Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 MIR208A-201ENST00000362287 71 ntBASIC5.08□□□□□ -1.6
SH3RF1Q7Z6J0 RNA5SP197-201ENST00000363357 119 ntBASIC5.08□□□□□ -1.6
SH3RF1Q7Z6J0 RNU6-151P-201ENST00000364158 107 ntBASIC5.08□□□□□ -1.6
SH3RF1Q7Z6J0 RNU4-84P-201ENST00000364200 139 ntBASIC5.08□□□□□ -1.6
SH3RF1Q7Z6J0 Y_RNA.238-201ENST00000364441 102 ntBASIC5.08□□□□□ -1.6
SH3RF1Q7Z6J0 RNA5SP267-201ENST00000364893 126 ntBASIC5.08□□□□□ -1.6
SH3RF1Q7Z6J0 RNU6-213P-201ENST00000384051 104 ntBASIC5.08□□□□□ -1.6
SH3RF1Q7Z6J0 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC5.08□□□□□ -1.6
SH3RF1Q7Z6J0 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.08□□□□□ -1.6
SH3RF1Q7Z6J0 TBCAP1-201ENST00000436520 327 ntBASIC5.08□□□□□ -1.6
SH3RF1Q7Z6J0 RPL23AP93-201ENST00000440847 484 ntBASIC5.08□□□□□ -1.6
SH3RF1Q7Z6J0 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC5.08□□□□□ -1.6
SH3RF1Q7Z6J0 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SH3RF1Q7Z6J0 RNU6-971P-201ENST00000516920 106 ntBASIC5.08□□□□□ -1.6
SH3RF1Q7Z6J0 AC091905.2-201ENST00000623143 306 ntBASIC5.08□□□□□ -1.6
SH3RF1Q7Z6J0 snoU18.1-201ENST00000629629 71 ntBASIC5.08□□□□□ -1.6
SH3RF1Q7Z6J0 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC5.08□□□□□ -1.6
SH3RF1Q7Z6J0 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
SH3RF1Q7Z6J0 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SH3RF1Q7Z6J0 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SH3RF1Q7Z6J0 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SH3RF1Q7Z6J0 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SH3RF1Q7Z6J0 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SH3RF1Q7Z6J0 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
SH3RF1Q7Z6J0 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
SH3RF1Q7Z6J0 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.07□□□□□ -1.6
SH3RF1Q7Z6J0 SNORA63.4-201ENST00000362763 126 ntBASIC5.07□□□□□ -1.6
SH3RF1Q7Z6J0 RNU5F-3P-201ENST00000363767 117 ntBASIC5.07□□□□□ -1.6
SH3RF1Q7Z6J0 RNA5SP283-201ENST00000365604 119 ntBASIC5.07□□□□□ -1.6
SH3RF1Q7Z6J0 RNU1-63P-201ENST00000383902 164 ntBASIC5.07□□□□□ -1.6
SH3RF1Q7Z6J0 Y_RNA.595-201ENST00000410403 105 ntBASIC5.07□□□□□ -1.6
SH3RF1Q7Z6J0 PTGES3P4-201ENST00000426243 356 ntBASIC5.07□□□□□ -1.6
SH3RF1Q7Z6J0 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC5.07□□□□□ -1.6
SH3RF1Q7Z6J0 SEPT7P4-201ENST00000437076 306 ntBASIC5.07□□□□□ -1.6
SH3RF1Q7Z6J0 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC5.07□□□□□ -1.6
SH3RF1Q7Z6J0 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.07□□□□□ -1.6
SH3RF1Q7Z6J0 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.07□□□□□ -1.6
SH3RF1Q7Z6J0 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC5.07□□□□□ -1.6
SH3RF1Q7Z6J0 AP004371.1-201ENST00000525240 214 ntBASIC5.07□□□□□ -1.6
SH3RF1Q7Z6J0 AP002001.1-203ENST00000534002 267 ntBASIC5.07□□□□□ -1.6
SH3RF1Q7Z6J0 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.07□□□□□ -1.6
SH3RF1Q7Z6J0 AC055872.1-201ENST00000570978 278 ntBASIC5.07□□□□□ -1.6
SH3RF1Q7Z6J0 AL356157.2-201ENST00000605122 111 ntBASIC5.07□□□□□ -1.6
SH3RF1Q7Z6J0 AC022441.3-201ENST00000605737 136 ntBASIC5.07□□□□□ -1.6
SH3RF1Q7Z6J0 MIR6891-201ENST00000618788 93 ntBASIC5.07□□□□□ -1.6
SH3RF1Q7Z6J0 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SH3RF1Q7Z6J0 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SH3RF1Q7Z6J0 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SH3RF1Q7Z6J0 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SH3RF1Q7Z6J0 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.07□□□□□ -1.6
SH3RF1Q7Z6J0 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC5.07□□□□□ -1.6
SH3RF1Q7Z6J0 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SH3RF1Q7Z6J0 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SH3RF1Q7Z6J0 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
SH3RF1Q7Z6J0 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SH3RF1Q7Z6J0 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SH3RF1Q7Z6J0 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.06□□□□□ -1.6
SH3RF1Q7Z6J0 MAPK10-303ENST00000641324 3959 ntBASIC5.06□□□□□ -1.6
SH3RF1Q7Z6J0 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SH3RF1Q7Z6J0 AC018529.3-201ENST00000624212 2254 ntBASIC5.06□□□□□ -1.6
SH3RF1Q7Z6J0 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SH3RF1Q7Z6J0 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SH3RF1Q7Z6J0 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SH3RF1Q7Z6J0 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
SH3RF1Q7Z6J0 FTLP6-201ENST00000355274 422 ntBASIC5.06□□□□□ -1.6
SH3RF1Q7Z6J0 Y_RNA.182-201ENST00000363880 111 ntBASIC5.06□□□□□ -1.6
SH3RF1Q7Z6J0 RNU1-132P-201ENST00000364300 164 ntBASIC5.06□□□□□ -1.6
SH3RF1Q7Z6J0 SDHCP2-201ENST00000398565 501 ntBASIC5.06□□□□□ -1.6
SH3RF1Q7Z6J0 Z98745.1-201ENST00000402553 494 ntBASIC5.06□□□□□ -1.6
SH3RF1Q7Z6J0 PPIAP31-201ENST00000405422 495 ntBASIC5.06□□□□□ -1.6
SH3RF1Q7Z6J0 HDGFP1-201ENST00000405943 252 ntBASIC5.06□□□□□ -1.6
SH3RF1Q7Z6J0 RNU2-2P-201ENST00000410396 191 ntBASIC5.06□□□□□ -1.6
SH3RF1Q7Z6J0 RN7SKP202-201ENST00000410439 330 ntBASIC5.06□□□□□ -1.6
SH3RF1Q7Z6J0 AC011998.1-201ENST00000433403 117 ntBASIC5.06□□□□□ -1.6
SH3RF1Q7Z6J0 AC243964.1-201ENST00000441814 261 ntBASIC5.06□□□□□ -1.6
SH3RF1Q7Z6J0 AL358232.1-201ENST00000448030 501 ntBASIC5.06□□□□□ -1.6
SH3RF1Q7Z6J0 AC022795.1-201ENST00000473808 480 ntBASIC5.06□□□□□ -1.6
SH3RF1Q7Z6J0 RN7SL132P-201ENST00000478131 296 ntBASIC5.06□□□□□ -1.6
SH3RF1Q7Z6J0 SNORA31.20-201ENST00000517111 133 ntBASIC5.06□□□□□ -1.6
SH3RF1Q7Z6J0 RNU6-58P-201ENST00000517143 103 ntBASIC5.06□□□□□ -1.6
SH3RF1Q7Z6J0 RNU1-45P-201ENST00000517191 141 ntBASIC5.06□□□□□ -1.6
SH3RF1Q7Z6J0 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC5.06□□□□□ -1.6
SH3RF1Q7Z6J0 CYCSP26-201ENST00000534107 320 ntBASIC5.06□□□□□ -1.6
SH3RF1Q7Z6J0 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC5.06□□□□□ -1.6
SH3RF1Q7Z6J0 MIR4679-2-201ENST00000578358 77 ntBASIC5.06□□□□□ -1.6
SH3RF1Q7Z6J0 AC024220.1-201ENST00000603675 484 ntBASIC5.06□□□□□ -1.6
SH3RF1Q7Z6J0 RNU2-4P-201ENST00000606190 192 ntBASIC5.06□□□□□ -1.6
SH3RF1Q7Z6J0 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC5.06□□□□□ -1.6
SH3RF1Q7Z6J0 U2.15-201ENST00000611544 191 ntBASIC5.06□□□□□ -1.6
SH3RF1Q7Z6J0 U2.16-201ENST00000613119 191 ntBASIC5.06□□□□□ -1.6
SH3RF1Q7Z6J0 U2.12-201ENST00000613778 191 ntBASIC5.06□□□□□ -1.6
SH3RF1Q7Z6J0 Y_RNA.802-201ENST00000614892 130 ntBASIC5.06□□□□□ -1.6
SH3RF1Q7Z6J0 U2.9-201ENST00000615427 191 ntBASIC5.06□□□□□ -1.6
SH3RF1Q7Z6J0 U2.11-201ENST00000616345 191 ntBASIC5.06□□□□□ -1.6
SH3RF1Q7Z6J0 U2.2-201ENST00000616535 191 ntBASIC5.06□□□□□ -1.6
SH3RF1Q7Z6J0 U2.3-201ENST00000617785 191 ntBASIC5.06□□□□□ -1.6
SH3RF1Q7Z6J0 U2.19-201ENST00000618602 191 ntBASIC5.06□□□□□ -1.6
SH3RF1Q7Z6J0 RNU2-1-201ENST00000618664 191 ntBASIC5.06□□□□□ -1.6
SH3RF1Q7Z6J0 U2.6-201ENST00000619225 191 ntBASIC5.06□□□□□ -1.6
SH3RF1Q7Z6J0 U2.5-201ENST00000619465 191 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms