1.63
RNF135Q8IUD6 AC114982.1-201ENST00000469402 321 ntBASIC4.87□□□□□ -1.63
RNF135Q8IUD6 UQCRHP4-201ENST00000471686 272 ntBASIC4.87□□□□□ -1.63
RNF135Q8IUD6 AP001025.1-201ENST00000486139 332 ntBASIC4.87□□□□□ -1.63
RNF135Q8IUD6 RN7SL810P-201ENST00000493031 276 ntBASIC4.87□□□□□ -1.63
RNF135Q8IUD6 RPS27P26-201ENST00000494583 239 ntBASIC4.87□□□□□ -1.63
RNF135Q8IUD6 SNORA27.4-201ENST00000516650 95 ntBASIC4.87□□□□□ -1.63
RNF135Q8IUD6 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC4.87□□□□□ -1.63
RNF135Q8IUD6 AP003730.1-201ENST00000524605 285 ntBASIC4.87□□□□□ -1.63
RNF135Q8IUD6 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.87□□□□□ -1.63
RNF135Q8IUD6 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC4.87□□□□□ -1.63
RNF135Q8IUD6 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.87□□□□□ -1.63
RNF135Q8IUD6 RN7SL176P-201ENST00000580352 264 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms