Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AC138965.3-201ENST00000623875 498 ntBASIC5.42□□□□□ -1.54
VARS2Q5ST30 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
VARS2Q5ST30 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
VARS2Q5ST30 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VARS2Q5ST30 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
VARS2Q5ST30 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VARS2Q5ST30 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
VARS2Q5ST30 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.42□□□□□ -1.54
VARS2Q5ST30 AL672296.1-201ENST00000427780 2158 ntBASIC5.42□□□□□ -1.54
VARS2Q5ST30 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
VARS2Q5ST30 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VARS2Q5ST30 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VARS2Q5ST30 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VARS2Q5ST30 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VARS2Q5ST30 MAPK10-328ENST00000641553 4009 ntBASIC5.41□□□□□ -1.54
VARS2Q5ST30 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
VARS2Q5ST30 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
VARS2Q5ST30 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
VARS2Q5ST30 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VARS2Q5ST30 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VARS2Q5ST30 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VARS2Q5ST30 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VARS2Q5ST30 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VARS2Q5ST30 AC126755.2-208ENST00000327792 462 ntBASIC5.41□□□□□ -1.54
VARS2Q5ST30 AC138969.1-213ENST00000331436 462 ntBASIC5.41□□□□□ -1.54
VARS2Q5ST30 SNORA4.2-201ENST00000365313 147 ntBASIC5.41□□□□□ -1.54
VARS2Q5ST30 Y_RNA.437-201ENST00000384113 113 ntBASIC5.41□□□□□ -1.54
VARS2Q5ST30 RNU6-675P-201ENST00000384236 104 ntBASIC5.41□□□□□ -1.54
VARS2Q5ST30 RNU2-68P-201ENST00000410878 191 ntBASIC5.41□□□□□ -1.54
VARS2Q5ST30 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.41□□□□□ -1.54
VARS2Q5ST30 AC068287.1-201ENST00000430283 295 ntBASIC5.41□□□□□ -1.54
VARS2Q5ST30 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.41□□□□□ -1.54
VARS2Q5ST30 RNU7-171P-201ENST00000459581 62 ntBASIC5.41□□□□□ -1.54
VARS2Q5ST30 RN7SL354P-201ENST00000469282 294 ntBASIC5.41□□□□□ -1.54
VARS2Q5ST30 SNORA70.12-201ENST00000516084 153 ntBASIC5.41□□□□□ -1.54
VARS2Q5ST30 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.41□□□□□ -1.54
VARS2Q5ST30 MIR4675-201ENST00000577898 77 ntBASIC5.41□□□□□ -1.54
VARS2Q5ST30 MIR5588-201ENST00000581890 63 ntBASIC5.41□□□□□ -1.54
VARS2Q5ST30 AC007229.1-201ENST00000590455 412 ntBASIC5.41□□□□□ -1.54
VARS2Q5ST30 U6.115-201ENST00000636045 103 ntBASIC5.41□□□□□ -1.54
VARS2Q5ST30 U6.99-201ENST00000637524 83 ntBASIC5.41□□□□□ -1.54
VARS2Q5ST30 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
VARS2Q5ST30 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
VARS2Q5ST30 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.41□□□□□ -1.54
VARS2Q5ST30 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
VARS2Q5ST30 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC5.41□□□□□ -1.54
VARS2Q5ST30 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
VARS2Q5ST30 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
VARS2Q5ST30 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.4□□□□□ -1.54
VARS2Q5ST30 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
VARS2Q5ST30 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
VARS2Q5ST30 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.4□□□□□ -1.54
VARS2Q5ST30 RNY4P6-201ENST00000363667 96 ntBASIC5.4□□□□□ -1.54
VARS2Q5ST30 SNORA70.2-201ENST00000364506 135 ntBASIC5.4□□□□□ -1.54
VARS2Q5ST30 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.4□□□□□ -1.54
VARS2Q5ST30 RNU2-50P-201ENST00000410494 143 ntBASIC5.4□□□□□ -1.54
VARS2Q5ST30 RNA5SP127-201ENST00000411051 133 ntBASIC5.4□□□□□ -1.54
VARS2Q5ST30 AC244670.1-201ENST00000436879 112 ntBASIC5.4□□□□□ -1.54
VARS2Q5ST30 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
VARS2Q5ST30 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.4□□□□□ -1.54
VARS2Q5ST30 AL451050.1-201ENST00000450126 415 ntBASIC5.4□□□□□ -1.54
VARS2Q5ST30 AC005921.1-201ENST00000510589 286 ntBASIC5.4□□□□□ -1.54
VARS2Q5ST30 RNA5SP236-201ENST00000516169 116 ntBASIC5.4□□□□□ -1.54
VARS2Q5ST30 SCARNA15.2-201ENST00000516409 127 ntBASIC5.4□□□□□ -1.54
VARS2Q5ST30 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.4□□□□□ -1.54
VARS2Q5ST30 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.4□□□□□ -1.54
VARS2Q5ST30 MIR1254-2-201ENST00000579553 63 ntBASIC5.4□□□□□ -1.54
VARS2Q5ST30 AC011471.1-201ENST00000585766 187 ntBASIC5.4□□□□□ -1.54
VARS2Q5ST30 AP003357.1-201ENST00000604497 148 ntBASIC5.4□□□□□ -1.54
VARS2Q5ST30 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
VARS2Q5ST30 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
VARS2Q5ST30 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
VARS2Q5ST30 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
VARS2Q5ST30 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
VARS2Q5ST30 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
VARS2Q5ST30 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VARS2Q5ST30 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.39□□□□□ -1.55
VARS2Q5ST30 AL672167.1-205ENST00000641112 3080 ntBASIC5.39□□□□□ -1.55
VARS2Q5ST30 Y_RNA.111-201ENST00000363248 100 ntBASIC5.39□□□□□ -1.55
VARS2Q5ST30 U3.15-201ENST00000365398 212 ntBASIC5.39□□□□□ -1.55
VARS2Q5ST30 SNORA2.3-201ENST00000383920 135 ntBASIC5.39□□□□□ -1.55
VARS2Q5ST30 GPS2P1-201ENST00000411761 986 ntBASIC5.39□□□□□ -1.55
VARS2Q5ST30 RN7SL319P-201ENST00000480656 221 ntBASIC5.39□□□□□ -1.55
VARS2Q5ST30 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.39□□□□□ -1.55
VARS2Q5ST30 RNU6-113P-201ENST00000516653 101 ntBASIC5.39□□□□□ -1.55
VARS2Q5ST30 AC134698.5-201ENST00000519444 336 ntBASIC5.39□□□□□ -1.55
VARS2Q5ST30 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.39□□□□□ -1.55
VARS2Q5ST30 MIR4284-201ENST00000578924 81 ntBASIC5.39□□□□□ -1.55
VARS2Q5ST30 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VARS2Q5ST30 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
VARS2Q5ST30 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VARS2Q5ST30 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VARS2Q5ST30 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.39□□□□□ -1.55
VARS2Q5ST30 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.39□□□□□ -1.55
VARS2Q5ST30 Z73965.1-201ENST00000623412 2297 ntBASIC5.39□□□□□ -1.55
VARS2Q5ST30 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VARS2Q5ST30 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VARS2Q5ST30 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VARS2Q5ST30 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VARS2Q5ST30 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms