Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 RNU6-953P-201ENST00000459154 107 ntBASIC3.06□□□□□ -1.92
ZNF549Q6P9A3 RN7SL75P-201ENST00000461926 281 ntBASIC3.06□□□□□ -1.92
ZNF549Q6P9A3 AP002884.2-201ENST00000471647 395 ntBASIC3.06□□□□□ -1.92
ZNF549Q6P9A3 RPL32P34-201ENST00000486380 400 ntBASIC3.06□□□□□ -1.92
ZNF549Q6P9A3 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
ZNF549Q6P9A3 MTND3P25-201ENST00000509243 135 ntBASIC3.06□□□□□ -1.92
ZNF549Q6P9A3 AC096745.1-201ENST00000509945 370 ntBASIC3.06□□□□□ -1.92
ZNF549Q6P9A3 AC074250.1-201ENST00000511117 192 ntBASIC3.06□□□□□ -1.92
ZNF549Q6P9A3 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.06□□□□□ -1.92
ZNF549Q6P9A3 AC009902.1-201ENST00000519351 183 ntBASIC3.06□□□□□ -1.92
ZNF549Q6P9A3 SNRPGP16-201ENST00000533275 226 ntBASIC3.06□□□□□ -1.92
ZNF549Q6P9A3 AC026371.1-201ENST00000551867 419 ntBASIC3.06□□□□□ -1.92
ZNF549Q6P9A3 MIR5680-201ENST00000577577 84 ntBASIC3.06□□□□□ -1.92
ZNF549Q6P9A3 LRRC37A5P-203ENST00000580181 585 ntBASIC3.06□□□□□ -1.92
ZNF549Q6P9A3 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.06□□□□□ -1.92
ZNF549Q6P9A3 BDH2P1-201ENST00000602288 736 ntBASIC3.06□□□□□ -1.92
ZNF549Q6P9A3 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.06□□□□□ -1.92
ZNF549Q6P9A3 AC011890.2-201ENST00000613393 294 ntBASIC3.06□□□□□ -1.92
ZNF549Q6P9A3 AC034102.8-201ENST00000615146 484 ntBASIC3.06□□□□□ -1.92
ZNF549Q6P9A3 AC087588.2-201ENST00000617667 426 ntBASIC3.06□□□□□ -1.92
ZNF549Q6P9A3 AC093831.2-201ENST00000624393 3427 ntBASIC3.06□□□□□ -1.92
ZNF549Q6P9A3 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
ZNF549Q6P9A3 AC073325.2-201ENST00000339545 159 ntBASIC3.05□□□□□ -1.92
ZNF549Q6P9A3 RNU6-600P-201ENST00000362524 99 ntBASIC3.05□□□□□ -1.92
ZNF549Q6P9A3 RNU6-1074P-201ENST00000383995 104 ntBASIC3.05□□□□□ -1.92
ZNF549Q6P9A3 RNU6-842P-201ENST00000384269 107 ntBASIC3.05□□□□□ -1.92
ZNF549Q6P9A3 RNU6-196P-201ENST00000384315 107 ntBASIC3.05□□□□□ -1.92
ZNF549Q6P9A3 RNU6-331P-201ENST00000384724 107 ntBASIC3.05□□□□□ -1.92
ZNF549Q6P9A3 Y_RNA.645-201ENST00000391229 102 ntBASIC3.05□□□□□ -1.92
ZNF549Q6P9A3 HMGB3P2-201ENST00000411913 584 ntBASIC3.05□□□□□ -1.92
ZNF549Q6P9A3 TOMM22P1-201ENST00000418578 312 ntBASIC3.05□□□□□ -1.92
ZNF549Q6P9A3 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.05□□□□□ -1.92
ZNF549Q6P9A3 VDAC1P3-201ENST00000434069 851 ntBASIC3.05□□□□□ -1.92
ZNF549Q6P9A3 HMGB1P12-201ENST00000438594 598 ntBASIC3.05□□□□□ -1.92
ZNF549Q6P9A3 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.05□□□□□ -1.92
ZNF549Q6P9A3 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.05□□□□□ -1.92
ZNF549Q6P9A3 RPS24P13-201ENST00000442520 397 ntBASIC3.05□□□□□ -1.92
ZNF549Q6P9A3 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.05□□□□□ -1.92
ZNF549Q6P9A3 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
ZNF549Q6P9A3 GSTA11P-201ENST00000452866 669 ntBASIC3.05□□□□□ -1.92
ZNF549Q6P9A3 RNU7-187P-201ENST00000458985 68 ntBASIC3.05□□□□□ -1.92
ZNF549Q6P9A3 MTATP8P1-201ENST00000467115 207 ntBASIC3.05□□□□□ -1.92
ZNF549Q6P9A3 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.05□□□□□ -1.92
ZNF549Q6P9A3 HSPE1P6-201ENST00000479457 291 ntBASIC3.05□□□□□ -1.92
ZNF549Q6P9A3 HMGB1P22-201ENST00000505315 124 ntBASIC3.05□□□□□ -1.92
ZNF549Q6P9A3 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.05□□□□□ -1.92
ZNF549Q6P9A3 MTCO2P24-201ENST00000515611 426 ntBASIC3.05□□□□□ -1.92
ZNF549Q6P9A3 RNU6-470P-201ENST00000515954 104 ntBASIC3.05□□□□□ -1.92
ZNF549Q6P9A3 RNU6-927P-201ENST00000516199 100 ntBASIC3.05□□□□□ -1.92
ZNF549Q6P9A3 RNA5SP471-201ENST00000516971 106 ntBASIC3.05□□□□□ -1.92
ZNF549Q6P9A3 RNU6-699P-201ENST00000517081 110 ntBASIC3.05□□□□□ -1.92
ZNF549Q6P9A3 RNU1-54P-201ENST00000517181 120 ntBASIC3.05□□□□□ -1.92
ZNF549Q6P9A3 RNA5SP380-201ENST00000517190 98 ntBASIC3.05□□□□□ -1.92
ZNF549Q6P9A3 RNU6-840P-201ENST00000517275 65 ntBASIC3.05□□□□□ -1.92
ZNF549Q6P9A3 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.05□□□□□ -1.92
ZNF549Q6P9A3 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.05□□□□□ -1.92
ZNF549Q6P9A3 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.05□□□□□ -1.92
ZNF549Q6P9A3 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.05□□□□□ -1.92
ZNF549Q6P9A3 MIR3690-201ENST00000580266 75 ntBASIC3.05□□□□□ -1.92
ZNF549Q6P9A3 ELOCP5-201ENST00000604924 333 ntBASIC3.05□□□□□ -1.92
ZNF549Q6P9A3 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.05□□□□□ -1.92
ZNF549Q6P9A3 AC138305.3-201ENST00000624988 240 ntBASIC3.05□□□□□ -1.92
ZNF549Q6P9A3 U6.98-201ENST00000637157 84 ntBASIC3.05□□□□□ -1.92
ZNF549Q6P9A3 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.05□□□□□ -1.92
ZNF549Q6P9A3 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
ZNF549Q6P9A3 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
ZNF549Q6P9A3 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.04□□□□□ -1.92
ZNF549Q6P9A3 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
ZNF549Q6P9A3 RNA5SP387-201ENST00000364226 106 ntBASIC3.04□□□□□ -1.92
ZNF549Q6P9A3 SNORA54-201ENST00000384281 123 ntBASIC3.04□□□□□ -1.92
ZNF549Q6P9A3 RNU6-607P-201ENST00000411283 108 ntBASIC3.04□□□□□ -1.92
ZNF549Q6P9A3 AL158156.1-201ENST00000422509 473 ntBASIC3.04□□□□□ -1.92
ZNF549Q6P9A3 AC008267.5-201ENST00000424928 265 ntBASIC3.04□□□□□ -1.92
ZNF549Q6P9A3 AL645568.3-201ENST00000433683 316 ntBASIC3.04□□□□□ -1.92
ZNF549Q6P9A3 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.04□□□□□ -1.92
ZNF549Q6P9A3 AL121871.1-201ENST00000443413 436 ntBASIC3.04□□□□□ -1.92
ZNF549Q6P9A3 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.04□□□□□ -1.92
ZNF549Q6P9A3 RPS24P6-201ENST00000452670 400 ntBASIC3.04□□□□□ -1.92
ZNF549Q6P9A3 RPL12P25-201ENST00000455592 494 ntBASIC3.04□□□□□ -1.92
ZNF549Q6P9A3 snoU13.24-201ENST00000458998 104 ntBASIC3.04□□□□□ -1.92
ZNF549Q6P9A3 RNU7-138P-201ENST00000459479 64 ntBASIC3.04□□□□□ -1.92
ZNF549Q6P9A3 RPL37P6-201ENST00000460682 294 ntBASIC3.04□□□□□ -1.92
ZNF549Q6P9A3 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.04□□□□□ -1.92
ZNF549Q6P9A3 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.04□□□□□ -1.92
ZNF549Q6P9A3 SNORA25.10-201ENST00000515926 124 ntBASIC3.04□□□□□ -1.92
ZNF549Q6P9A3 RNU6-764P-201ENST00000516396 105 ntBASIC3.04□□□□□ -1.92
ZNF549Q6P9A3 SCARNA16.2-201ENST00000516520 172 ntBASIC3.04□□□□□ -1.92
ZNF549Q6P9A3 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.04□□□□□ -1.92
ZNF549Q6P9A3 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.04□□□□□ -1.92
ZNF549Q6P9A3 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.04□□□□□ -1.92
ZNF549Q6P9A3 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.04□□□□□ -1.92
ZNF549Q6P9A3 VN1R107P-201ENST00000601784 209 ntBASIC3.04□□□□□ -1.92
ZNF549Q6P9A3 AC007179.3-201ENST00000604976 235 ntBASIC3.04□□□□□ -1.92
ZNF549Q6P9A3 AC006023.2-201ENST00000609916 167 ntBASIC3.04□□□□□ -1.92
ZNF549Q6P9A3 PISRT1.1-201ENST00000616930 107 ntBASIC3.04□□□□□ -1.92
ZNF549Q6P9A3 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.04□□□□□ -1.92
ZNF549Q6P9A3 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.04□□□□□ -1.92
ZNF549Q6P9A3 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.04□□□□□ -1.92
ZNF549Q6P9A3 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.04□□□□□ -1.92
ZNF549Q6P9A3 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 142.9 ms