Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.02□□□□□ -2.41
VPS13BQ7Z7G8 AL136520.1-202ENST00000555494 763 ntBASIC0.02□□□□□ -2.41
VPS13BQ7Z7G8 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC0.02□□□□□ -2.41
VPS13BQ7Z7G8 AP001180.6-201ENST00000584918 159 ntBASIC0.02□□□□□ -2.41
VPS13BQ7Z7G8 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.02□□□□□ -2.41
VPS13BQ7Z7G8 Y_RNA.185-201ENST00000363894 100 ntBASIC0.01□□□□□ -2.41
VPS13BQ7Z7G8 RNU4-12P-201ENST00000365233 139 ntBASIC0.01□□□□□ -2.41
VPS13BQ7Z7G8 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.01□□□□□ -2.41
VPS13BQ7Z7G8 BET1P1-201ENST00000482276 359 ntBASIC0.01□□□□□ -2.41
VPS13BQ7Z7G8 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.01□□□□□ -2.41
VPS13BQ7Z7G8 MIR5093-201ENST00000583199 100 ntBASIC0.01□□□□□ -2.41
VPS13BQ7Z7G8 AC073544.2-201ENST00000601155 540 ntBASIC0.01□□□□□ -2.41
VPS13BQ7Z7G8 AP003973.1-201ENST00000604639 691 ntBASIC0.01□□□□□ -2.41
VPS13BQ7Z7G8 MIR4315-1-201ENST00000636800 73 ntBASIC0.01□□□□□ -2.41
VPS13BQ7Z7G8 MIR4315-2-201ENST00000640925 73 ntBASIC0.01□□□□□ -2.41
VPS13BQ7Z7G8 Z75746.1-201ENST00000440243 2080 ntBASIC0.01□□□□□ -2.41
VPS13BQ7Z7G8 RNU6-989P-201ENST00000362756 107 ntBASIC0.01□□□□□ -2.41
VPS13BQ7Z7G8 SNORD1A-201ENST00000364968 72 ntBASIC0.01□□□□□ -2.41
VPS13BQ7Z7G8 Y_RNA.514-201ENST00000384528 112 ntBASIC0.01□□□□□ -2.41
VPS13BQ7Z7G8 RPS26P5-201ENST00000418544 335 ntBASIC0.01□□□□□ -2.41
VPS13BQ7Z7G8 IGKV1-22-201ENST00000524313 326 ntBASIC0.01□□□□□ -2.41
VPS13BQ7Z7G8 AC100812.1-201ENST00000607622 580 ntBASIC0.01□□□□□ -2.41
VPS13BQ7Z7G8 Pinc.1-201ENST00000616452 154 ntBASIC0.01□□□□□ -2.41
VPS13BQ7Z7G8 uc_338.17-201ENST00000619633 179 ntBASIC0.01□□□□□ -2.41
VPS13BQ7Z7G8 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.01□□□□□ -2.41
VPS13BQ7Z7G8 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.01□□□□□ -2.41
VPS13BQ7Z7G8 RNA5SP214-201ENST00000363378 118 ntBASIC0.01□□□□□ -2.41
VPS13BQ7Z7G8 PTGES3P4-201ENST00000426243 356 ntBASIC0.01□□□□□ -2.41
VPS13BQ7Z7G8 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC0.01□□□□□ -2.41
VPS13BQ7Z7G8 SCARNA16.5-201ENST00000517114 183 ntBASIC0.01□□□□□ -2.41
VPS13BQ7Z7G8 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.01□□□□□ -2.41
VPS13BQ7Z7G8 AC002545.1-201ENST00000592511 181 ntBASIC0.01□□□□□ -2.41
VPS13BQ7Z7G8 MIR424-201ENST00000362227 98 ntBASIC0□□□□□ -2.41
VPS13BQ7Z7G8 RNU6-654P-201ENST00000364373 107 ntBASIC0□□□□□ -2.41
VPS13BQ7Z7G8 RNU6-1327P-201ENST00000365302 105 ntBASIC0□□□□□ -2.41
VPS13BQ7Z7G8 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC0□□□□□ -2.41
VPS13BQ7Z7G8 AC104417.1-201ENST00000523974 751 ntBASIC0□□□□□ -2.41
VPS13BQ7Z7G8 AC092470.1-201ENST00000546187 132 ntBASIC0□□□□□ -2.41
VPS13BQ7Z7G8 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0□□□□□ -2.41
VPS13BQ7Z7G8 AC008121.1-201ENST00000603244 268 ntBASIC0□□□□□ -2.41
VPS13BQ7Z7G8 AC009950.2-201ENST00000636548 183 ntBASIC0□□□□□ -2.41
VPS13BQ7Z7G8 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC0□□□□□ -2.41
VPS13BQ7Z7G8 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0□□□□□ -2.41
VPS13BQ7Z7G8 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0□□□□□ -2.41
VPS13BQ7Z7G8 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0□□□□□ -2.41
VPS13BQ7Z7G8 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0□□□□□ -2.41
VPS13BQ7Z7G8 AC013468.1-201ENST00000608680 598 ntBASIC0□□□□□ -2.41
VPS13BQ7Z7G8 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0□□□□□ -2.41
VPS13BQ7Z7G8 AL158163.2-201ENST00000619110 700 ntBASIC0□□□□□ -2.41
VPS13BQ7Z7G8 AL049737.1-201ENST00000413920 1403 ntBASIC-0□□□□□ -2.41
VPS13BQ7Z7G8 MIR200A-201ENST00000384875 90 ntBASIC-0□□□□□ -2.41
VPS13BQ7Z7G8 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC-0□□□□□ -2.41
VPS13BQ7Z7G8 TAF9BP2-201ENST00000400856 499 ntBASIC-0□□□□□ -2.41
VPS13BQ7Z7G8 snoU13.11-201ENST00000459219 104 ntBASIC-0□□□□□ -2.41
VPS13BQ7Z7G8 RAP1BP2-201ENST00000478270 544 ntBASIC-0□□□□□ -2.41
VPS13BQ7Z7G8 SNORA4.4-201ENST00000515921 135 ntBASIC-0□□□□□ -2.41
VPS13BQ7Z7G8 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC-0□□□□□ -2.41
VPS13BQ7Z7G8 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC-0□□□□□ -2.41
VPS13BQ7Z7G8 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC-0□□□□□ -2.41
VPS13BQ7Z7G8 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.01□□□□□ -2.41
VPS13BQ7Z7G8 Y_RNA.453-201ENST00000384223 109 ntBASIC-0.01□□□□□ -2.41
VPS13BQ7Z7G8 MIR604-201ENST00000384880 94 ntBASIC-0.01□□□□□ -2.41
VPS13BQ7Z7G8 ISCA1P1-201ENST00000426679 387 ntBASIC-0.01□□□□□ -2.41
VPS13BQ7Z7G8 HMGN2P22-201ENST00000427588 175 ntBASIC-0.01□□□□□ -2.41
VPS13BQ7Z7G8 MTCO2P20-201ENST00000437339 673 ntBASIC-0.01□□□□□ -2.41
VPS13BQ7Z7G8 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.01□□□□□ -2.41
VPS13BQ7Z7G8 AC087481.2-201ENST00000565492 330 ntBASIC-0.01□□□□□ -2.41
VPS13BQ7Z7G8 AL158211.1-201ENST00000566763 763 ntBASIC-0.01□□□□□ -2.41
VPS13BQ7Z7G8 AC092953.2-201ENST00000608000 699 ntBASIC-0.01□□□□□ -2.41
VPS13BQ7Z7G8 AP000238.1-201ENST00000608759 426 ntBASIC-0.01□□□□□ -2.41
VPS13BQ7Z7G8 MIR6134-201ENST00000617606 109 ntBASIC-0.01□□□□□ -2.41
VPS13BQ7Z7G8 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC-0.01□□□□□ -2.41
VPS13BQ7Z7G8 RNA5SP255-201ENST00000516370 107 ntBASIC-0.01□□□□□ -2.41
VPS13BQ7Z7G8 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC-0.01□□□□□ -2.41
VPS13BQ7Z7G8 ANKRD36BP2-206ENST00000575193 1245 ntBASIC-0.01□□□□□ -2.41
VPS13BQ7Z7G8 MIR378F-201ENST00000578143 78 ntBASIC-0.01□□□□□ -2.41
VPS13BQ7Z7G8 AC115085.1-201ENST00000588924 229 ntBASIC-0.01□□□□□ -2.41
VPS13BQ7Z7G8 AC015849.6-201ENST00000605454 474 ntBASIC-0.01□□□□□ -2.41
VPS13BQ7Z7G8 SNORA4.1-201ENST00000364263 144 ntBASIC-0.01□□□□□ -2.41
VPS13BQ7Z7G8 RNU6-360P-201ENST00000390944 104 ntBASIC-0.01□□□□□ -2.41
VPS13BQ7Z7G8 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC-0.01□□□□□ -2.41
VPS13BQ7Z7G8 PNRC2P1-201ENST00000423940 420 ntBASIC-0.01□□□□□ -2.41
VPS13BQ7Z7G8 AC092423.1-201ENST00000430165 186 ntBASIC-0.01□□□□□ -2.41
VPS13BQ7Z7G8 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC-0.01□□□□□ -2.41
VPS13BQ7Z7G8 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC-0.01□□□□□ -2.41
VPS13BQ7Z7G8 HMGN1P13-201ENST00000505795 138 ntBASIC-0.01□□□□□ -2.41
VPS13BQ7Z7G8 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC-0.01□□□□□ -2.41
VPS13BQ7Z7G8 SCARNA3-201ENST00000517097 143 ntBASIC-0.01□□□□□ -2.41
VPS13BQ7Z7G8 OR5AK1P-201ENST00000524837 922 ntBASIC-0.01□□□□□ -2.41
VPS13BQ7Z7G8 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC-0.01□□□□□ -2.41
VPS13BQ7Z7G8 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC-0.01□□□□□ -2.41
VPS13BQ7Z7G8 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC-0.01□□□□□ -2.41
VPS13BQ7Z7G8 RNU6-1293P-201ENST00000384077 107 ntBASIC-0.02□□□□□ -2.41
VPS13BQ7Z7G8 RNY3P5-201ENST00000384127 102 ntBASIC-0.02□□□□□ -2.41
VPS13BQ7Z7G8 SNORD89-201ENST00000390981 114 ntBASIC-0.02□□□□□ -2.41
VPS13BQ7Z7G8 RNU2-21P-201ENST00000410368 188 ntBASIC-0.02□□□□□ -2.41
VPS13BQ7Z7G8 PAXBP1P1-201ENST00000449315 447 ntBASIC-0.02□□□□□ -2.41
VPS13BQ7Z7G8 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC-0.02□□□□□ -2.41
VPS13BQ7Z7G8 RN7SKP12-201ENST00000516275 143 ntBASIC-0.02□□□□□ -2.41
VPS13BQ7Z7G8 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC-0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms