Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AP000943.4-201ENST00000622912 357 ntBASIC-0.21□□□□□ -2.44
VPS13CQ709C8 ZNF663P-202ENST00000641770 1131 ntBASIC-0.21□□□□□ -2.44
VPS13CQ709C8 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.21□□□□□ -2.44
VPS13CQ709C8 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC-0.21□□□□□ -2.44
VPS13CQ709C8 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.21□□□□□ -2.44
VPS13CQ709C8 MIR605-201ENST00000385078 83 ntBASIC-0.21□□□□□ -2.44
VPS13CQ709C8 AL590556.1-201ENST00000423231 483 ntBASIC-0.21□□□□□ -2.44
VPS13CQ709C8 SNRPGP6-201ENST00000451124 220 ntBASIC-0.21□□□□□ -2.44
VPS13CQ709C8 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC-0.21□□□□□ -2.44
VPS13CQ709C8 RN7SKP277-201ENST00000516895 283 ntBASIC-0.21□□□□□ -2.44
VPS13CQ709C8 UCA1.1-201ENST00000620952 75 ntBASIC-0.21□□□□□ -2.44
VPS13CQ709C8 ZFAND6P1-201ENST00000434138 605 ntBASIC-0.21□□□□□ -2.44
VPS13CQ709C8 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC-0.21□□□□□ -2.44
VPS13CQ709C8 CIR1P1-201ENST00000524055 1133 ntBASIC-0.21□□□□□ -2.44
VPS13CQ709C8 AC073544.2-201ENST00000601155 540 ntBASIC-0.21□□□□□ -2.44
VPS13CQ709C8 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC-0.21□□□□□ -2.44
VPS13CQ709C8 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC-0.22□□□□□ -2.44
VPS13CQ709C8 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC-0.22□□□□□ -2.44
VPS13CQ709C8 AL353777.1-201ENST00000425552 326 ntBASIC-0.22□□□□□ -2.44
VPS13CQ709C8 AC022022.1-201ENST00000430304 178 ntBASIC-0.22□□□□□ -2.44
VPS13CQ709C8 AC087879.1-201ENST00000474343 374 ntBASIC-0.22□□□□□ -2.44
VPS13CQ709C8 AL133241.1-201ENST00000556832 487 ntBASIC-0.22□□□□□ -2.44
VPS13CQ709C8 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC-0.22□□□□□ -2.44
VPS13CQ709C8 AC068790.6-201ENST00000602558 258 ntBASIC-0.22□□□□□ -2.44
VPS13CQ709C8 AC020923.1-201ENST00000624021 917 ntBASIC-0.22□□□□□ -2.44
VPS13CQ709C8 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC-0.22□□□□□ -2.44
VPS13CQ709C8 RPL18AP17-201ENST00000455326 198 ntBASIC-0.22□□□□□ -2.44
VPS13CQ709C8 AC112492.4-201ENST00000456549 352 ntBASIC-0.22□□□□□ -2.44
VPS13CQ709C8 RNU2-12P-201ENST00000517216 168 ntBASIC-0.22□□□□□ -2.44
VPS13CQ709C8 AP003034.1-201ENST00000534621 422 ntBASIC-0.22□□□□□ -2.44
VPS13CQ709C8 AC087897.1-201ENST00000550134 156 ntBASIC-0.22□□□□□ -2.44
VPS13CQ709C8 MIR424-201ENST00000362227 98 ntBASIC-0.22□□□□□ -2.45
VPS13CQ709C8 MIRLET7D-201ENST00000362263 87 ntBASIC-0.22□□□□□ -2.45
VPS13CQ709C8 RNY4P7-201ENST00000364600 96 ntBASIC-0.22□□□□□ -2.45
VPS13CQ709C8 MIR92A2-201ENST00000385299 75 ntBASIC-0.22□□□□□ -2.45
VPS13CQ709C8 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.22□□□□□ -2.45
VPS13CQ709C8 MTND4P20-201ENST00000424125 869 ntBASIC-0.22□□□□□ -2.45
VPS13CQ709C8 RPL7L1P10-201ENST00000427790 463 ntBASIC-0.22□□□□□ -2.45
VPS13CQ709C8 GAPDHP17-201ENST00000449858 1001 ntBASIC-0.22□□□□□ -2.45
VPS13CQ709C8 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.22□□□□□ -2.45
VPS13CQ709C8 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC-0.22□□□□□ -2.45
VPS13CQ709C8 AC021146.9-201ENST00000512503 156 ntBASIC-0.22□□□□□ -2.45
VPS13CQ709C8 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC-0.22□□□□□ -2.45
VPS13CQ709C8 AL590229.1-201ENST00000603497 542 ntBASIC-0.22□□□□□ -2.45
VPS13CQ709C8 Y_RNA.86-201ENST00000363020 111 ntBASIC-0.23□□□□□ -2.45
VPS13CQ709C8 USP9YP26-201ENST00000421008 661 ntBASIC-0.23□□□□□ -2.45
VPS13CQ709C8 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC-0.23□□□□□ -2.45
VPS13CQ709C8 USP9YP18-201ENST00000425912 695 ntBASIC-0.23□□□□□ -2.45
VPS13CQ709C8 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC-0.23□□□□□ -2.45
VPS13CQ709C8 USP9YP24-201ENST00000434374 697 ntBASIC-0.23□□□□□ -2.45
VPS13CQ709C8 USP9YP17-201ENST00000444617 696 ntBASIC-0.23□□□□□ -2.45
VPS13CQ709C8 AP000797.1-201ENST00000478870 387 ntBASIC-0.23□□□□□ -2.45
VPS13CQ709C8 AC093534.1-201ENST00000504977 132 ntBASIC-0.23□□□□□ -2.45
VPS13CQ709C8 SNORD39.2-201ENST00000579995 76 ntBASIC-0.23□□□□□ -2.45
VPS13CQ709C8 U1.36-201ENST00000620684 176 ntBASIC-0.23□□□□□ -2.45
VPS13CQ709C8 AC106858.1-201ENST00000637497 429 ntBASIC-0.23□□□□□ -2.45
VPS13CQ709C8 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC-0.23□□□□□ -2.45
VPS13CQ709C8 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.23□□□□□ -2.45
VPS13CQ709C8 RNU2-7P-201ENST00000410794 178 ntBASIC-0.23□□□□□ -2.45
VPS13CQ709C8 AC099677.1-201ENST00000420575 175 ntBASIC-0.23□□□□□ -2.45
VPS13CQ709C8 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC-0.23□□□□□ -2.45
VPS13CQ709C8 AC007363.1-201ENST00000604736 620 ntBASIC-0.23□□□□□ -2.45
VPS13CQ709C8 AC106900.2-201ENST00000604994 317 ntBASIC-0.23□□□□□ -2.45
VPS13CQ709C8 SNORA40.12-201ENST00000516329 111 ntBASIC-0.23□□□□□ -2.45
VPS13CQ709C8 ZNF92P3-201ENST00000596594 954 ntBASIC-0.23□□□□□ -2.45
VPS13CQ709C8 RNA5SP128-201ENST00000365305 116 ntBASIC-0.24□□□□□ -2.45
VPS13CQ709C8 MTCO2P12-201ENST00000427426 682 ntBASIC-0.24□□□□□ -2.45
VPS13CQ709C8 BX248409.1-201ENST00000455497 255 ntBASIC-0.24□□□□□ -2.45
VPS13CQ709C8 MIR892C-201ENST00000516410 77 ntBASIC-0.24□□□□□ -2.45
VPS13CQ709C8 SNORA31.22-201ENST00000517204 135 ntBASIC-0.24□□□□□ -2.45
VPS13CQ709C8 RNU6-902P-201ENST00000517212 91 ntBASIC-0.24□□□□□ -2.45
VPS13CQ709C8 RAB11AP2-201ENST00000545905 639 ntBASIC-0.24□□□□□ -2.45
VPS13CQ709C8 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC-0.24□□□□□ -2.45
VPS13CQ709C8 AC069304.2-201ENST00000605154 435 ntBASIC-0.24□□□□□ -2.45
VPS13CQ709C8 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC-0.24□□□□□ -2.45
VPS13CQ709C8 MIR8074-201ENST00000615081 81 ntBASIC-0.24□□□□□ -2.45
VPS13CQ709C8 uc_338.36-201ENST00000622331 158 ntBASIC-0.24□□□□□ -2.45
VPS13CQ709C8 Y_RNA.228-201ENST00000364346 98 ntBASIC-0.24□□□□□ -2.45
VPS13CQ709C8 RNU6-152P-201ENST00000384037 107 ntBASIC-0.24□□□□□ -2.45
VPS13CQ709C8 MIR644A-201ENST00000385262 94 ntBASIC-0.24□□□□□ -2.45
VPS13CQ709C8 CALM2P3-201ENST00000400429 449 ntBASIC-0.24□□□□□ -2.45
VPS13CQ709C8 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC-0.24□□□□□ -2.45
VPS13CQ709C8 AC004923.2-201ENST00000529649 369 ntBASIC-0.24□□□□□ -2.45
VPS13CQ709C8 HSPE1P7-201ENST00000604681 321 ntBASIC-0.24□□□□□ -2.45
VPS13CQ709C8 AL078604.3-201ENST00000615580 211 ntBASIC-0.24□□□□□ -2.45
VPS13CQ709C8 MIR548AZ-201ENST00000616567 95 ntBASIC-0.24□□□□□ -2.45
VPS13CQ709C8 RNU6-271P-201ENST00000363858 105 ntBASIC-0.24□□□□□ -2.45
VPS13CQ709C8 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC-0.24□□□□□ -2.45
VPS13CQ709C8 RPS15AP27-201ENST00000449183 343 ntBASIC-0.24□□□□□ -2.45
VPS13CQ709C8 AC010409.1-201ENST00000487382 476 ntBASIC-0.24□□□□□ -2.45
VPS13CQ709C8 AC105758.1-201ENST00000506038 399 ntBASIC-0.24□□□□□ -2.45
VPS13CQ709C8 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.24□□□□□ -2.45
VPS13CQ709C8 AC022254.1-201ENST00000567857 235 ntBASIC-0.24□□□□□ -2.45
VPS13CQ709C8 MTCYBP22-201ENST00000603788 447 ntBASIC-0.24□□□□□ -2.45
VPS13CQ709C8 HMGN2P39-201ENST00000398005 273 ntBASIC-0.25□□□□□ -2.45
VPS13CQ709C8 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC-0.25□□□□□ -2.45
VPS13CQ709C8 RNA5SP255-201ENST00000516370 107 ntBASIC-0.25□□□□□ -2.45
VPS13CQ709C8 SNORD114-9-201ENST00000364370 72 ntBASIC-0.25□□□□□ -2.45
VPS13CQ709C8 AC243964.1-201ENST00000441814 261 ntBASIC-0.25□□□□□ -2.45
VPS13CQ709C8 FCF1P6-201ENST00000456841 595 ntBASIC-0.25□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms