Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 RPL30P14-201ENST00000482744 348 ntBASIC3.54□□□□□ -1.84
KRT28Q7Z3Y7 AC092185.1-201ENST00000491371 97 ntBASIC3.54□□□□□ -1.84
KRT28Q7Z3Y7 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.54□□□□□ -1.84
KRT28Q7Z3Y7 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
KRT28Q7Z3Y7 CCDC34P1-201ENST00000507441 517 ntBASIC3.54□□□□□ -1.84
KRT28Q7Z3Y7 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.54□□□□□ -1.84
KRT28Q7Z3Y7 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.54□□□□□ -1.84
KRT28Q7Z3Y7 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.54□□□□□ -1.84
KRT28Q7Z3Y7 AC023050.3-201ENST00000541142 333 ntBASIC3.54□□□□□ -1.84
KRT28Q7Z3Y7 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.54□□□□□ -1.84
KRT28Q7Z3Y7 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.54□□□□□ -1.84
KRT28Q7Z3Y7 AC018638.8-201ENST00000588755 281 ntBASIC3.54□□□□□ -1.84
KRT28Q7Z3Y7 AC005046.1-201ENST00000608515 625 ntBASIC3.54□□□□□ -1.84
KRT28Q7Z3Y7 MIR7111-201ENST00000619751 72 ntBASIC3.54□□□□□ -1.84
KRT28Q7Z3Y7 AC092794.2-201ENST00000620933 563 ntBASIC3.54□□□□□ -1.84
KRT28Q7Z3Y7 AP003400.5-201ENST00000624827 617 ntBASIC3.54□□□□□ -1.84
KRT28Q7Z3Y7 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
KRT28Q7Z3Y7 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
KRT28Q7Z3Y7 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
KRT28Q7Z3Y7 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
KRT28Q7Z3Y7 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.53□□□□□ -1.84
KRT28Q7Z3Y7 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
KRT28Q7Z3Y7 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
KRT28Q7Z3Y7 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
KRT28Q7Z3Y7 RNU6-371P-201ENST00000364283 108 ntBASIC3.53□□□□□ -1.84
KRT28Q7Z3Y7 Y_RNA.279-201ENST00000364763 95 ntBASIC3.53□□□□□ -1.84
KRT28Q7Z3Y7 RNU6-867P-201ENST00000364956 107 ntBASIC3.53□□□□□ -1.84
KRT28Q7Z3Y7 RNU6-1179P-201ENST00000384667 107 ntBASIC3.53□□□□□ -1.84
KRT28Q7Z3Y7 MIR181A2-201ENST00000384863 110 ntBASIC3.53□□□□□ -1.84
KRT28Q7Z3Y7 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
KRT28Q7Z3Y7 RNA5SP219-201ENST00000390940 113 ntBASIC3.53□□□□□ -1.84
KRT28Q7Z3Y7 AC098614.3-201ENST00000438957 440 ntBASIC3.53□□□□□ -1.84
KRT28Q7Z3Y7 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.53□□□□□ -1.84
KRT28Q7Z3Y7 PRPS1P1-201ENST00000445305 876 ntBASIC3.53□□□□□ -1.84
KRT28Q7Z3Y7 IFNA11P-201ENST00000446352 526 ntBASIC3.53□□□□□ -1.84
KRT28Q7Z3Y7 RPL12P25-201ENST00000455592 494 ntBASIC3.53□□□□□ -1.84
KRT28Q7Z3Y7 Y_RNA.654-201ENST00000497848 106 ntBASIC3.53□□□□□ -1.84
KRT28Q7Z3Y7 MTCO2P30-201ENST00000503662 364 ntBASIC3.53□□□□□ -1.84
KRT28Q7Z3Y7 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.53□□□□□ -1.84
KRT28Q7Z3Y7 AC010265.1-201ENST00000513509 211 ntBASIC3.53□□□□□ -1.84
KRT28Q7Z3Y7 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.53□□□□□ -1.84
KRT28Q7Z3Y7 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.53□□□□□ -1.84
KRT28Q7Z3Y7 AC084851.1-201ENST00000529105 249 ntBASIC3.53□□□□□ -1.84
KRT28Q7Z3Y7 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.53□□□□□ -1.84
KRT28Q7Z3Y7 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.53□□□□□ -1.84
KRT28Q7Z3Y7 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.53□□□□□ -1.84
KRT28Q7Z3Y7 AC012119.1-201ENST00000603184 222 ntBASIC3.53□□□□□ -1.84
KRT28Q7Z3Y7 AC092747.3-201ENST00000603769 301 ntBASIC3.53□□□□□ -1.84
KRT28Q7Z3Y7 AC007938.3-201ENST00000604965 623 ntBASIC3.53□□□□□ -1.84
KRT28Q7Z3Y7 AC092807.2-201ENST00000609367 243 ntBASIC3.53□□□□□ -1.84
KRT28Q7Z3Y7 AC090617.10-201ENST00000624308 134 ntBASIC3.53□□□□□ -1.84
KRT28Q7Z3Y7 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.53□□□□□ -1.84
KRT28Q7Z3Y7 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
KRT28Q7Z3Y7 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
KRT28Q7Z3Y7 AC002546.1-201ENST00000588041 2504 ntBASIC3.52□□□□□ -1.85
KRT28Q7Z3Y7 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.52□□□□□ -1.85
KRT28Q7Z3Y7 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
KRT28Q7Z3Y7 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
KRT28Q7Z3Y7 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.52□□□□□ -1.85
KRT28Q7Z3Y7 Y_RNA.72-201ENST00000362894 103 ntBASIC3.52□□□□□ -1.85
KRT28Q7Z3Y7 RNU6-82P-201ENST00000363970 107 ntBASIC3.52□□□□□ -1.85
KRT28Q7Z3Y7 MIR578-201ENST00000384828 96 ntBASIC3.52□□□□□ -1.85
KRT28Q7Z3Y7 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.52□□□□□ -1.85
KRT28Q7Z3Y7 SNORA16.2-201ENST00000390991 127 ntBASIC3.52□□□□□ -1.85
KRT28Q7Z3Y7 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.52□□□□□ -1.85
KRT28Q7Z3Y7 POLHP1-201ENST00000411806 470 ntBASIC3.52□□□□□ -1.85
KRT28Q7Z3Y7 BX682237.1-201ENST00000415016 335 ntBASIC3.52□□□□□ -1.85
KRT28Q7Z3Y7 AL590664.1-201ENST00000448065 339 ntBASIC3.52□□□□□ -1.85
KRT28Q7Z3Y7 MTND5P20-201ENST00000448677 143 ntBASIC3.52□□□□□ -1.85
KRT28Q7Z3Y7 SSXP4-201ENST00000451349 245 ntBASIC3.52□□□□□ -1.85
KRT28Q7Z3Y7 RNU6-1208P-201ENST00000459588 107 ntBASIC3.52□□□□□ -1.85
KRT28Q7Z3Y7 AP000852.1-201ENST00000472460 573 ntBASIC3.52□□□□□ -1.85
KRT28Q7Z3Y7 RN7SL636P-201ENST00000497504 294 ntBASIC3.52□□□□□ -1.85
KRT28Q7Z3Y7 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.52□□□□□ -1.85
KRT28Q7Z3Y7 AC009901.1-201ENST00000506703 541 ntBASIC3.52□□□□□ -1.85
KRT28Q7Z3Y7 RNU2-69P-201ENST00000516061 100 ntBASIC3.52□□□□□ -1.85
KRT28Q7Z3Y7 BTF3P12-201ENST00000519620 469 ntBASIC3.52□□□□□ -1.85
KRT28Q7Z3Y7 AP000763.2-201ENST00000540641 163 ntBASIC3.52□□□□□ -1.85
KRT28Q7Z3Y7 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.52□□□□□ -1.85
KRT28Q7Z3Y7 AL118558.2-201ENST00000556294 238 ntBASIC3.52□□□□□ -1.85
KRT28Q7Z3Y7 MTCO3P23-201ENST00000561363 289 ntBASIC3.52□□□□□ -1.85
KRT28Q7Z3Y7 MIR3609-201ENST00000582661 80 ntBASIC3.52□□□□□ -1.85
KRT28Q7Z3Y7 MIR4635-201ENST00000583759 79 ntBASIC3.52□□□□□ -1.85
KRT28Q7Z3Y7 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.52□□□□□ -1.85
KRT28Q7Z3Y7 AC068831.7-201ENST00000616954 363 ntBASIC3.52□□□□□ -1.85
KRT28Q7Z3Y7 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
KRT28Q7Z3Y7 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.52□□□□□ -1.85
KRT28Q7Z3Y7 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.52□□□□□ -1.85
KRT28Q7Z3Y7 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.52□□□□□ -1.85
KRT28Q7Z3Y7 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
KRT28Q7Z3Y7 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
KRT28Q7Z3Y7 CBX3P1-201ENST00000325243 554 ntBASIC3.51□□□□□ -1.85
KRT28Q7Z3Y7 Y_RNA.100-201ENST00000363141 102 ntBASIC3.51□□□□□ -1.85
KRT28Q7Z3Y7 Y_RNA.167-201ENST00000363735 109 ntBASIC3.51□□□□□ -1.85
KRT28Q7Z3Y7 RNU6-522P-201ENST00000364497 107 ntBASIC3.51□□□□□ -1.85
KRT28Q7Z3Y7 RNU6-217P-201ENST00000384164 104 ntBASIC3.51□□□□□ -1.85
KRT28Q7Z3Y7 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
KRT28Q7Z3Y7 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.51□□□□□ -1.85
KRT28Q7Z3Y7 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.51□□□□□ -1.85
KRT28Q7Z3Y7 AL669831.1-202ENST00000428504 417 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms